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The map label for this gene is traN

Identifier: 52842297

GI number: 52842297

Start: 2332894

End: 2334705

Strand: Reverse

Name: traN

Synonym: lpg2083

Alternate gene names: 52842297

Gene position: 2334705-2332894 (Counterclockwise)

Preceding gene: 52842298

Following gene: 52842296

Centisome position: 68.71

GC content: 42.38

Gene sequence:

>1812_bases
ATGAAAGGCTTCGTTTTAGTTTTTTTAATCCTTTGTTCACAGGTTTTTGCACTTGATTTGAATCAGGCGTATCAAGAAGG
CGTTCAGACCGGAACAAGCCATACCAATCAATCCATTGATTTATTAAAAGCACTGGATCTGAGCCAGTTTCCTGGCTATC
AAGCCAATCTGCCGCAAGAACATTATTATAGTGGCGTCACGCAGGCAAGCACAGGTCTTGAAGCCGATTCGCAAACTGCC
GTGGCTCAGAATGATGCAGGAAAGGCAGTAGGCGAAAGTTTTAATCATCGCCCCTTGTATCAAGTAAATCCTGCCTCGGA
ATCAATGCAAAAGTTAAATCAAATCGCGGAAAATGGAGATGCGATTATGCATGGTCAAAATACCGATAAAACCACCTGCT
CTTTAAAACCCAAAGAATGCCATTACTCATGGCAGGAAAAAACATGCCTGTCTAGCAAGGTATTAGGTGTATTGCATTGT
GCAAGACACTTAAGGTTAGATGTTTCCCCCTACAAAACAGAAAGTTACAGTCTATACCTGCGAAAAGGAGGTATGAGGAA
TACCCCTTTTAAAGTCTCAGTTAATCTGGCACAAGCGGATACCTGCCAACAAGGCAAAACTCCTTGCTATACGATTTATA
AGGATTTAGCACCAGCACCAGCGATTCTATTGCCTGCCAATTGCGCCATGGTGAAGGTCAGTTTCCTTGATGAAAAGAAA
TTAGTGGTTGTTGAGCAAACAGCTACATGCGCCAATCCCACCCTATCATTGTCTGTTGGCAATTGTCGATTCGGTCGCTG
CACAGTGCCCTATGTTCACTCCGTTTCGATGACGGTAGAAATTTATGAAAGCAAAGAGTATTGGGACGACCAATGCCAAC
ATTTGCAAAACAAAGAAAAAGAGGGGTTGTGTCATATTACTGAGCCTCTAACATGCACTGAGCCCAATCAAACACGGATT
ATTGGCGATGTTCCATTGACCCGCCCTTGCTGGAAAGAGAGAGCATCCTACACCTGTGGTGGTAGTCAGGAGCAAAATAC
GTGCGATAACCTAGTTAATCAAGGATGTGAGCAGACTGCTTCAACTTGTGTGAAAGAAGAAGCAGGACTTTGCACAACCC
ATCAGCAAACGTATCAATGCCCGATAAACCAATGTACTGACAACCAACTGTTGTGTGGCGAGGATGCTTTTTGTTTGGAT
GGTAATTGCGCGAAACATGAACTAACCCCAGCCAATGAAGACGATTTTAAAAAAGCAATGTCCACCTTATCCGCCGCCTC
GGATGCCTCAAAAGACTTTGATGGCAATGCCAATTTTATTTTCAAAGGTCAATTGCTTGAATGTTCAACAACAATGCTCC
ATTTTAAAAATTGTTGCAGTGATAAGGGGTGGGGTCTGGATCTTGAGCTGGCACAGTGTAGTGATGCTGAGAAAAAACTG
GGAAAAGCTCGAGAAAACAAACTGGTAGTACCTACGGGTGAATATTGTTTTAAACGCAAAAAACTCCCTATTGGCTCGGT
CTGTGTCGATCATCACCAGACTTACTGTGTCTTCCAATCTAAATTAGCCCGTATGGTTCAAGTACAAGGAAGACGTGATC
AGTTACATATTGGTTTTGGCCAAAATAAATATTCAAATTGCTCGGGTATTACGCCTGAGCAATTGCAATTAATTCACTTC
GAAGCCATTGATTTTTCAGAATTTTATGAGGAGGTAAAAAATAAACAAAAACAACCGGATTACCAACAGACTGCCAATGG
AATAAGCCAGCGCCTTAATCAATTTTACAATCAAGGAGACATCAATGGCTAG

Upstream 100 bases:

>100_bases
TATCGCTGGACTATGCTTTGGAAAAAATGAGGGGAGATGAGCAGTCAGAAGACCCCGTGTTGGATCAAATGATTCTTCGG
TTAAGAGGGGAATTAATCTA

Downstream 100 bases:

>100_bases
ATGGTTTTTTGTTTTGTTGGTTAGCGTGAGTCCTTTTTTGTACGCCGAGCAGCCTTATCTTAATGAGCATGAGGAAGGTT
GGTATTGGCATAAGGATCCC

Product: conjugal transfer mating pair stabilization protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 603

Protein sequence:

>603_residues
MKGFVLVFLILCSQVFALDLNQAYQEGVQTGTSHTNQSIDLLKALDLSQFPGYQANLPQEHYYSGVTQASTGLEADSQTA
VAQNDAGKAVGESFNHRPLYQVNPASESMQKLNQIAENGDAIMHGQNTDKTTCSLKPKECHYSWQEKTCLSSKVLGVLHC
ARHLRLDVSPYKTESYSLYLRKGGMRNTPFKVSVNLAQADTCQQGKTPCYTIYKDLAPAPAILLPANCAMVKVSFLDEKK
LVVVEQTATCANPTLSLSVGNCRFGRCTVPYVHSVSMTVEIYESKEYWDDQCQHLQNKEKEGLCHITEPLTCTEPNQTRI
IGDVPLTRPCWKERASYTCGGSQEQNTCDNLVNQGCEQTASTCVKEEAGLCTTHQQTYQCPINQCTDNQLLCGEDAFCLD
GNCAKHELTPANEDDFKKAMSTLSAASDASKDFDGNANFIFKGQLLECSTTMLHFKNCCSDKGWGLDLELAQCSDAEKKL
GKARENKLVVPTGEYCFKRKKLPIGSVCVDHHQTYCVFQSKLARMVQVQGRRDQLHIGFGQNKYSNCSGITPEQLQLIHF
EAIDFSEFYEEVKNKQKQPDYQQTANGISQRLNQFYNQGDING

Sequences:

>Translated_603_residues
MKGFVLVFLILCSQVFALDLNQAYQEGVQTGTSHTNQSIDLLKALDLSQFPGYQANLPQEHYYSGVTQASTGLEADSQTA
VAQNDAGKAVGESFNHRPLYQVNPASESMQKLNQIAENGDAIMHGQNTDKTTCSLKPKECHYSWQEKTCLSSKVLGVLHC
ARHLRLDVSPYKTESYSLYLRKGGMRNTPFKVSVNLAQADTCQQGKTPCYTIYKDLAPAPAILLPANCAMVKVSFLDEKK
LVVVEQTATCANPTLSLSVGNCRFGRCTVPYVHSVSMTVEIYESKEYWDDQCQHLQNKEKEGLCHITEPLTCTEPNQTRI
IGDVPLTRPCWKERASYTCGGSQEQNTCDNLVNQGCEQTASTCVKEEAGLCTTHQQTYQCPINQCTDNQLLCGEDAFCLD
GNCAKHELTPANEDDFKKAMSTLSAASDASKDFDGNANFIFKGQLLECSTTMLHFKNCCSDKGWGLDLELAQCSDAEKKL
GKARENKLVVPTGEYCFKRKKLPIGSVCVDHHQTYCVFQSKLARMVQVQGRRDQLHIGFGQNKYSNCSGITPEQLQLIHF
EAIDFSEFYEEVKNKQKQPDYQQTANGISQRLNQFYNQGDING
>Mature_603_residues
MKGFVLVFLILCSQVFALDLNQAYQEGVQTGTSHTNQSIDLLKALDLSQFPGYQANLPQEHYYSGVTQASTGLEADSQTA
VAQNDAGKAVGESFNHRPLYQVNPASESMQKLNQIAENGDAIMHGQNTDKTTCSLKPKECHYSWQEKTCLSSKVLGVLHC
ARHLRLDVSPYKTESYSLYLRKGGMRNTPFKVSVNLAQADTCQQGKTPCYTIYKDLAPAPAILLPANCAMVKVSFLDEKK
LVVVEQTATCANPTLSLSVGNCRFGRCTVPYVHSVSMTVEIYESKEYWDDQCQHLQNKEKEGLCHITEPLTCTEPNQTRI
IGDVPLTRPCWKERASYTCGGSQEQNTCDNLVNQGCEQTASTCVKEEAGLCTTHQQTYQCPINQCTDNQLLCGEDAFCLD
GNCAKHELTPANEDDFKKAMSTLSAASDASKDFDGNANFIFKGQLLECSTTMLHFKNCCSDKGWGLDLELAQCSDAEKKL
GKARENKLVVPTGEYCFKRKKLPIGSVCVDHHQTYCVFQSKLARMVQVQGRRDQLHIGFGQNKYSNCSGITPEQLQLIHF
EAIDFSEFYEEVKNKQKQPDYQQTANGISQRLNQFYNQGDING

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 67120; Mature: 67120

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGFVLVFLILCSQVFALDLNQAYQEGVQTGTSHTNQSIDLLKALDLSQFPGYQANLPQE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH
HYYSGVTQASTGLEADSQTAVAQNDAGKAVGESFNHRPLYQVNPASESMQKLNQIAENGD
HHHCCCHHHCCCCCCCCCCHHHCCCCCHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCC
AIMHGQNTDKTTCSLKPKECHYSWQEKTCLSSKVLGVLHCARHLRLDVSPYKTESYSLYL
EEEECCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEE
RKGGMRNTPFKVSVNLAQADTCQQGKTPCYTIYKDLAPAPAILLPANCAMVKVSFLDEKK
ECCCCCCCCEEEEEEEECCCHHHCCCCCHHHHHHHCCCCCEEEEECCCEEEEEEEECCCE
LVVVEQTATCANPTLSLSVGNCRFGRCTVPYVHSVSMTVEIYESKEYWDDQCQHLQNKEK
EEEEECCCCCCCCEEEEEECCEECCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCC
EGLCHITEPLTCTEPNQTRIIGDVPLTRPCWKERASYTCGGSQEQNTCDNLVNQGCEQTA
CCCEEECCCEEECCCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
STCVKEEAGLCTTHQQTYQCPINQCTDNQLLCGEDAFCLDGNCAKHELTPANEDDFKKAM
HHHHHHHCCCEECCCHHEECCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCHHHHHHHH
STLSAASDASKDFDGNANFIFKGQLLECSTTMLHFKNCCSDKGWGLDLELAQCSDAEKKL
HHHHHHHCCCCCCCCCCCEEEECCEEHHHHHHHHHHHHCCCCCCCCEEEHHHCCCHHHHH
GKARENKLVVPTGEYCFKRKKLPIGSVCVDHHQTYCVFQSKLARMVQVQGRRDQLHIGFG
HHHHCCEEEEECCHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
QNKYSNCSGITPEQLQLIHFEAIDFSEFYEEVKNKQKQPDYQQTANGISQRLNQFYNQGD
CCCCCCCCCCCHHHEEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
ING
CCC
>Mature Secondary Structure
MKGFVLVFLILCSQVFALDLNQAYQEGVQTGTSHTNQSIDLLKALDLSQFPGYQANLPQE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH
HYYSGVTQASTGLEADSQTAVAQNDAGKAVGESFNHRPLYQVNPASESMQKLNQIAENGD
HHHCCCHHHCCCCCCCCCCHHHCCCCCHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCC
AIMHGQNTDKTTCSLKPKECHYSWQEKTCLSSKVLGVLHCARHLRLDVSPYKTESYSLYL
EEEECCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEE
RKGGMRNTPFKVSVNLAQADTCQQGKTPCYTIYKDLAPAPAILLPANCAMVKVSFLDEKK
ECCCCCCCCEEEEEEEECCCHHHCCCCCHHHHHHHCCCCCEEEEECCCEEEEEEEECCCE
LVVVEQTATCANPTLSLSVGNCRFGRCTVPYVHSVSMTVEIYESKEYWDDQCQHLQNKEK
EEEEECCCCCCCCEEEEEECCEECCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCC
EGLCHITEPLTCTEPNQTRIIGDVPLTRPCWKERASYTCGGSQEQNTCDNLVNQGCEQTA
CCCEEECCCEEECCCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
STCVKEEAGLCTTHQQTYQCPINQCTDNQLLCGEDAFCLDGNCAKHELTPANEDDFKKAM
HHHHHHHCCCEECCCHHEECCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCHHHHHHHH
STLSAASDASKDFDGNANFIFKGQLLECSTTMLHFKNCCSDKGWGLDLELAQCSDAEKKL
HHHHHHHCCCCCCCCCCCEEEECCEEHHHHHHHHHHHHCCCCCCCCEEEHHHCCCHHHHH
GKARENKLVVPTGEYCFKRKKLPIGSVCVDHHQTYCVFQSKLARMVQVQGRRDQLHIGFG
HHHHCCEEEEECCHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
QNKYSNCSGITPEQLQLIHFEAIDFSEFYEEVKNKQKQPDYQQTANGISQRLNQFYNQGD
CCCCCCCCCCCHHHEEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
ING
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]