| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406208
Identifier: 41406208
GI number: 41406208
Start: 120358
End: 121404
Strand: Direct
Name: 41406208
Synonym: MAP0110
Alternate gene names: NA
Gene position: 120358-121404 (Clockwise)
Preceding gene: 41406207
Following gene: 41406209
Centisome position: 2.49
GC content: 65.23
Gene sequence:
>1047_bases ATGGCTGACACACGCAAACTGCGGTGGCTGCGACGGCGCCCGCTGGAGTCCTACAACCGGACATGGCTCGGGCTGGCCGG GCTGGTGGTGGTCGCCGTCCTGGTCGCGGTGTCGCTGGGAATCAAGCTGCTCGGCGTCGGATACACCCACTACACCGCCG AATTCCTGCAAGCCGCAACGCTGCGGCCCGGCAACCCCATCACCGTCGCCGGCATCGAGGTCGGGCACGTCACCAGCATG AAACTCGCCGGCGATCACGTCGAGGCCGGTCTGAGCGTGCGCGACAACGTGCCGCTGGGCAAGGACACCCGAGCGGTGAT CAAGGTCATGACCATCCTCGGGTCGCGTTATCTGGAGTTGGTGCCCGACGGCCCGGGTTCCCTACCGGCCAACACGATCC CGCTCGCCCACACCGAGGTGCCCTACGACCTGCAGTCGCTGCTGGAGGACGCCACCACCACCTTCGAGCAGGTCGACTCC GACCAGTTCGCGCAGTCACTGGCCGTGCTGGGCAAGCAACTCGGCGGGGTGCCGCCGCTGGTACCTCAGGCCGTCGCCAA CCTGCAGACGTTGTCGACGATCACCGCGGACCGGCGCGGCCAGCTGGGTGCGCTGCTGAAAAGCACTCAGCGCGTGGTCA ATACGCTTCGCAATCAGCAGAGCAACATCGGGCATCTGATGGATCAGGGTCAGGATCTGCTCGGCCACCTGGTGGCGCGA CAGGCCACCTTCCACGCCATGTTCGCGGCGCTGACCGAACTCGTGGACCAACTCGACAAGATCGTCGTCAACAACCGGCC GATGCTCGACGAATTGTTCGCGAACCTGCACCAGCTGACCAACATGGTCGGCCAGCACGACGACCTGGTGCGCAACATCC TGCAGGTCGCCCCGGTGACGCTGCGGGGCCTGACCAACGCCACCGGCTACGGCCCGGTCGTCGAGTTCAACCTGCCCAAC GGGCTGGCCATCGACTCGTGGATGTGCGCAATCAGCGGCCGGGCCAAGGAATTCAACATGATCCAGTACTTCAAGGACTG CAAATGA
Upstream 100 bases:
>100_bases ATCACCACCTTCATCGTCAACGCGGCCACGCCCGGCAACGCGTATCCGATCACCACGAAAAACCTGGGGTGGCACACCCC GCGATGCAGGAACATGGCCA
Downstream 100 bases:
>100_bases CGTCCCGGCGACGCAAACTCATCGCCCTGGCTGCCGCCGCCGCGGCGCTGGCCGCCGTCGCCATCGGGGTGGTTGGCCAC TACGTCAAGGCCCGCCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family C; MCE-Family B; MCE-Family Protein; MCE Family Protein; Mce Family C; Mce-Related Protein; MCE-Family; Mammalian Cell Entry Related Domain Protein; Mce-Family C; MCE-Family F; Mce Family B; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob; Mce Family Protein Mce5C
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MADTRKLRWLRRRPLESYNRTWLGLAGLVVVAVLVAVSLGIKLLGVGYTHYTAEFLQAATLRPGNPITVAGIEVGHVTSM KLAGDHVEAGLSVRDNVPLGKDTRAVIKVMTILGSRYLELVPDGPGSLPANTIPLAHTEVPYDLQSLLEDATTTFEQVDS DQFAQSLAVLGKQLGGVPPLVPQAVANLQTLSTITADRRGQLGALLKSTQRVVNTLRNQQSNIGHLMDQGQDLLGHLVAR QATFHAMFAALTELVDQLDKIVVNNRPMLDELFANLHQLTNMVGQHDDLVRNILQVAPVTLRGLTNATGYGPVVEFNLPN GLAIDSWMCAISGRAKEFNMIQYFKDCK
Sequences:
>Translated_348_residues MADTRKLRWLRRRPLESYNRTWLGLAGLVVVAVLVAVSLGIKLLGVGYTHYTAEFLQAATLRPGNPITVAGIEVGHVTSM KLAGDHVEAGLSVRDNVPLGKDTRAVIKVMTILGSRYLELVPDGPGSLPANTIPLAHTEVPYDLQSLLEDATTTFEQVDS DQFAQSLAVLGKQLGGVPPLVPQAVANLQTLSTITADRRGQLGALLKSTQRVVNTLRNQQSNIGHLMDQGQDLLGHLVAR QATFHAMFAALTELVDQLDKIVVNNRPMLDELFANLHQLTNMVGQHDDLVRNILQVAPVTLRGLTNATGYGPVVEFNLPN GLAIDSWMCAISGRAKEFNMIQYFKDCK >Mature_347_residues ADTRKLRWLRRRPLESYNRTWLGLAGLVVVAVLVAVSLGIKLLGVGYTHYTAEFLQAATLRPGNPITVAGIEVGHVTSMK LAGDHVEAGLSVRDNVPLGKDTRAVIKVMTILGSRYLELVPDGPGSLPANTIPLAHTEVPYDLQSLLEDATTTFEQVDSD QFAQSLAVLGKQLGGVPPLVPQAVANLQTLSTITADRRGQLGALLKSTQRVVNTLRNQQSNIGHLMDQGQDLLGHLVARQ ATFHAMFAALTELVDQLDKIVVNNRPMLDELFANLHQLTNMVGQHDDLVRNILQVAPVTLRGLTNATGYGPVVEFNLPNG LAIDSWMCAISGRAKEFNMIQYFKDCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37882; Mature: 37751
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTRKLRWLRRRPLESYNRTWLGLAGLVVVAVLVAVSLGIKLLGVGYTHYTAEFLQAAT CCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCHHHEECCHHHHHHHHHHHHH LRPGNPITVAGIEVGHVTSMKLAGDHVEAGLSVRDNVPLGKDTRAVIKVMTILGSRYLEL CCCCCCEEEEEEEECCEEEEHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEE VPDGPGSLPANTIPLAHTEVPYDLQSLLEDATTTFEQVDSDQFAQSLAVLGKQLGGVPPL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH VPQAVANLQTLSTITADRRGQLGALLKSTQRVVNTLRNQQSNIGHLMDQGQDLLGHLVAR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QATFHAMFAALTELVDQLDKIVVNNRPMLDELFANLHQLTNMVGQHDDLVRNILQVAPVT HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHH LRGLTNATGYGPVVEFNLPNGLAIDSWMCAISGRAKEFNMIQYFKDCK HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure ADTRKLRWLRRRPLESYNRTWLGLAGLVVVAVLVAVSLGIKLLGVGYTHYTAEFLQAAT CCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCHHHEECCHHHHHHHHHHHHH LRPGNPITVAGIEVGHVTSMKLAGDHVEAGLSVRDNVPLGKDTRAVIKVMTILGSRYLEL CCCCCCEEEEEEEECCEEEEHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEE VPDGPGSLPANTIPLAHTEVPYDLQSLLEDATTTFEQVDSDQFAQSLAVLGKQLGGVPPL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH VPQAVANLQTLSTITADRRGQLGALLKSTQRVVNTLRNQQSNIGHLMDQGQDLLGHLVAR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QATFHAMFAALTELVDQLDKIVVNNRPMLDELFANLHQLTNMVGQHDDLVRNILQVAPVT HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHH LRGLTNATGYGPVVEFNLPNGLAIDSWMCAISGRAKEFNMIQYFKDCK HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA