| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406210
Identifier: 41406210
GI number: 41406210
Start: 122519
End: 123751
Strand: Direct
Name: 41406210
Synonym: MAP0112
Alternate gene names: NA
Gene position: 122519-123751 (Clockwise)
Preceding gene: 41406209
Following gene: 41406211
Centisome position: 2.54
GC content: 70.64
Gene sequence:
>1233_bases ATGAAGGCAGGCAAGCGCAAGGCATTGGCGGTGGCGTGCAGCGCGGTCATGGCCAGCTCGGGTTGCGCCACCAACGGGCT GGCCAGCCTGCCGCTGCCGGCACCGGGGATCGGCTCGGGCGGATACCTGCTCAACGCCGTCTTCTCCAACGCGCTGAACC TGCCCGCCCACGCGAAGGTCAAACTTGCCGGCGCCGATGTGGGGCAGCTCGAATCGATGGTCGCGCGCAACTACACCGCG GTGACCACGCTGCGCATCATGGACGGTGTCCGGGTCCCCGTCGGCAGCACCGCGGAACTGCGTTCGGCCACCCCGCTCGG GGACGTGTTCGTCGCGATCAAGCCACCCGTCCCGGCCGATCCCAGCGCCCCGCTGCTCAAGGCCGGCGACACCATCGGGC TGCCGGCCACCCGCGCCGCCGCCACCGTGGAAAGCGTGCTCAGCTCGGCGGCCCTGCTCGTCAACGGCGGGGCGGTCCGC AACTTCACCAACATCGTCAACGGAGCCGGCAAGGCAACCGGCGACCAGGGCCGCGCCTTCGGCGACCTGATCAACCGGAC CAATTCGCTGCTGACCAAGCTCAATGCCCGCTCCGACCAAATCGACGCCGCAGTCACCGAAACGGCGGCGCTGGCCGACC GGTTGGACGCCAAGAACCAGGCGATCACCGACGTGCTGCGGGCCGTCGGCCCCGCCACCGACGTGCTGTCCGGCAACGCC GACGAGATCGCTGACGTGGTCGACGAACTCGGGGCCACCACCCGCCAGCTCTCCAAATTCCCGTCGATTGCCGGCACGGA CAAGACCGGCCGCAGCGTCATCAAGGACGCCAACGCCATCGCCGCCGCCTGGAACGACGTCGTGTTGAGCCCCGACACCA GCCTGGCCGGCCTGAACCGGCTGATCCCGCCGTTCGTGAAAGCCACGCCCAGCCAAGCCATCTCGGTCCGCGGCAGCTTC GACCGGCTGGTACTCGGATCCCGCCCCGGCACCGGCGCCGAGACCGGGGGCTTCAAGGGTGATCCGGCCTTCCACGGGCC GATGCGCCGCGACTGGAACTACCTGATCGGCTCGATCAAGTACGTGTTGTGGCGGCTGCAGGAACGGGTGGTGGGCCGCG GGCCGCAAACCCCGATGGGCCAGAGCCCGTGGACGCCGTCCGGTCCGCCGCTGCCGCCGGCCCCCGCCGGGCAGGCGCCC CCGGATCCCATGGTCCCGGAGCCACCGCGGTGA
Upstream 100 bases:
>100_bases TGCGCCAATTAGGTTGCAGCACGGGCACGTTGCAGGACTACGGCCCCGACTTCGGGCTGACCTACATACTCGACGGTCTT TCGGCGATGGGGCAGTAGCG
Downstream 100 bases:
>100_bases TCGACACCCTCGGCCGTCTCGTCGTCGGCGTGGTGAAAGCCGGCCACCGCCAACGGACCTGGCTGTCCGGGCTCGCCCTG CTGGTCGCGCTCGTGGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; MCE Family Protein; Secreted Protein; Mce Family Lipoe; Mammalian Cell Entry Related Domain Protein; MCE Family Lipoprotein LprM; MCE-Family F; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Related Protein; MCE Family LipoE; MCE-Family Lipoprotein LprL; Mammalian Cell Entry Related Domain-Containing Protein; MCE Family Lipoprotein; MCE-Family LipoE; Lipoprotein; Mce Family Protein Mce5E; MCE Family Lipoprotein LprK; Mce-Related Protein
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MKAGKRKALAVACSAVMASSGCATNGLASLPLPAPGIGSGGYLLNAVFSNALNLPAHAKVKLAGADVGQLESMVARNYTA VTTLRIMDGVRVPVGSTAELRSATPLGDVFVAIKPPVPADPSAPLLKAGDTIGLPATRAAATVESVLSSAALLVNGGAVR NFTNIVNGAGKATGDQGRAFGDLINRTNSLLTKLNARSDQIDAAVTETAALADRLDAKNQAITDVLRAVGPATDVLSGNA DEIADVVDELGATTRQLSKFPSIAGTDKTGRSVIKDANAIAAAWNDVVLSPDTSLAGLNRLIPPFVKATPSQAISVRGSF DRLVLGSRPGTGAETGGFKGDPAFHGPMRRDWNYLIGSIKYVLWRLQERVVGRGPQTPMGQSPWTPSGPPLPPAPAGQAP PDPMVPEPPR
Sequences:
>Translated_410_residues MKAGKRKALAVACSAVMASSGCATNGLASLPLPAPGIGSGGYLLNAVFSNALNLPAHAKVKLAGADVGQLESMVARNYTA VTTLRIMDGVRVPVGSTAELRSATPLGDVFVAIKPPVPADPSAPLLKAGDTIGLPATRAAATVESVLSSAALLVNGGAVR NFTNIVNGAGKATGDQGRAFGDLINRTNSLLTKLNARSDQIDAAVTETAALADRLDAKNQAITDVLRAVGPATDVLSGNA DEIADVVDELGATTRQLSKFPSIAGTDKTGRSVIKDANAIAAAWNDVVLSPDTSLAGLNRLIPPFVKATPSQAISVRGSF DRLVLGSRPGTGAETGGFKGDPAFHGPMRRDWNYLIGSIKYVLWRLQERVVGRGPQTPMGQSPWTPSGPPLPPAPAGQAP PDPMVPEPPR >Mature_410_residues MKAGKRKALAVACSAVMASSGCATNGLASLPLPAPGIGSGGYLLNAVFSNALNLPAHAKVKLAGADVGQLESMVARNYTA VTTLRIMDGVRVPVGSTAELRSATPLGDVFVAIKPPVPADPSAPLLKAGDTIGLPATRAAATVESVLSSAALLVNGGAVR NFTNIVNGAGKATGDQGRAFGDLINRTNSLLTKLNARSDQIDAAVTETAALADRLDAKNQAITDVLRAVGPATDVLSGNA DEIADVVDELGATTRQLSKFPSIAGTDKTGRSVIKDANAIAAAWNDVVLSPDTSLAGLNRLIPPFVKATPSQAISVRGSF DRLVLGSRPGTGAETGGFKGDPAFHGPMRRDWNYLIGSIKYVLWRLQERVVGRGPQTPMGQSPWTPSGPPLPPAPAGQAP PDPMVPEPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42060; Mature: 42060
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAGKRKALAVACSAVMASSGCATNGLASLPLPAPGIGSGGYLLNAVFSNALNLPAHAKV CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE KLAGADVGQLESMVARNYTAVTTLRIMDGVRVPVGSTAELRSATPLGDVFVAIKPPVPAD EECCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCC PSAPLLKAGDTIGLPATRAAATVESVLSSAALLVNGGAVRNFTNIVNGAGKATGDQGRAF CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCCCCCCCHHH GDLINRTNSLLTKLNARSDQIDAAVTETAALADRLDAKNQAITDVLRAVGPATDVLSGNA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCH DEIADVVDELGATTRQLSKFPSIAGTDKTGRSVIKDANAIAAAWNDVVLSPDTSLAGLNR HHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHH LIPPFVKATPSQAISVRGSFDRLVLGSRPGTGAETGGFKGDPAFHGPMRRDWNYLIGSIK HCCHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH YVLWRLQERVVGRGPQTPMGQSPWTPSGPPLPPAPAGQAPPDPMVPEPPR HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKAGKRKALAVACSAVMASSGCATNGLASLPLPAPGIGSGGYLLNAVFSNALNLPAHAKV CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE KLAGADVGQLESMVARNYTAVTTLRIMDGVRVPVGSTAELRSATPLGDVFVAIKPPVPAD EECCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCC PSAPLLKAGDTIGLPATRAAATVESVLSSAALLVNGGAVRNFTNIVNGAGKATGDQGRAF CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCCCCCCCHHH GDLINRTNSLLTKLNARSDQIDAAVTETAALADRLDAKNQAITDVLRAVGPATDVLSGNA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCH DEIADVVDELGATTRQLSKFPSIAGTDKTGRSVIKDANAIAAAWNDVVLSPDTSLAGLNR HHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHH LIPPFVKATPSQAISVRGSFDRLVLGSRPGTGAETGGFKGDPAFHGPMRRDWNYLIGSIK HCCHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH YVLWRLQERVVGRGPQTPMGQSPWTPSGPPLPPAPAGQAPPDPMVPEPPR HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA