| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998249
Identifier: 39998249
GI number: 39998249
Start: 3466266
End: 3466820
Strand: Direct
Name: 39998249
Synonym: GSU3159
Alternate gene names: NA
Gene position: 3466266-3466820 (Clockwise)
Preceding gene: 39998247
Following gene: 39998250
Centisome position: 90.88
GC content: 69.01
Gene sequence:
>555_bases TTGAAGGACTCCGGAGGGGAAAACCGGCCGGCCGCCGCCGCTTATACCCCTGCAGCCGTGGCGCTGATCTTGCGCCGGGA CGCCAGCGAGGTGTCGATCCTCTTCATCGAGCGCTCCCCCCACGATGGCGATCCCTGGTCCGGCGACCTGGGGTTTCCGG GCGGCAAGGTAGAGGCGGGCGATGCCGGTCCCCGTGCCGCCGCCGAACGGGAGACTCGGGAGGAACTGGGCGTTGACCTG GCCTCGGCCCGCCTGTTGGGTCGGCTTGCCGATATCGAGGGGGCCCACCTGCCGATCCGGGTGTCCTGCTTCGTCTACGG TGTGACCGGAGCACTTTCCCTTCACCCGGGCGGCGAGGTCCGCGACGCCTTCTGGGTCTCCCTGGAGGCACTGTGCGATC CCGCCCGCCACGTAACTGCGCCGGTCCGCTTCGGCGGCGAACCCTTCGAGCGACCGGCCATCATCCTTCCCGTGTCAGGA AAGCCGGTCCTGTGGGGGATCACCTACCGGCTCGTGATGCAGTTCCTGGCCCTCCTCGGCAAGGCACGGGGATGA
Upstream 100 bases:
>100_bases TACGAACATGCCGCAAAAAACAACATTCGCGAGCCACCTCGGCTTTTGCCGCCAGGAAATCCCCATGACGAACCCGACCC TTGACGAGATCGAACGCACC
Downstream 100 bases:
>100_bases GCGCCGTGGAGATCCTCTTTCGCGACCAATACCTGGTGGCCGTGCACAAGCCGGCCGGGCTCCTGGTGCACCGAAGCCCC ATCGACCGCCATGAAACCCG
Product: mutT/nudix family protein
Products: NA
Alternate protein names: MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase NUDIX Family
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKDSGGENRPAAAAYTPAAVALILRRDASEVSILFIERSPHDGDPWSGDLGFPGGKVEAGDAGPRAAAERETREELGVDL ASARLLGRLADIEGAHLPIRVSCFVYGVTGALSLHPGGEVRDAFWVSLEALCDPARHVTAPVRFGGEPFERPAIILPVSG KPVLWGITYRLVMQFLALLGKARG
Sequences:
>Translated_184_residues MKDSGGENRPAAAAYTPAAVALILRRDASEVSILFIERSPHDGDPWSGDLGFPGGKVEAGDAGPRAAAERETREELGVDL ASARLLGRLADIEGAHLPIRVSCFVYGVTGALSLHPGGEVRDAFWVSLEALCDPARHVTAPVRFGGEPFERPAIILPVSG KPVLWGITYRLVMQFLALLGKARG >Mature_184_residues MKDSGGENRPAAAAYTPAAVALILRRDASEVSILFIERSPHDGDPWSGDLGFPGGKVEAGDAGPRAAAERETREELGVDL ASARLLGRLADIEGAHLPIRVSCFVYGVTGALSLHPGGEVRDAFWVSLEALCDPARHVTAPVRFGGEPFERPAIILPVSG KPVLWGITYRLVMQFLALLGKARG
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19522; Mature: 19522
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDSGGENRPAAAAYTPAAVALILRRDASEVSILFIERSPHDGDPWSGDLGFPGGKVEAG CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECC DAGPRAAAERETREELGVDLASARLLGRLADIEGAHLPIRVSCFVYGVTGALSLHPGGEV CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECEEEEECCCCCC RDAFWVSLEALCDPARHVTAPVRFGGEPFERPAIILPVSGKPVLWGITYRLVMQFLALLG CHHHHEEHHHHHCCHHHCCCCCEECCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHH KARG CCCC >Mature Secondary Structure MKDSGGENRPAAAAYTPAAVALILRRDASEVSILFIERSPHDGDPWSGDLGFPGGKVEAG CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECC DAGPRAAAERETREELGVDLASARLLGRLADIEGAHLPIRVSCFVYGVTGALSLHPGGEV CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECEEEEECCCCCC RDAFWVSLEALCDPARHVTAPVRFGGEPFERPAIILPVSGKPVLWGITYRLVMQFLALLG CHHHHEEHHHHHCCHHHCCCCCEECCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHH KARG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA