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The map label for this gene is pyrK [H]

Identifier: 39998149

GI number: 39998149

Start: 3361556

End: 3362392

Strand: Reverse

Name: pyrK [H]

Synonym: GSU3058

Alternate gene names: 39998149

Gene position: 3362392-3361556 (Counterclockwise)

Preceding gene: 39998150

Following gene: 39998148

Centisome position: 88.16

GC content: 64.76

Gene sequence:

>837_bases
ATGTTCGATGTCATCAGCAACGAAGTCCTTGCCCCGAATCTCCACCAGTTGGTGGTCCGGGCACCCCGGATCGCATCGTC
CCGCCTGCCGGGCCAGTTTGTCATAGTCAGGGCCGAGGCTGGCGAGGAACGGATTCCTCTTACCATCGGCGATGCCGATG
CAGCGGCAGGGACCATTACTCTCTTTGTCCAGGCCATCGGGGCCTCCACCCAGCGCATCGTTGCCGTGCCCGCCGGAGGC
CGGCTCCGCGATGTGGCCGGTCCTCTGGGCCTGCCGACCCACATCAGGAACTGGGGGCGCGTCGCCTGCATCGGCGGAGG
GGTCGGAACGGCGGTTCTCTTTCCGCTGGCAAAGGCTCTGGCCGAAGCAGGCAATGAGGTGACTACCATCATCGGAGGCA
GATCGGCCCGGTACATCATCCTCGCGGATGAACTGGGCGCCCTGTCCCGGGAACTTCTGGTAACGACCGAGGACGGAAGT
CTGGGCGTTCAGGGATTCGTGACCCAACCTCTGGAGGGGCTCGTGGCCGATCCGGCGCGACGGCCCGGTGCGGTCTTTGC
CGTGGGGCCTGTGCCGATGATGAGGGCGGTTGCCGAATTGACCCGTCCCCACGGCATCGAAACGGTGGTGAGCCTCAACC
CGATCATGATCGACGGTACCGGCATGTGCGGCGGGTGCCGGGTTCTGGTGGGAGGCGAAGCAAAGTTCGCCTGTGTGGAT
GGTCCGGAATTCGACGGCCATCTGGTGGATTTCGACAACCTGGCCGATCGGCTGGCAACCTATCGCGAGTCCGAGGCCAG
TCACGTCTGCCGGGTCGCCGGAAAGGAGGTCGCATGA

Upstream 100 bases:

>100_bases
TCCCTCCGTTACAACGACGTAACCCCTGCGCCCCACGAGTCCATGAAGGCTCCGGCCGCCGCGAGATACCGGCGTTCATT
TCTCCAGGAAAGGTGAGCGT

Downstream 100 bases:

>100_bases
GCACGGGTATGACCACCAGAGAGCGATTGGCCATTGACCGGGTCCACATGGTCGAACTCGATGCCGACAGCCGCAGCCGA
AATTTTGACGAAGTGAACCG

Product: ferredoxin-NADP(+) reductase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MFDVISNEVLAPNLHQLVVRAPRIASSRLPGQFVIVRAEAGEERIPLTIGDADAAAGTITLFVQAIGASTQRIVAVPAGG
RLRDVAGPLGLPTHIRNWGRVACIGGGVGTAVLFPLAKALAEAGNEVTTIIGGRSARYIILADELGALSRELLVTTEDGS
LGVQGFVTQPLEGLVADPARRPGAVFAVGPVPMMRAVAELTRPHGIETVVSLNPIMIDGTGMCGGCRVLVGGEAKFACVD
GPEFDGHLVDFDNLADRLATYRESEASHVCRVAGKEVA

Sequences:

>Translated_278_residues
MFDVISNEVLAPNLHQLVVRAPRIASSRLPGQFVIVRAEAGEERIPLTIGDADAAAGTITLFVQAIGASTQRIVAVPAGG
RLRDVAGPLGLPTHIRNWGRVACIGGGVGTAVLFPLAKALAEAGNEVTTIIGGRSARYIILADELGALSRELLVTTEDGS
LGVQGFVTQPLEGLVADPARRPGAVFAVGPVPMMRAVAELTRPHGIETVVSLNPIMIDGTGMCGGCRVLVGGEAKFACVD
GPEFDGHLVDFDNLADRLATYRESEASHVCRVAGKEVA
>Mature_278_residues
MFDVISNEVLAPNLHQLVVRAPRIASSRLPGQFVIVRAEAGEERIPLTIGDADAAAGTITLFVQAIGASTQRIVAVPAGG
RLRDVAGPLGLPTHIRNWGRVACIGGGVGTAVLFPLAKALAEAGNEVTTIIGGRSARYIILADELGALSRELLVTTEDGS
LGVQGFVTQPLEGLVADPARRPGAVFAVGPVPMMRAVAELTRPHGIETVVSLNPIMIDGTGMCGGCRVLVGGEAKFACVD
GPEFDGHLVDFDNLADRLATYRESEASHVCRVAGKEVA

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 28901; Mature: 28901

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDVISNEVLAPNLHQLVVRAPRIASSRLPGQFVIVRAEAGEERIPLTIGDADAAAGTIT
CCCCCCCCCCCCCHHHHHHHCCCHHHCCCCCEEEEEEECCCCCCCCEEECCCCCCHHHHE
LFVQAIGASTQRIVAVPAGGRLRDVAGPLGLPTHIRNWGRVACIGGGVGTAVLFPLAKAL
EEHHHHCCCCEEEEEECCCCCCHHHCCCCCCCHHHCCCCCEEEEECCHHHHHHHHHHHHH
AEAGNEVTTIIGGRSARYIILADELGALSRELLVTTEDGSLGVQGFVTQPLEGLVADPAR
HHCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCHHHHHCCCCC
RPGAVFAVGPVPMMRAVAELTRPHGIETVVSLNPIMIDGTGMCGGCRVLVGGEAKFACVD
CCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCEEEEECCCEEEEEEC
GPEFDGHLVDFDNLADRLATYRESEASHVCRVAGKEVA
CCCCCCEEECHHHHHHHHHHHHCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MFDVISNEVLAPNLHQLVVRAPRIASSRLPGQFVIVRAEAGEERIPLTIGDADAAAGTIT
CCCCCCCCCCCCCHHHHHHHCCCHHHCCCCCEEEEEEECCCCCCCCEEECCCCCCHHHHE
LFVQAIGASTQRIVAVPAGGRLRDVAGPLGLPTHIRNWGRVACIGGGVGTAVLFPLAKAL
EEHHHHCCCCEEEEEECCCCCCHHHCCCCCCCHHHCCCCCEEEEECCHHHHHHHHHHHHH
AEAGNEVTTIIGGRSARYIILADELGALSRELLVTTEDGSLGVQGFVTQPLEGLVADPAR
HHCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCHHHHHCCCCC
RPGAVFAVGPVPMMRAVAELTRPHGIETVVSLNPIMIDGTGMCGGCRVLVGGEAKFACVD
CCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCEEEEECCCEEEEEEC
GPEFDGHLVDFDNLADRLATYRESEASHVCRVAGKEVA
CCCCCCEEECHHHHHHHHHHHHCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]