Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41406208

Identifier: 41406208

GI number: 41406208

Start: 120358

End: 121404

Strand: Direct

Name: 41406208

Synonym: MAP0110

Alternate gene names: NA

Gene position: 120358-121404 (Clockwise)

Preceding gene: 41406207

Following gene: 41406209

Centisome position: 2.49

GC content: 65.23

Gene sequence:

>1047_bases
ATGGCTGACACACGCAAACTGCGGTGGCTGCGACGGCGCCCGCTGGAGTCCTACAACCGGACATGGCTCGGGCTGGCCGG
GCTGGTGGTGGTCGCCGTCCTGGTCGCGGTGTCGCTGGGAATCAAGCTGCTCGGCGTCGGATACACCCACTACACCGCCG
AATTCCTGCAAGCCGCAACGCTGCGGCCCGGCAACCCCATCACCGTCGCCGGCATCGAGGTCGGGCACGTCACCAGCATG
AAACTCGCCGGCGATCACGTCGAGGCCGGTCTGAGCGTGCGCGACAACGTGCCGCTGGGCAAGGACACCCGAGCGGTGAT
CAAGGTCATGACCATCCTCGGGTCGCGTTATCTGGAGTTGGTGCCCGACGGCCCGGGTTCCCTACCGGCCAACACGATCC
CGCTCGCCCACACCGAGGTGCCCTACGACCTGCAGTCGCTGCTGGAGGACGCCACCACCACCTTCGAGCAGGTCGACTCC
GACCAGTTCGCGCAGTCACTGGCCGTGCTGGGCAAGCAACTCGGCGGGGTGCCGCCGCTGGTACCTCAGGCCGTCGCCAA
CCTGCAGACGTTGTCGACGATCACCGCGGACCGGCGCGGCCAGCTGGGTGCGCTGCTGAAAAGCACTCAGCGCGTGGTCA
ATACGCTTCGCAATCAGCAGAGCAACATCGGGCATCTGATGGATCAGGGTCAGGATCTGCTCGGCCACCTGGTGGCGCGA
CAGGCCACCTTCCACGCCATGTTCGCGGCGCTGACCGAACTCGTGGACCAACTCGACAAGATCGTCGTCAACAACCGGCC
GATGCTCGACGAATTGTTCGCGAACCTGCACCAGCTGACCAACATGGTCGGCCAGCACGACGACCTGGTGCGCAACATCC
TGCAGGTCGCCCCGGTGACGCTGCGGGGCCTGACCAACGCCACCGGCTACGGCCCGGTCGTCGAGTTCAACCTGCCCAAC
GGGCTGGCCATCGACTCGTGGATGTGCGCAATCAGCGGCCGGGCCAAGGAATTCAACATGATCCAGTACTTCAAGGACTG
CAAATGA

Upstream 100 bases:

>100_bases
ATCACCACCTTCATCGTCAACGCGGCCACGCCCGGCAACGCGTATCCGATCACCACGAAAAACCTGGGGTGGCACACCCC
GCGATGCAGGAACATGGCCA

Downstream 100 bases:

>100_bases
CGTCCCGGCGACGCAAACTCATCGCCCTGGCTGCCGCCGCCGCGGCGCTGGCCGCCGTCGCCATCGGGGTGGTTGGCCAC
TACGTCAAGGCCCGCCTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family C; MCE-Family B; MCE-Family Protein; MCE Family Protein; Mce Family C; Mce-Related Protein; MCE-Family; Mammalian Cell Entry Related Domain Protein; Mce-Family C; MCE-Family F; Mce Family B; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob; Mce Family Protein Mce5C

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MADTRKLRWLRRRPLESYNRTWLGLAGLVVVAVLVAVSLGIKLLGVGYTHYTAEFLQAATLRPGNPITVAGIEVGHVTSM
KLAGDHVEAGLSVRDNVPLGKDTRAVIKVMTILGSRYLELVPDGPGSLPANTIPLAHTEVPYDLQSLLEDATTTFEQVDS
DQFAQSLAVLGKQLGGVPPLVPQAVANLQTLSTITADRRGQLGALLKSTQRVVNTLRNQQSNIGHLMDQGQDLLGHLVAR
QATFHAMFAALTELVDQLDKIVVNNRPMLDELFANLHQLTNMVGQHDDLVRNILQVAPVTLRGLTNATGYGPVVEFNLPN
GLAIDSWMCAISGRAKEFNMIQYFKDCK

Sequences:

>Translated_348_residues
MADTRKLRWLRRRPLESYNRTWLGLAGLVVVAVLVAVSLGIKLLGVGYTHYTAEFLQAATLRPGNPITVAGIEVGHVTSM
KLAGDHVEAGLSVRDNVPLGKDTRAVIKVMTILGSRYLELVPDGPGSLPANTIPLAHTEVPYDLQSLLEDATTTFEQVDS
DQFAQSLAVLGKQLGGVPPLVPQAVANLQTLSTITADRRGQLGALLKSTQRVVNTLRNQQSNIGHLMDQGQDLLGHLVAR
QATFHAMFAALTELVDQLDKIVVNNRPMLDELFANLHQLTNMVGQHDDLVRNILQVAPVTLRGLTNATGYGPVVEFNLPN
GLAIDSWMCAISGRAKEFNMIQYFKDCK
>Mature_347_residues
ADTRKLRWLRRRPLESYNRTWLGLAGLVVVAVLVAVSLGIKLLGVGYTHYTAEFLQAATLRPGNPITVAGIEVGHVTSMK
LAGDHVEAGLSVRDNVPLGKDTRAVIKVMTILGSRYLELVPDGPGSLPANTIPLAHTEVPYDLQSLLEDATTTFEQVDSD
QFAQSLAVLGKQLGGVPPLVPQAVANLQTLSTITADRRGQLGALLKSTQRVVNTLRNQQSNIGHLMDQGQDLLGHLVARQ
ATFHAMFAALTELVDQLDKIVVNNRPMLDELFANLHQLTNMVGQHDDLVRNILQVAPVTLRGLTNATGYGPVVEFNLPNG
LAIDSWMCAISGRAKEFNMIQYFKDCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37882; Mature: 37751

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTRKLRWLRRRPLESYNRTWLGLAGLVVVAVLVAVSLGIKLLGVGYTHYTAEFLQAAT
CCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCHHHEECCHHHHHHHHHHHHH
LRPGNPITVAGIEVGHVTSMKLAGDHVEAGLSVRDNVPLGKDTRAVIKVMTILGSRYLEL
CCCCCCEEEEEEEECCEEEEHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEE
VPDGPGSLPANTIPLAHTEVPYDLQSLLEDATTTFEQVDSDQFAQSLAVLGKQLGGVPPL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH
VPQAVANLQTLSTITADRRGQLGALLKSTQRVVNTLRNQQSNIGHLMDQGQDLLGHLVAR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QATFHAMFAALTELVDQLDKIVVNNRPMLDELFANLHQLTNMVGQHDDLVRNILQVAPVT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHH
LRGLTNATGYGPVVEFNLPNGLAIDSWMCAISGRAKEFNMIQYFKDCK
HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
ADTRKLRWLRRRPLESYNRTWLGLAGLVVVAVLVAVSLGIKLLGVGYTHYTAEFLQAAT
CCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCHHHEECCHHHHHHHHHHHHH
LRPGNPITVAGIEVGHVTSMKLAGDHVEAGLSVRDNVPLGKDTRAVIKVMTILGSRYLEL
CCCCCCEEEEEEEECCEEEEHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEE
VPDGPGSLPANTIPLAHTEVPYDLQSLLEDATTTFEQVDSDQFAQSLAVLGKQLGGVPPL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH
VPQAVANLQTLSTITADRRGQLGALLKSTQRVVNTLRNQQSNIGHLMDQGQDLLGHLVAR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QATFHAMFAALTELVDQLDKIVVNNRPMLDELFANLHQLTNMVGQHDDLVRNILQVAPVT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHH
LRGLTNATGYGPVVEFNLPNGLAIDSWMCAISGRAKEFNMIQYFKDCK
HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA