Click here to switch to the map view.

The map label for this gene is astB

Identifier: 52841936

GI number: 52841936

Start: 1904337

End: 1905683

Strand: Direct

Name: astB

Synonym: lpg1708

Alternate gene names: 52841936

Gene position: 1904337-1905683 (Clockwise)

Preceding gene: 52841935

Following gene: 52841937

Centisome position: 56.05

GC content: 38.31

Gene sequence:

>1347_bases
ATGAATGTTTATGAATTGAATATGGATGGGCTTGTTGGTCAAACTCATCATTACGCAGGGCTCTCCTCGGGTAATATAGC
TTCTACAAATAATGCTTTATCTATTTCCAACCCTCAAGCTGCAGCAAGGCAAGGTTTGGAAAAAATGCGGCAACTTTATA
ACATGGGGTTAAAGCAAGGCCTATTGCCCCCACATCAACGACCTAATTTGAATTTACTGTATCAACTGGGATTTAAAGGC
ACTCCCAGTGAGCAGATAAACAAAGCCTATAAAACAGCGCCCGAATTGCTTAGTGCCTGCTACTCTGCCTCAAGTATGTG
GACAGCTAATGCAGCAACTGTTTCTGCAAGCGTGGATACTGAAGACAACAAAGTACATTTCACTGCTGCCAATTTAATCA
GCAATTTGCATCGTCACCAGGAAGCTGATTTTTCAAAAAAATTATTGGAATTTATCTTTTCCAATTCTGATTATTTTAAT
CATCACCCTCTGTTACCCAAATCAATGGGCACAAGCGATGAGGGAGCAGCTAATCATAATCGCTTATGTCAAAGTCATGC
GCACTCAGGGATTAATCTCTTTGTATACGGTAAAAAAGTGCTGGGAAATCATCAATTCGAACAGAGCCCAATAAAATACC
CTGCTCGGCAAACTAAAGAAGCGTCAGAAGCCATCGCTCGCAACCATTTATTAAATCCTGAACGAGTAATCTTTGCCTGT
CAAAATCCATTAGCAATAGATCAAGGTGTATTTCATAATGATGTCATCTCAGTTGCTAATGAACATGTATTTCTGGTTCA
TGAAGAAGCTTTTTATAATCAGGCTTATGTTTTGGATCAATTAAGAGAAAAAGCCGATTTTCCTTTAGTAATAATTCAGA
TCTCAAAAGAACAAATCAGCGTTAGTGAAGCAGTTGATACCTATCTTTTCAATTCTCAATTGATTACCCTGCCTGATCAG
AAGAATATGATTTTAATAGCCCCTGCTGAATGTCAGGCAAACCTTAAAGTAAAAACTTGTATTGATGGATTGGTCGCCGA
TCCTCAAAACCCTATTAACTCAGTGTATTACCTGGATCTGAAACAAAGCATGCGTAATGGCGGAGGACCAGCCTGTTTAC
GCTTGCGAGTTCCTTTGAATGACTACGAGCTTAAAGCAATGCACCAAGGTATTCTAATTGATAATGATTTGTTAGATATT
TTAGATAAATGGGTTTTAAAATATTACCGAACTGAACTGAAAATCCCCGATTTAGCTGATCCGCAACTATTATATGAATG
TCTGGATGCATTGGATGAATTAACTCAGATCTTGAAATTAGGCTCAATATATCCCTTTCAATCTTGA

Upstream 100 bases:

>100_bases
TTGCTGCTGATTATTGTGCTTATCCTGTAGCAAGCATGGAGCAACCTCTGTTAACAACTCCAGTGCAACGATTGCCAGGT
CTGGTATTGGAGTAATTATT

Downstream 100 bases:

>100_bases
GTATCCGAGTCATGTGGAAAACAAAATTCGGCAAATGTATCTATATTTCACCGTCAGGATATAAAGTCTATCAAAATTTG
TTGTACCGTTGGCTTACTTT

Product: succinylarginine dihydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MNVYELNMDGLVGQTHHYAGLSSGNIASTNNALSISNPQAAARQGLEKMRQLYNMGLKQGLLPPHQRPNLNLLYQLGFKG
TPSEQINKAYKTAPELLSACYSASSMWTANAATVSASVDTEDNKVHFTAANLISNLHRHQEADFSKKLLEFIFSNSDYFN
HHPLLPKSMGTSDEGAANHNRLCQSHAHSGINLFVYGKKVLGNHQFEQSPIKYPARQTKEASEAIARNHLLNPERVIFAC
QNPLAIDQGVFHNDVISVANEHVFLVHEEAFYNQAYVLDQLREKADFPLVIIQISKEQISVSEAVDTYLFNSQLITLPDQ
KNMILIAPAECQANLKVKTCIDGLVADPQNPINSVYYLDLKQSMRNGGGPACLRLRVPLNDYELKAMHQGILIDNDLLDI
LDKWVLKYYRTELKIPDLADPQLLYECLDALDELTQILKLGSIYPFQS

Sequences:

>Translated_448_residues
MNVYELNMDGLVGQTHHYAGLSSGNIASTNNALSISNPQAAARQGLEKMRQLYNMGLKQGLLPPHQRPNLNLLYQLGFKG
TPSEQINKAYKTAPELLSACYSASSMWTANAATVSASVDTEDNKVHFTAANLISNLHRHQEADFSKKLLEFIFSNSDYFN
HHPLLPKSMGTSDEGAANHNRLCQSHAHSGINLFVYGKKVLGNHQFEQSPIKYPARQTKEASEAIARNHLLNPERVIFAC
QNPLAIDQGVFHNDVISVANEHVFLVHEEAFYNQAYVLDQLREKADFPLVIIQISKEQISVSEAVDTYLFNSQLITLPDQ
KNMILIAPAECQANLKVKTCIDGLVADPQNPINSVYYLDLKQSMRNGGGPACLRLRVPLNDYELKAMHQGILIDNDLLDI
LDKWVLKYYRTELKIPDLADPQLLYECLDALDELTQILKLGSIYPFQS
>Mature_448_residues
MNVYELNMDGLVGQTHHYAGLSSGNIASTNNALSISNPQAAARQGLEKMRQLYNMGLKQGLLPPHQRPNLNLLYQLGFKG
TPSEQINKAYKTAPELLSACYSASSMWTANAATVSASVDTEDNKVHFTAANLISNLHRHQEADFSKKLLEFIFSNSDYFN
HHPLLPKSMGTSDEGAANHNRLCQSHAHSGINLFVYGKKVLGNHQFEQSPIKYPARQTKEASEAIARNHLLNPERVIFAC
QNPLAIDQGVFHNDVISVANEHVFLVHEEAFYNQAYVLDQLREKADFPLVIIQISKEQISVSEAVDTYLFNSQLITLPDQ
KNMILIAPAECQANLKVKTCIDGLVADPQNPINSVYYLDLKQSMRNGGGPACLRLRVPLNDYELKAMHQGILIDNDLLDI
LDKWVLKYYRTELKIPDLADPQLLYECLDALDELTQILKLGSIYPFQS

Specific function: Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) [H]

COG id: COG3724

COG function: function code E; Succinylarginine dihydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the succinylarginine dihydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1788041, Length=447, Percent_Identity=49.4407158836689, Blast_Score=436, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007079 [H]

Pfam domain/function: PF04996 AstB [H]

EC number: =3.5.3.23 [H]

Molecular weight: Translated: 50135; Mature: 50135

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVYELNMDGLVGQTHHYAGLSSGNIASTNNALSISNPQAAARQGLEKMRQLYNMGLKQG
CCEEEECCCCCCCCCHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHC
LLPPHQRPNLNLLYQLGFKGTPSEQINKAYKTAPELLSACYSASSMWTANAATVSASVDT
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEECCC
EDNKVHFTAANLISNLHRHQEADFSKKLLEFIFSNSDYFNHHPLLPKSMGTSDEGAANHN
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
RLCQSHAHSGINLFVYGKKVLGNHQFEQSPIKYPARQTKEASEAIARNHLLNPERVIFAC
HHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
QNPLAIDQGVFHNDVISVANEHVFLVHEEAFYNQAYVLDQLREKADFPLVIIQISKEQIS
CCCCCCCCCCHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
VSEAVDTYLFNSQLITLPDQKNMILIAPAECQANLKVKTCIDGLVADPQNPINSVYYLDL
HHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEE
KQSMRNGGGPACLRLRVPLNDYELKAMHQGILIDNDLLDILDKWVLKYYRTELKIPDLAD
HHHHCCCCCCEEEEEEECCCCHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCC
PQLLYECLDALDELTQILKLGSIYPFQS
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNVYELNMDGLVGQTHHYAGLSSGNIASTNNALSISNPQAAARQGLEKMRQLYNMGLKQG
CCEEEECCCCCCCCCHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHC
LLPPHQRPNLNLLYQLGFKGTPSEQINKAYKTAPELLSACYSASSMWTANAATVSASVDT
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEECCC
EDNKVHFTAANLISNLHRHQEADFSKKLLEFIFSNSDYFNHHPLLPKSMGTSDEGAANHN
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
RLCQSHAHSGINLFVYGKKVLGNHQFEQSPIKYPARQTKEASEAIARNHLLNPERVIFAC
HHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
QNPLAIDQGVFHNDVISVANEHVFLVHEEAFYNQAYVLDQLREKADFPLVIIQISKEQIS
CCCCCCCCCCHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
VSEAVDTYLFNSQLITLPDQKNMILIAPAECQANLKVKTCIDGLVADPQNPINSVYYLDL
HHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEE
KQSMRNGGGPACLRLRVPLNDYELKAMHQGILIDNDLLDILDKWVLKYYRTELKIPDLAD
HHHHCCCCCCEEEEEEECCCCHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCC
PQLLYECLDALDELTQILKLGSIYPFQS
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA