| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is yqeZ [H]
Identifier: 39997526
GI number: 39997526
Start: 2665867
End: 2667168
Strand: Reverse
Name: yqeZ [H]
Synonym: GSU2431
Alternate gene names: 39997526
Gene position: 2667168-2665867 (Counterclockwise)
Preceding gene: 39997527
Following gene: 39997525
Centisome position: 69.93
GC content: 67.36
Gene sequence:
>1302_bases ATGGGGGGATCCCGGCGGGGGATCCGGATCGGCGCGCTGATCGCCTGGTGCCTCATGATCTGCACCGGCGCGGCGCTCCT GGCGTCCACCGGGGGCGATGTGCGGGTGGTCGGCCTCAGGGGGGCCGTGAACCCGGTTACCGCCTCATTCCTCAAGCGGA ACCTGGACGATGCGGCCCGGAAGGGGGATCGGCTCGTGCTGGTGGAGATGGATACCCCCGGCGGCCTCGACACGGCCATG CGGGAGATCGTCAAGGATATCCTGGCCAGCCCCGTGCCCGTGGCGGTTTACGTGGCGCCGGCCGGGGCCCGGGCCGCCTC GGCGGGGGCAATCATCACGCTGGCGGCCGATATCGCCGCCATGGCGCCGGGGACGAACATCGGCGCGGCCCATCCCGTGG CCATCGGCGAGAAGCAGGACAAGGTCATGGAGCAGAAGGTACTCAACGATGCCGAGGCTTACGTGGACGGCATCGCTTCC CGCCGGGGGCGCAATGCCGAGGTGGCGCGGCGGATGGTGCGCGAAAGCCTGTCGCTCCCCGCTGAAAAGGCCCTGGAAGA GAAGATGATTGACCTGATCGCCGCCGACCGGTCCGCTCTCTTTGCCCAACTGGAGGGGCGGCCGGTGTCCCGTCCGGGGG GCGACACGGTCCTGCGGCTGGCCGGGGCTCCGGTCCGGGAGGCGGAGATGACGACCCGGGAGCGGATCCTCGACGCCATC GGCAATCCCAACGTGGCCTACGTCCTCATGATGCTCGGGTTCCTGGGGCTGTTCTTCGAGTTGTCGAACCCCGGCGTGAT CCTGCCCGGCGTCATCGGCGGCATTGCCCTGATCCTGGCCTTCTTCGCCTTCCAGACCCTGCCGGTCAACTATGCCGGCG TGCTTCTCATCCTGCTTGCGCTCATCCTTTTCATTGCCGAGATCAAGGTGGTCTCGGGCGGCATGCTGACGGTGGGAGGC GTCATTGCCATGGTTCTCGGATCGATCCTTCTCTTCGAGTCGCCGGAGCCCTATCTCCGGGTTTCCTGGCAGGTGATCGC CGTGACGGTGGCTGCCGTGTCGGCTTTTTCGATCTTCGCCGTCACCATGGCGGTCCGGGCGCATCGCCGCAAGCCCACCA CCGGCGGCGAAGGCCTGGTGGGGGAGACCGGCAAGGCTCTATCCCCCATCGCTCCCGAGGGGCGGGTCTTCATCCACGGC GAATACTGGGACGCCTGGAGCGATGAACCCCTGGCCGAGGGGGACCGGGTAATGGTGGTTGCGGTGGACGGGATGAGGGT CAAGGTGAAAAAGTTATCGTAG
Upstream 100 bases:
>100_bases GCATGCCGGCCTTCGGCGAAGCGATGATCCCGCCGGCCGATGCCCTGAAGATCGGGGAGTACGTCGTGGCGAGCTTCCCA TGAGAGCCCTCGTTCCGGCC
Downstream 100 bases:
>100_bases GGGCGATCCTTGCGATCGCCCATTTCCAGACGGATGCAATCATGGGCGAAGAGACGAATTCGCCCCCACGTAAGGGAGGT TTCCCCATGTTCGATATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MGGSRRGIRIGALIAWCLMICTGAALLASTGGDVRVVGLRGAVNPVTASFLKRNLDDAARKGDRLVLVEMDTPGGLDTAM REIVKDILASPVPVAVYVAPAGARAASAGAIITLAADIAAMAPGTNIGAAHPVAIGEKQDKVMEQKVLNDAEAYVDGIAS RRGRNAEVARRMVRESLSLPAEKALEEKMIDLIAADRSALFAQLEGRPVSRPGGDTVLRLAGAPVREAEMTTRERILDAI GNPNVAYVLMMLGFLGLFFELSNPGVILPGVIGGIALILAFFAFQTLPVNYAGVLLILLALILFIAEIKVVSGGMLTVGG VIAMVLGSILLFESPEPYLRVSWQVIAVTVAAVSAFSIFAVTMAVRAHRRKPTTGGEGLVGETGKALSPIAPEGRVFIHG EYWDAWSDEPLAEGDRVMVVAVDGMRVKVKKLS
Sequences:
>Translated_433_residues MGGSRRGIRIGALIAWCLMICTGAALLASTGGDVRVVGLRGAVNPVTASFLKRNLDDAARKGDRLVLVEMDTPGGLDTAM REIVKDILASPVPVAVYVAPAGARAASAGAIITLAADIAAMAPGTNIGAAHPVAIGEKQDKVMEQKVLNDAEAYVDGIAS RRGRNAEVARRMVRESLSLPAEKALEEKMIDLIAADRSALFAQLEGRPVSRPGGDTVLRLAGAPVREAEMTTRERILDAI GNPNVAYVLMMLGFLGLFFELSNPGVILPGVIGGIALILAFFAFQTLPVNYAGVLLILLALILFIAEIKVVSGGMLTVGG VIAMVLGSILLFESPEPYLRVSWQVIAVTVAAVSAFSIFAVTMAVRAHRRKPTTGGEGLVGETGKALSPIAPEGRVFIHG EYWDAWSDEPLAEGDRVMVVAVDGMRVKVKKLS >Mature_432_residues GGSRRGIRIGALIAWCLMICTGAALLASTGGDVRVVGLRGAVNPVTASFLKRNLDDAARKGDRLVLVEMDTPGGLDTAMR EIVKDILASPVPVAVYVAPAGARAASAGAIITLAADIAAMAPGTNIGAAHPVAIGEKQDKVMEQKVLNDAEAYVDGIASR RGRNAEVARRMVRESLSLPAEKALEEKMIDLIAADRSALFAQLEGRPVSRPGGDTVLRLAGAPVREAEMTTRERILDAIG NPNVAYVLMMLGFLGLFFELSNPGVILPGVIGGIALILAFFAFQTLPVNYAGVLLILLALILFIAEIKVVSGGMLTVGGV IAMVLGSILLFESPEPYLRVSWQVIAVTVAAVSAFSIFAVTMAVRAHRRKPTTGGEGLVGETGKALSPIAPEGRVFIHGE YWDAWSDEPLAEGDRVMVVAVDGMRVKVKKLS
Specific function: Unknown
COG id: COG1030
COG function: function code O; Membrane-bound serine protease (ClpP class)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002810 - InterPro: IPR002825 [H]
Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]
EC number: NA
Molecular weight: Translated: 45539; Mature: 45408
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGSRRGIRIGALIAWCLMICTGAALLASTGGDVRVVGLRGAVNPVTASFLKRNLDDAAR CCCCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCHHHHHC KGDRLVLVEMDTPGGLDTAMREIVKDILASPVPVAVYVAPAGARAASAGAIITLAADIAA CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEHHHHHH MAPGTNIGAAHPVAIGEKQDKVMEQKVLNDAEAYVDGIASRRGRNAEVARRMVRESLSLP HCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC AEKALEEKMIDLIAADRSALFAQLEGRPVSRPGGDTVLRLAGAPVREAEMTTRERILDAI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH GNPNVAYVLMMLGFLGLFFELSNPGVILPGVIGGIALILAFFAFQTLPVNYAGVLLILLA CCCCHHHHHHHHHHHHHHEECCCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LILFIAEIKVVSGGMLTVGGVIAMVLGSILLFESPEPYLRVSWQVIAVTVAAVSAFSIFA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH VTMAVRAHRRKPTTGGEGLVGETGKALSPIAPEGRVFIHGEYWDAWSDEPLAEGDRVMVV HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE AVDGMRVKVKKLS EECCCEEEEEECC >Mature Secondary Structure GGSRRGIRIGALIAWCLMICTGAALLASTGGDVRVVGLRGAVNPVTASFLKRNLDDAAR CCCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCHHHHHC KGDRLVLVEMDTPGGLDTAMREIVKDILASPVPVAVYVAPAGARAASAGAIITLAADIAA CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEHHHHHH MAPGTNIGAAHPVAIGEKQDKVMEQKVLNDAEAYVDGIASRRGRNAEVARRMVRESLSLP HCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC AEKALEEKMIDLIAADRSALFAQLEGRPVSRPGGDTVLRLAGAPVREAEMTTRERILDAI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH GNPNVAYVLMMLGFLGLFFELSNPGVILPGVIGGIALILAFFAFQTLPVNYAGVLLILLA CCCCHHHHHHHHHHHHHHEECCCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LILFIAEIKVVSGGMLTVGGVIAMVLGSILLFESPEPYLRVSWQVIAVTVAAVSAFSIFA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH VTMAVRAHRRKPTTGGEGLVGETGKALSPIAPEGRVFIHGEYWDAWSDEPLAEGDRVMVV HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE AVDGMRVKVKKLS EECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]