Click here to switch to the map view.

The map label for this gene is 39997527

Identifier: 39997527

GI number: 39997527

Start: 2667186

End: 2667500

Strand: Reverse

Name: 39997527

Synonym: GSU2432

Alternate gene names: NA

Gene position: 2667500-2667186 (Counterclockwise)

Preceding gene: 39997528

Following gene: 39997526

Centisome position: 69.94

GC content: 73.33

Gene sequence:

>315_bases
ATGAGAGGGCTTGCCCCGGTGGCCGCCTGCATGGCCCTGGCCCTGGCGGCCGGCTGCAGCGGCGGGTCCGGCGCTGGAGG
CGGCGAGCTGTTCGCCACCCACTGCGCCGGCTGCCATCCGCAGGGAGGCAACACCGTCCACCCGGAAAAGACCCTGGCGC
GGGCCCGGCGGGAGGCCAACGGCATCCGGACCGTCCGGGACGTGGCGGCCTACATCCGCAACCCGGGTCCGGGCATGCCG
GCCTTCGGCGAAGCGATGATCCCGCCGGCCGATGCCCTGAAGATCGGGGAGTACGTCGTGGCGAGCTTCCCATGA

Upstream 100 bases:

>100_bases
AAATGATCGAGAGCATGAAGAAATTCGGCTCGTCCGGCGAGAAAGACGAGAAGAAGGAGTCCGGGGCTCCCGCGCCCGCC
CTCGAGGGGGGGCAATCGTC

Downstream 100 bases:

>100_bases
GAGCCCTCGTTCCGGCCATGGGGGGATCCCGGCGGGGGATCCGGATCGGCGCGCTGATCGCCTGGTGCCTCATGATCTGC
ACCGGCGCGGCGCTCCTGGC

Product: cytochrome C

Products: NA

Alternate protein names: Cytochrome C Family Protein; Lipoprotein Cytochrome C

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MRGLAPVAACMALALAAGCSGGSGAGGGELFATHCAGCHPQGGNTVHPEKTLARARREANGIRTVRDVAAYIRNPGPGMP
AFGEAMIPPADALKIGEYVVASFP

Sequences:

>Translated_104_residues
MRGLAPVAACMALALAAGCSGGSGAGGGELFATHCAGCHPQGGNTVHPEKTLARARREANGIRTVRDVAAYIRNPGPGMP
AFGEAMIPPADALKIGEYVVASFP
>Mature_104_residues
MRGLAPVAACMALALAAGCSGGSGAGGGELFATHCAGCHPQGGNTVHPEKTLARARREANGIRTVRDVAAYIRNPGPGMP
AFGEAMIPPADALKIGEYVVASFP

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10431; Mature: 10431

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLAPVAACMALALAAGCSGGSGAGGGELFATHCAGCHPQGGNTVHPEKTLARARREAN
CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC
GIRTVRDVAAYIRNPGPGMPAFGEAMIPPADALKIGEYVVASFP
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRGLAPVAACMALALAAGCSGGSGAGGGELFATHCAGCHPQGGNTVHPEKTLARARREAN
CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC
GIRTVRDVAAYIRNPGPGMPAFGEAMIPPADALKIGEYVVASFP
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA