| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406209
Identifier: 41406209
GI number: 41406209
Start: 121401
End: 122516
Strand: Direct
Name: 41406209
Synonym: MAP0111
Alternate gene names: NA
Gene position: 121401-122516 (Clockwise)
Preceding gene: 41406208
Following gene: 41406210
Centisome position: 2.51
GC content: 66.49
Gene sequence:
>1116_bases ATGACGTCCCGGCGACGCAAACTCATCGCCCTGGCTGCCGCCGCCGCGGCGCTGGCCGCCGTCGCCATCGGGGTGGTTGG CCACTACGTCAAGGCCCGCCTCGACACCATGACAGTGACGGCCCAATTCGACAGCGCCGCAGGCCTGTACGAGGGCAATG TCGTGGCGGTGCTCGGCATGCCGGTGGGCAAGGTCAGCAAGGTCACGTCCAAGGGCAGTTATGTGGAGGCCGAGCTGACG GTGGACAAGAAGGTGAAGATCCCCGCGGCGGTCCGCGCCGTCACCATCAGCACCTCGATCCTCACCGACCGCCAGGTGGA ACTGACGCCGCCGTATCGCGGCGGGCCGGTGCTGAAGAACCACGACACCATCGGGCTCACCCGGACCAAGACGCCGGTCG CCTTCGACCGGGTGCTCGACATGCTCGACAAGGTGTCCAAATCGCTCAAGGGCGACGGCAAAGGCGGCGGGCCGATCGCC GACGTGAGCGACGCGGCGGTGGCCATCACCGACGGGAACGGCAAGAAGATCCTGGCCGCCCTCGATGAGCTTTCCAAGGC GCTGCGCCTCAGCTCCGAGCGGGGCGTCACCACCCGCGAGCAGTTGACCACCATCATCACCGACCTCAGCTCGATCACCG AGGCCGCCGCGCGCAACGACGCCAAGGTGCGCGAATTCGGCTCCACCACCCGCCAGCTCAGCCAGATCCTGGCCGACGAG AAGTTCGGCACCGGCGCCACCGGCCGCACCATCAACCGCATCCTGGAAGAGGTCACCACGCTGATGGAGAACAACCGGGA CAACCTCAAACAGGCCGTCCGCAACGGCGACACCGCCGCCAAGACACTCGTCGACGATCAGCGCGGCGTGGCCGAGCTGC TCGACGTGCTGCCGCTGACCCTGGAAAACCTCTACAACACCGTCGACCAGAACAACGGCGCGATCCGGGTGCACGGCCTG CTCGACAAGGCGCTCACCGACAGCCAGTCCGCCAAGGAGCTGTGCAACCTGATGCATCTGCGCCAATTAGGTTGCAGCAC GGGCACGTTGCAGGACTACGGCCCCGACTTCGGGCTGACCTACATACTCGACGGTCTTTCGGCGATGGGGCAGTAG
Upstream 100 bases:
>100_bases AGTTCAACCTGCCCAACGGGCTGGCCATCGACTCGTGGATGTGCGCAATCAGCGGCCGGGCCAAGGAATTCAACATGATC CAGTACTTCAAGGACTGCAA
Downstream 100 bases:
>100_bases CGATGAAGGCAGGCAAGCGCAAGGCATTGGCGGTGGCGTGCAGCGCGGTCATGGCCAGCTCGGGTTGCGCCACCAACGGG CTGGCCAGCCTGCCGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; MCE-Family D; Secreted Protein; MCE Family Protein; MCE-Family Protein; Mce Family D; MCE-Family; Mammalian Cell Entry-Like Domain-Containing Protein; Mammalian Cell Entry Related Domain Protein; Virulence Factor MCE-Like Protein; Mce-Related Protein
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MTSRRRKLIALAAAAAALAAVAIGVVGHYVKARLDTMTVTAQFDSAAGLYEGNVVAVLGMPVGKVSKVTSKGSYVEAELT VDKKVKIPAAVRAVTISTSILTDRQVELTPPYRGGPVLKNHDTIGLTRTKTPVAFDRVLDMLDKVSKSLKGDGKGGGPIA DVSDAAVAITDGNGKKILAALDELSKALRLSSERGVTTREQLTTIITDLSSITEAAARNDAKVREFGSTTRQLSQILADE KFGTGATGRTINRILEEVTTLMENNRDNLKQAVRNGDTAAKTLVDDQRGVAELLDVLPLTLENLYNTVDQNNGAIRVHGL LDKALTDSQSAKELCNLMHLRQLGCSTGTLQDYGPDFGLTYILDGLSAMGQ
Sequences:
>Translated_371_residues MTSRRRKLIALAAAAAALAAVAIGVVGHYVKARLDTMTVTAQFDSAAGLYEGNVVAVLGMPVGKVSKVTSKGSYVEAELT VDKKVKIPAAVRAVTISTSILTDRQVELTPPYRGGPVLKNHDTIGLTRTKTPVAFDRVLDMLDKVSKSLKGDGKGGGPIA DVSDAAVAITDGNGKKILAALDELSKALRLSSERGVTTREQLTTIITDLSSITEAAARNDAKVREFGSTTRQLSQILADE KFGTGATGRTINRILEEVTTLMENNRDNLKQAVRNGDTAAKTLVDDQRGVAELLDVLPLTLENLYNTVDQNNGAIRVHGL LDKALTDSQSAKELCNLMHLRQLGCSTGTLQDYGPDFGLTYILDGLSAMGQ >Mature_370_residues TSRRRKLIALAAAAAALAAVAIGVVGHYVKARLDTMTVTAQFDSAAGLYEGNVVAVLGMPVGKVSKVTSKGSYVEAELTV DKKVKIPAAVRAVTISTSILTDRQVELTPPYRGGPVLKNHDTIGLTRTKTPVAFDRVLDMLDKVSKSLKGDGKGGGPIAD VSDAAVAITDGNGKKILAALDELSKALRLSSERGVTTREQLTTIITDLSSITEAAARNDAKVREFGSTTRQLSQILADEK FGTGATGRTINRILEEVTTLMENNRDNLKQAVRNGDTAAKTLVDDQRGVAELLDVLPLTLENLYNTVDQNNGAIRVHGLL DKALTDSQSAKELCNLMHLRQLGCSTGTLQDYGPDFGLTYILDGLSAMGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39420; Mature: 39288
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRRRKLIALAAAAAALAAVAIGVVGHYVKARLDTMTVTAQFDSAAGLYEGNVVAVLGM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECC PVGKVSKVTSKGSYVEAELTVDKKVKIPAAVRAVTISTSILTDRQVELTPPYRGGPVLKN CCCHHHHHHCCCCEEEEEEEECCCEECCHHHEEEEEEHHHCCCCEEEECCCCCCCCCCCC HDTIGLTRTKTPVAFDRVLDMLDKVSKSLKGDGKGGGPIADVSDAAVAITDGNGKKILAA CCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHH LDELSKALRLSSERGVTTREQLTTIITDLSSITEAAARNDAKVREFGSTTRQLSQILADE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC KFGTGATGRTINRILEEVTTLMENNRDNLKQAVRNGDTAAKTLVDDQRGVAELLDVLPLT CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH LENLYNTVDQNNGAIRVHGLLDKALTDSQSAKELCNLMHLRQLGCSTGTLQDYGPDFGLT HHHHHHHHHCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHH YILDGLSAMGQ HHHHHHHHHCC >Mature Secondary Structure TSRRRKLIALAAAAAALAAVAIGVVGHYVKARLDTMTVTAQFDSAAGLYEGNVVAVLGM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECC PVGKVSKVTSKGSYVEAELTVDKKVKIPAAVRAVTISTSILTDRQVELTPPYRGGPVLKN CCCHHHHHHCCCCEEEEEEEECCCEECCHHHEEEEEEHHHCCCCEEEECCCCCCCCCCCC HDTIGLTRTKTPVAFDRVLDMLDKVSKSLKGDGKGGGPIADVSDAAVAITDGNGKKILAA CCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHH LDELSKALRLSSERGVTTREQLTTIITDLSSITEAAARNDAKVREFGSTTRQLSQILADE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC KFGTGATGRTINRILEEVTTLMENNRDNLKQAVRNGDTAAKTLVDDQRGVAELLDVLPLT CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH LENLYNTVDQNNGAIRVHGLLDKALTDSQSAKELCNLMHLRQLGCSTGTLQDYGPDFGLT HHHHHHHHHCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHH YILDGLSAMGQ HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA