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The map label for this gene is 41406102

Identifier: 41406102

GI number: 41406102

Start: 4499

End: 4999

Strand: Direct

Name: 41406102

Synonym: MAP0004

Alternate gene names: NA

Gene position: 4499-4999 (Clockwise)

Preceding gene: 41406101

Following gene: 41406103

Centisome position: 0.09

GC content: 75.25

Gene sequence:

>501_bases
ATGGACCTGGTGCGGCGGACCCTCGAGGAGGCCCGGGCCGCGGCCCGGGCACAGGGAAAAGACGCCGGCCGCGGGCGCGC
CGCAGCACCCACGCCGCGCCGGGTGGCGGGTCAGCGGCGCAGCTGGTCGGGACCGGGACCCGACGCTCGCGACCCGCAAC
CGCTGGGCCGGCTGGCGCGGGACCTGGCCAGGAAGCGGGGATGGTCGGCCCAGGTCGCCGAGGGCACCGTGTTGGGGAAC
TGGACGGCGGTGGTCGGTCACCAGATCGCCGACCACGCGGTCCCCACCGGTCTGCGCGACGGTGTGCTGAGCGTGTCCGC
CGAGTCGACAGCCTGGGCCACCCAGTTGCGGATGATGCAGGCGCAACTGTTGGCCAAGATCGCCGCCGCGGTCGGCAACG
GGGTGGTGACCTCGCTGAAGATCACCGGCCCGGCCGCGCCGTCCTGGCGCAAAGGCCCGCGGCACATCGCCGGGCGCGGG
CCGCGCGACACCTATGGGTAG

Upstream 100 bases:

>100_bases
GGCTCTTCGTCGAGTTGCGCGACACCGACGCGGGCCGGGTATCGGAGCTGCGCCCATGAGCGACGACCAGTCCCCCTCCC
CCTCGGGAGAACCGACCGCG

Downstream 100 bases:

>100_bases
GCCCGGTCGTTAGCCCGGCCCCATCCCCACCGCGGCCTTCCTCAACAGGGCGCTGAAATCCGCCAGGACGACGCGTATCC
CCTTGACGCATGTCGGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MDLVRRTLEEARAAARAQGKDAGRGRAAAPTPRRVAGQRRSWSGPGPDARDPQPLGRLARDLARKRGWSAQVAEGTVLGN
WTAVVGHQIADHAVPTGLRDGVLSVSAESTAWATQLRMMQAQLLAKIAAAVGNGVVTSLKITGPAAPSWRKGPRHIAGRG
PRDTYG

Sequences:

>Translated_166_residues
MDLVRRTLEEARAAARAQGKDAGRGRAAAPTPRRVAGQRRSWSGPGPDARDPQPLGRLARDLARKRGWSAQVAEGTVLGN
WTAVVGHQIADHAVPTGLRDGVLSVSAESTAWATQLRMMQAQLLAKIAAAVGNGVVTSLKITGPAAPSWRKGPRHIAGRG
PRDTYG
>Mature_166_residues
MDLVRRTLEEARAAARAQGKDAGRGRAAAPTPRRVAGQRRSWSGPGPDARDPQPLGRLARDLARKRGWSAQVAEGTVLGN
WTAVVGHQIADHAVPTGLRDGVLSVSAESTAWATQLRMMQAQLLAKIAAAVGNGVVTSLKITGPAAPSWRKGPRHIAGRG
PRDTYG

Specific function: Unknown

COG id: COG5512

COG function: function code R; Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0232 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y004_MYCPA (Q9L7L4)

Other databases:

- EMBL:   AF222789
- EMBL:   AE016958
- RefSeq:   NP_958938.1
- EnsemblBacteria:   EBMYCT00000039243
- GeneID:   2720437
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP0004
- NMPDR:   fig|262316.1.peg.4
- GeneTree:   EBGT00050000015924
- HOGENOM:   HBG725227
- OMA:   PDDRDPQ
- ProtClustDB:   PRK03195
- HAMAP:   MF_00630
- InterPro:   IPR007922
- InterPro:   IPR023007

Pfam domain/function: PF05258 DUF721

EC number: NA

Molecular weight: Translated: 17507; Mature: 17507

Theoretical pI: Translated: 12.22; Mature: 12.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVRRTLEEARAAARAQGKDAGRGRAAAPTPRRVAGQRRSWSGPGPDARDPQPLGRLAR
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHH
DLARKRGWSAQVAEGTVLGNWTAVVGHQIADHAVPTGLRDGVLSVSAESTAWATQLRMMQ
HHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHH
AQLLAKIAAAVGNGVVTSLKITGPAAPSWRKGPRHIAGRGPRDTYG
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLVRRTLEEARAAARAQGKDAGRGRAAAPTPRRVAGQRRSWSGPGPDARDPQPLGRLAR
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHH
DLARKRGWSAQVAEGTVLGNWTAVVGHQIADHAVPTGLRDGVLSVSAESTAWATQLRMMQ
HHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHH
AQLLAKIAAAVGNGVVTSLKITGPAAPSWRKGPRHIAGRGPRDTYG
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA