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The map label for this gene is 52840318

Identifier: 52840318

GI number: 52840318

Start: 69976

End: 71334

Strand: Reverse

Name: 52840318

Synonym: lpg0062

Alternate gene names: NA

Gene position: 71334-69976 (Counterclockwise)

Preceding gene: 52840325

Following gene: 52840313

Centisome position: 2.1

GC content: 32.67

Gene sequence:

>1359_bases
TTGATTAGAATTGGGACATACTATTTAATTTCTTGTACTAAAATGTTAGCAATAAAAAAAGTTTTTTGGACTGATATCAG
GAACATCATGAAAACCATTAATCCGGTTTTTTTTGAACTAGTTGATAAACTCTCTCCAGATAATAAATTTGCAATGTATC
TCGTAGATTATGGTTATGGAGATTTGGTTGGTGATGATGATGGGATATTTTTGCCAACTAAAACAGGTCAATATGTTCGT
CTTGATTCAGAATATACTCCCCCATCGATTTTAAATGATTTGGCTTATGGTTTGACTAATAGTCCATTAGGCGTTTTTTT
TAATAAATCATTTGAATGGTTTTTAAATACCTCCGATGAGCAAATTAACCGGACATTTCCTATATATATTGATCCTCCAG
GTACATTTTTTAGTATAGGACATATTATTAATTATGGTTACACAGCAACCCATTTACCAAATGGGGTTCTTTTTGTTACA
GCCGGTTCAAAATCCAATTTTATGATTCCCAAAATTGGGTGTGGAATTATGCATTCGCGAATACAAAAGAATCATAATAT
TACAAAGTCGGCTCCTCGCTCTTATCACGAGCATGCTGATATATTTCAAGATATAGTTAAAGGTAACAGGGATAATAATG
GTTGGAGTGCGTCTGTATTATATTTTTCTGAAAATTGGATTGAAAAAATCAGTAAGGACTCCGCATGGCAGGAAGTTAGA
GATTATTTTTACAGGATTTCAAACCATCGATCTGAATATGCAGTAAATAGCGATTATTATAATCACGTTTATAGAGTTAC
CAATAAAAGGAATAATTTAAAATCCAATTTATTAATCTATGAAACAGCACGACATCTTTTTGAGATACTGCTAGGTGCAA
AACTTGGTTTTGCGCCTGCAATGGATGATGAATTACTCCCATTATCTATTATTCAAGAAGTTTATTCAGAATGTTATAAG
TTAGAATATTTGCCCATTATAGCAATACCTGCATATTATAATTACCGGGATCCTAAACCTGTTTATTATTCTCTTCAGTA
TCCCTCTCTATGTAGTTATTCACCCAAAGCAAGGAATGCATCGACCACCCTTTCAGATCTTATCGCTTTAATTGATGTTG
TTCATAAATATCAAAAGGATTTCACTTTACCGATTCGGGAATGTAAAAATACTATCCTTGAAGAGGTTTCAAAAATAACC
AGTTTTAATTTCTATCATCCAGCTACTGAAGAAAATAGCATTATCAAATCACCGGAAATTATCCCTTATCAGGATGAGCG
CTTCAGAGGTGAAAAGAGGTTCCCGATTAATGCATCCTTTTTTAAAGGATGCGTTTCGATTTTTTCAAATAGTATTTAA

Upstream 100 bases:

>100_bases
TGTTATAAAAACTTCAATTTGAAGATAAGATTAAATCATTTAACTTCATGAACTTATACTGACAATTTGTCTGAACTAAT
AGTAGAGTAAAGTTATTTTT

Downstream 100 bases:

>100_bases
TTATTTTTTGACGCTAAATAAAATAAATAGGAAAAAACCAAGTATTCCGGCTAATATCCAACAGGCATTATAACTATAAT
ACTCCATGAGGAAACCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MIRIGTYYLISCTKMLAIKKVFWTDIRNIMKTINPVFFELVDKLSPDNKFAMYLVDYGYGDLVGDDDGIFLPTKTGQYVR
LDSEYTPPSILNDLAYGLTNSPLGVFFNKSFEWFLNTSDEQINRTFPIYIDPPGTFFSIGHIINYGYTATHLPNGVLFVT
AGSKSNFMIPKIGCGIMHSRIQKNHNITKSAPRSYHEHADIFQDIVKGNRDNNGWSASVLYFSENWIEKISKDSAWQEVR
DYFYRISNHRSEYAVNSDYYNHVYRVTNKRNNLKSNLLIYETARHLFEILLGAKLGFAPAMDDELLPLSIIQEVYSECYK
LEYLPIIAIPAYYNYRDPKPVYYSLQYPSLCSYSPKARNASTTLSDLIALIDVVHKYQKDFTLPIRECKNTILEEVSKIT
SFNFYHPATEENSIIKSPEIIPYQDERFRGEKRFPINASFFKGCVSIFSNSI

Sequences:

>Translated_452_residues
MIRIGTYYLISCTKMLAIKKVFWTDIRNIMKTINPVFFELVDKLSPDNKFAMYLVDYGYGDLVGDDDGIFLPTKTGQYVR
LDSEYTPPSILNDLAYGLTNSPLGVFFNKSFEWFLNTSDEQINRTFPIYIDPPGTFFSIGHIINYGYTATHLPNGVLFVT
AGSKSNFMIPKIGCGIMHSRIQKNHNITKSAPRSYHEHADIFQDIVKGNRDNNGWSASVLYFSENWIEKISKDSAWQEVR
DYFYRISNHRSEYAVNSDYYNHVYRVTNKRNNLKSNLLIYETARHLFEILLGAKLGFAPAMDDELLPLSIIQEVYSECYK
LEYLPIIAIPAYYNYRDPKPVYYSLQYPSLCSYSPKARNASTTLSDLIALIDVVHKYQKDFTLPIRECKNTILEEVSKIT
SFNFYHPATEENSIIKSPEIIPYQDERFRGEKRFPINASFFKGCVSIFSNSI
>Mature_452_residues
MIRIGTYYLISCTKMLAIKKVFWTDIRNIMKTINPVFFELVDKLSPDNKFAMYLVDYGYGDLVGDDDGIFLPTKTGQYVR
LDSEYTPPSILNDLAYGLTNSPLGVFFNKSFEWFLNTSDEQINRTFPIYIDPPGTFFSIGHIINYGYTATHLPNGVLFVT
AGSKSNFMIPKIGCGIMHSRIQKNHNITKSAPRSYHEHADIFQDIVKGNRDNNGWSASVLYFSENWIEKISKDSAWQEVR
DYFYRISNHRSEYAVNSDYYNHVYRVTNKRNNLKSNLLIYETARHLFEILLGAKLGFAPAMDDELLPLSIIQEVYSECYK
LEYLPIIAIPAYYNYRDPKPVYYSLQYPSLCSYSPKARNASTTLSDLIALIDVVHKYQKDFTLPIRECKNTILEEVSKIT
SFNFYHPATEENSIIKSPEIIPYQDERFRGEKRFPINASFFKGCVSIFSNSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52222; Mature: 52222

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIGTYYLISCTKMLAIKKVFWTDIRNIMKTINPVFFELVDKLSPDNKFAMYLVDYGYG
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
DLVGDDDGIFLPTKTGQYVRLDSEYTPPSILNDLAYGLTNSPLGVFFNKSFEWFLNTSDE
CCCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEECCCHH
QINRTFPIYIDPPGTFFSIGHIINYGYTATHLPNGVLFVTAGSKSNFMIPKIGCGIMHSR
HHCCEEEEEECCCCCCEEHHHHHHCCEEHEECCCCEEEEEECCCCCEECCCCCHHHHHHH
IQKNHNITKSAPRSYHEHADIFQDIVKGNRDNNGWSASVLYFSENWIEKISKDSAWQEVR
HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHCCCHHHHHHH
DYFYRISNHRSEYAVNSDYYNHVYRVTNKRNNLKSNLLIYETARHLFEILLGAKLGFAPA
HHHHHHHCCCCCEEECCCHHHHHEEECCCCCCCHHCEEEHHHHHHHHHHHHHCCCCCCCC
MDDELLPLSIIQEVYSECYKLEYLPIIAIPAYYNYRDPKPVYYSLQYPSLCSYSPKARNA
CCCCCCCHHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCC
STTLSDLIALIDVVHKYQKDFTLPIRECKNTILEEVSKITSFNFYHPATEENSIIKSPEI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCC
IPYQDERFRGEKRFPINASFFKGCVSIFSNSI
CCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIRIGTYYLISCTKMLAIKKVFWTDIRNIMKTINPVFFELVDKLSPDNKFAMYLVDYGYG
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
DLVGDDDGIFLPTKTGQYVRLDSEYTPPSILNDLAYGLTNSPLGVFFNKSFEWFLNTSDE
CCCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEECCCHH
QINRTFPIYIDPPGTFFSIGHIINYGYTATHLPNGVLFVTAGSKSNFMIPKIGCGIMHSR
HHCCEEEEEECCCCCCEEHHHHHHCCEEHEECCCCEEEEEECCCCCEECCCCCHHHHHHH
IQKNHNITKSAPRSYHEHADIFQDIVKGNRDNNGWSASVLYFSENWIEKISKDSAWQEVR
HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHCCCHHHHHHH
DYFYRISNHRSEYAVNSDYYNHVYRVTNKRNNLKSNLLIYETARHLFEILLGAKLGFAPA
HHHHHHHCCCCCEEECCCHHHHHEEECCCCCCCHHCEEEHHHHHHHHHHHHHCCCCCCCC
MDDELLPLSIIQEVYSECYKLEYLPIIAIPAYYNYRDPKPVYYSLQYPSLCSYSPKARNA
CCCCCCCHHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCC
STTLSDLIALIDVVHKYQKDFTLPIRECKNTILEEVSKITSFNFYHPATEENSIIKSPEI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCC
IPYQDERFRGEKRFPINASFFKGCVSIFSNSI
CCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA