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The map label for this gene is 39998150

Identifier: 39998150

GI number: 39998150

Start: 3362756

End: 3363637

Strand: Reverse

Name: 39998150

Synonym: GSU3059

Alternate gene names: NA

Gene position: 3363637-3362756 (Counterclockwise)

Preceding gene: 39998153

Following gene: 39998149

Centisome position: 88.19

GC content: 62.13

Gene sequence:

>882_bases
ATGCCCACCTACATCGAACCCGTGTTCCGTCCGCCGAGCGAGGCGCGCAGTCTCATCTTTCAGATAACCATCGGCTGTTC
CCAGAACCACTGCGTCTTCTGCGGCATGTACAAGATGAAGCGGTTCCGCCTGAAGCCCGAAGCCGAAGTCATGGCTGAGA
TCGACGGCATTCCGGCACGCTATCGCCCTGCTGTGGACCGGGTATTCCTTGCCGACGGCGATGCCCTTGTCTATCCCTTC
GACGGGCTTGCCGCCATCCTCGACCGGCTGGCTGCGGTGTTCCCTAACCTCACGCGGGTGGGTTCCTATGCATCGCCCCG
GAGCCTGACCACCAAGAACGTCGAGGAACTCAGGCACCTGCGGGAGAAAAAGCTCCGCATCCTCTATTTCGGGCTGGAAT
CGGGGGACGACGCGACGCTGGCCGCGGTCAACAAGGGATTTACGGCGGAAGAGATGGTCCGGGAAGCGTGCAAGGCCCGG
GAGGCTGGCATGAAGCTCTCGGTGACTGCCATCCTGGGACTGGCCGGTCGCAGTCGCAGTCTTGAGCACGCCCGGGCCAC
GGCGGAATGGGTCAACCGGGTCAGTCCGGAGTATTTTTCCCTCCTCACCCTCTTCCACCGTCACAACGACGAATTCATCC
GCACCCTCGACCAGTGCACAAGACGGGAGCTCTTGCACGAAGCGCGGGAGCTCCTTGCCCATCTGGCTCCGGCCAGGACG
ATTCTTCGCTCCAACCATGTCTCCAATTTCCTGGAACTGGCCGGCAGCTACCCCAAGGACCGGGAACGGCTCATTGCCGA
GGTGGATACCGCTCTGGCACGGCTCGGCAGAATGCCCGGCTTCCTCGACGAGGTTCCCGCCTACGGGGAAGAATACTACT
GA

Upstream 100 bases:

>100_bases
CAAAGTAGAGGATCAAGAGTGTGCTGTCAAGCTTTGAATGGATGGGAGGATCGCCTGGTGCGGGACTATCGGCCGGCGTT
CGGGGGGTGAGGAAGTGACC

Downstream 100 bases:

>100_bases
GGCGGAGTCCTGTTCCTTCCGCGGGCCTGGTCGCGGGCGGACAGGCGGCGCCGTGCCGGAGCTTTCGCATTGTAGCATGC
CGATATTATTGGCAGTATTC

Product: radical SAM protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Fe-S Oxidoreductase; Oxygen-Independent Coproporphyrinogen III Oxidase; Radical SAM Family Protein; Radical Sam Domain Protein; Coproporphyrinogen Oxidase; Elongator /MiaB/NifB; Fe-S Oxidoreductase Family Protein; Radical SAM Superfamily Lipoprotein; Oxygen-Independent Coproporphyrinogen III; Radical SAM

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPTYIEPVFRPPSEARSLIFQITIGCSQNHCVFCGMYKMKRFRLKPEAEVMAEIDGIPARYRPAVDRVFLADGDALVYPF
DGLAAILDRLAAVFPNLTRVGSYASPRSLTTKNVEELRHLREKKLRILYFGLESGDDATLAAVNKGFTAEEMVREACKAR
EAGMKLSVTAILGLAGRSRSLEHARATAEWVNRVSPEYFSLLTLFHRHNDEFIRTLDQCTRRELLHEARELLAHLAPART
ILRSNHVSNFLELAGSYPKDRERLIAEVDTALARLGRMPGFLDEVPAYGEEYY

Sequences:

>Translated_293_residues
MPTYIEPVFRPPSEARSLIFQITIGCSQNHCVFCGMYKMKRFRLKPEAEVMAEIDGIPARYRPAVDRVFLADGDALVYPF
DGLAAILDRLAAVFPNLTRVGSYASPRSLTTKNVEELRHLREKKLRILYFGLESGDDATLAAVNKGFTAEEMVREACKAR
EAGMKLSVTAILGLAGRSRSLEHARATAEWVNRVSPEYFSLLTLFHRHNDEFIRTLDQCTRRELLHEARELLAHLAPART
ILRSNHVSNFLELAGSYPKDRERLIAEVDTALARLGRMPGFLDEVPAYGEEYY
>Mature_292_residues
PTYIEPVFRPPSEARSLIFQITIGCSQNHCVFCGMYKMKRFRLKPEAEVMAEIDGIPARYRPAVDRVFLADGDALVYPFD
GLAAILDRLAAVFPNLTRVGSYASPRSLTTKNVEELRHLREKKLRILYFGLESGDDATLAAVNKGFTAEEMVREACKARE
AGMKLSVTAILGLAGRSRSLEHARATAEWVNRVSPEYFSLLTLFHRHNDEFIRTLDQCTRRELLHEARELLAHLAPARTI
LRSNHVSNFLELAGSYPKDRERLIAEVDTALARLGRMPGFLDEVPAYGEEYY

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33150; Mature: 33018

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTYIEPVFRPPSEARSLIFQITIGCSQNHCVFCGMYKMKRFRLKPEAEVMAEIDGIPAR
CCCCCCCCCCCHHHHHHEEEEEEECCCCCCEEEEEHHHHHHHCCCCHHHHHHHHCCCCCC
YRPAVDRVFLADGDALVYPFDGLAAILDRLAAVFPNLTRVGSYASPRSLTTKNVEELRHL
CCHHHHEEEEECCCEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHH
REKKLRILYFGLESGDDATLAAVNKGFTAEEMVREACKAREAGMKLSVTAILGLAGRSRS
HHHCEEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCCC
LEHARATAEWVNRVSPEYFSLLTLFHRHNDEFIRTLDQCTRRELLHEARELLAHLAPART
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILRSNHVSNFLELAGSYPKDRERLIAEVDTALARLGRMPGFLDEVPAYGEEYY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure 
PTYIEPVFRPPSEARSLIFQITIGCSQNHCVFCGMYKMKRFRLKPEAEVMAEIDGIPAR
CCCCCCCCCCHHHHHHEEEEEEECCCCCCEEEEEHHHHHHHCCCCHHHHHHHHCCCCCC
YRPAVDRVFLADGDALVYPFDGLAAILDRLAAVFPNLTRVGSYASPRSLTTKNVEELRHL
CCHHHHEEEEECCCEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHH
REKKLRILYFGLESGDDATLAAVNKGFTAEEMVREACKAREAGMKLSVTAILGLAGRSRS
HHHCEEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCCC
LEHARATAEWVNRVSPEYFSLLTLFHRHNDEFIRTLDQCTRRELLHEARELLAHLAPART
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILRSNHVSNFLELAGSYPKDRERLIAEVDTALARLGRMPGFLDEVPAYGEEYY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA