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The map label for this gene is nrfH [H]

Identifier: 39998245

GI number: 39998245

Start: 3462332

End: 3462736

Strand: Reverse

Name: nrfH [H]

Synonym: GSU3155

Alternate gene names: 39998245

Gene position: 3462736-3462332 (Counterclockwise)

Preceding gene: 39998248

Following gene: 39998244

Centisome position: 90.79

GC content: 66.67

Gene sequence:

>405_bases
GTGGCGGTAGCGGCATTCGCGCTGGTGGGGCCGCCCCGGCTGCTGGAGCACTCGGAGTCGCCGGCATTTTGCGCCGGCTG
CCACGTGATGGGTGAGCAGCACGAGGCTTGGAGCCACGCCGGCGCCCACCGGAGGATCAGGTGCGTGGACTGCCATCTTC
CCAACGGCAATCCGGTCGCGCACTACGTCTGGAAATCCATCGACGGCATGAAGGATGTGGTGGCCTTCTATTCGGGCCAT
GTCCCCGATCCGATCAAGCTGTCGTCCCATGGGGCAAAAGTCGTCCAGCAGAACTGCGTCCGGTGCCACGAGGCGACGGT
GACCACCATGGACCGGACCCGCCAGTGTTGGGGCTGTCACCGGCAGCTGCGGCACAAGCTGACCGGCGCCATGGCCACCC
GGTGA

Upstream 100 bases:

>100_bases
CCGCAGGCCGAGCGGGCGCCGCACCCGATAGGAGAATGGAATGGGAATCTCGTTGTCACGACAGGTCCTGGCGACCACGA
TTATCACTGGTATTGCCGGT

Downstream 100 bases:

>100_bases
CGGGCCGGGACAGAGCATGCATTTAGCGCAGGAGAGGAGAGCGATATGAGTAAGAGAAGCATGAAGCGTTGGGCCGTCGT
GACTGCCCTGGCCGCAACGG

Product: cytochrome C nitrite reductase small subunit NrfH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MAVAAFALVGPPRLLEHSESPAFCAGCHVMGEQHEAWSHAGAHRRIRCVDCHLPNGNPVAHYVWKSIDGMKDVVAFYSGH
VPDPIKLSSHGAKVVQQNCVRCHEATVTTMDRTRQCWGCHRQLRHKLTGAMATR

Sequences:

>Translated_134_residues
MAVAAFALVGPPRLLEHSESPAFCAGCHVMGEQHEAWSHAGAHRRIRCVDCHLPNGNPVAHYVWKSIDGMKDVVAFYSGH
VPDPIKLSSHGAKVVQQNCVRCHEATVTTMDRTRQCWGCHRQLRHKLTGAMATR
>Mature_133_residues
AVAAFALVGPPRLLEHSESPAFCAGCHVMGEQHEAWSHAGAHRRIRCVDCHLPNGNPVAHYVWKSIDGMKDVVAFYSGHV
PDPIKLSSHGAKVVQQNCVRCHEATVTTMDRTRQCWGCHRQLRHKLTGAMATR

Specific function: Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017571
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 14831; Mature: 14700

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAAFALVGPPRLLEHSESPAFCAGCHVMGEQHEAWSHAGAHRRIRCVDCHLPNGNPVA
CCCEEEECCCCHHHHHCCCCCCHHHHHHHHCCCHHHHHHCCCCCEEEEEEEECCCCCCHH
HYVWKSIDGMKDVVAFYSGHVPDPIKLSSHGAKVVQQNCVRCHEATVTTMDRTRQCWGCH
HHHHHHCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLRHKLTGAMATR
HHHHHHHHHHHCCC
>Mature Secondary Structure 
AVAAFALVGPPRLLEHSESPAFCAGCHVMGEQHEAWSHAGAHRRIRCVDCHLPNGNPVA
CCEEEECCCCHHHHHCCCCCCHHHHHHHHCCCHHHHHHCCCCCEEEEEEEECCCCCCHH
HYVWKSIDGMKDVVAFYSGHVPDPIKLSSHGAKVVQQNCVRCHEATVTTMDRTRQCWGCH
HHHHHHCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLRHKLTGAMATR
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]