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The map label for this gene is ybeT [H]

Identifier: 39997542

GI number: 39997542

Start: 2684162

End: 2684905

Strand: Reverse

Name: ybeT [H]

Synonym: GSU2447

Alternate gene names: 39997542

Gene position: 2684905-2684162 (Counterclockwise)

Preceding gene: 39997543

Following gene: 39997541

Centisome position: 70.39

GC content: 70.56

Gene sequence:

>744_bases
GTGACGGCACTGGCCCTGTCGCTGCTGGCGGTTGCGCCGGTGCCGGCCGCTTCCCGTACGGCAAAGGGCGCAAAGGCCGC
CAACGGGTATGCCGCCACCCAGGCCGCGGCCCGGCGGGGGGATGCCAAAGCGGCCTTCAGGCTTGCGCTGATGCACCTGG
ACGGCAGCGGCGCCCCGCGCAAGCCGACAGAGGCGGCGCGGTACATGAAAATGGCGGCCGAGCGCGGCCACGTGCGGGCC
CAGTACTATCTGGGCACCTTCTACCACGAGGGGACCGGGGTCAAGCGCGACACCTCGGCCGCGGCCCGCTGGATCGGCAA
GGCGGCCGCGGGGGGCGATGCCGAGGCCCAGTACGCGTACGGCATGGTCCTTCTCTCCGGTGACGGCGTGCCCGTGGACA
AGGTGCGGGCCATCGAGTGGTTGGGCAAGGCATCCCGCCAGGGGAACGAGGGCGCCCGGGACGTGCTCCAGGAGCTGGTC
GCCTTCCAGGGCCGGCCGACGGAAATCCGCTCCCTGGAGCCGACCATCTCCTCTCCCGTTCCCGCTCCCCGGCCGGAGGC
GGGCACCACGGGGGCGCGCCTCGAAGGCAAGGGGGTAGTCCTGGACCAGGGCGAGTTCAGCCTCAAGTTCTCCATGCCCG
GGCTGGGAAACACCGGTGACCCCTACCGGACCACGACCGACGAGAAACTCTGGAATCATCTGCAGGGGGGGAGCTTCGAG
ATCATCTACCGGCCGGGTAAGTAG

Upstream 100 bases:

>100_bases
CGCGAAGCGGTGGGATTCCTGCGCACGGTGAAAGAGTATGTGGAAGATCCGGAGGAGCTGTTCCTTGAGGGGTAGGGTTG
CGGTCATGGTGTGCCGGGTC

Downstream 100 bases:

>100_bases
CCGGGCTGTGGCTCAAGTCTCGGCTGTTCACCCCCCTGCTCGCGCTGCTCGCTTCCCCCCTACAACGTAGGGGGGATTGA
GGGGGGGCCACGTGCCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTALALSLLAVAPVPAASRTAKGAKAANGYAATQAAARRGDAKAAFRLALMHLDGSGAPRKPTEAARYMKMAAERGHVRA
QYYLGTFYHEGTGVKRDTSAAARWIGKAAAGGDAEAQYAYGMVLLSGDGVPVDKVRAIEWLGKASRQGNEGARDVLQELV
AFQGRPTEIRSLEPTISSPVPAPRPEAGTTGARLEGKGVVLDQGEFSLKFSMPGLGNTGDPYRTTTDEKLWNHLQGGSFE
IIYRPGK

Sequences:

>Translated_247_residues
MTALALSLLAVAPVPAASRTAKGAKAANGYAATQAAARRGDAKAAFRLALMHLDGSGAPRKPTEAARYMKMAAERGHVRA
QYYLGTFYHEGTGVKRDTSAAARWIGKAAAGGDAEAQYAYGMVLLSGDGVPVDKVRAIEWLGKASRQGNEGARDVLQELV
AFQGRPTEIRSLEPTISSPVPAPRPEAGTTGARLEGKGVVLDQGEFSLKFSMPGLGNTGDPYRTTTDEKLWNHLQGGSFE
IIYRPGK
>Mature_246_residues
TALALSLLAVAPVPAASRTAKGAKAANGYAATQAAARRGDAKAAFRLALMHLDGSGAPRKPTEAARYMKMAAERGHVRAQ
YYLGTFYHEGTGVKRDTSAAARWIGKAAAGGDAEAQYAYGMVLLSGDGVPVDKVRAIEWLGKASRQGNEGARDVLQELVA
FQGRPTEIRSLEPTISSPVPAPRPEAGTTGARLEGKGVVLDQGEFSLKFSMPGLGNTGDPYRTTTDEKLWNHLQGGSFEI
IYRPGK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeQ [H]

Homologues:

Organism=Escherichia coli, GI1786867, Length=127, Percent_Identity=36.2204724409449, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI87081769, Length=133, Percent_Identity=33.8345864661654, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 26116; Mature: 25985

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALALSLLAVAPVPAASRTAKGAKAANGYAATQAAARRGDAKAAFRLALMHLDGSGAPR
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHEEEEEEEEECCCCCCC
KPTEAARYMKMAAERGHVRAQYYLGTFYHEGTGVKRDTSAAARWIGKAAAGGDAEAQYAY
CHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEE
GMVLLSGDGVPVDKVRAIEWLGKASRQGNEGARDVLQELVAFQGRPTEIRSLEPTISSPV
EEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCC
PAPRPEAGTTGARLEGKGVVLDQGEFSLKFSMPGLGNTGDPYRTTTDEKLWNHLQGGSFE
CCCCCCCCCCCCEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEE
IIYRPGK
EEECCCC
>Mature Secondary Structure 
TALALSLLAVAPVPAASRTAKGAKAANGYAATQAAARRGDAKAAFRLALMHLDGSGAPR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHEEEEEEEEECCCCCCC
KPTEAARYMKMAAERGHVRAQYYLGTFYHEGTGVKRDTSAAARWIGKAAAGGDAEAQYAY
CHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEE
GMVLLSGDGVPVDKVRAIEWLGKASRQGNEGARDVLQELVAFQGRPTEIRSLEPTISSPV
EEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCC
PAPRPEAGTTGARLEGKGVVLDQGEFSLKFSMPGLGNTGDPYRTTTDEKLWNHLQGGSFE
CCCCCCCCCCCCEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEE
IIYRPGK
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]