Click here to switch to the map view.

The map label for this gene is rcp1 [H]

Identifier: 39997385

GI number: 39997385

Start: 2504545

End: 2504955

Strand: Reverse

Name: rcp1 [H]

Synonym: GSU2287

Alternate gene names: 39997385

Gene position: 2504955-2504545 (Counterclockwise)

Preceding gene: 39997386

Following gene: 39997383

Centisome position: 65.68

GC content: 57.42

Gene sequence:

>411_bases
ATGGCTGGCACTGAAGAAATAACCATGCTGCTTGTGGAGGATAATCCCGACGAGGAGTTTCTAACTCGGCGGGTGCTTAA
AAAATTCCCGGCTCTTTCGCGGATCGATGTGGTAAAGGACGGTGTCGAAGCCCTTCGCTATCTGACGGTTGCTGAGAACC
GGGTGCCGCCCCGGTTCGTTCTCCTGGATCTGAAGCTGCCAAGGGTGGACGGAGTCGATGTCCTGCGCGAGATGCGAAAG
CGGGAGGAAACCCGCGACATTCCCGTGGTAGTGCTCACATCGTCGGATCATGAGCGGGACATGGAAGCCTGCGGCAAGTT
GGGCGCGGCCCATTTTCTTCAGAAGCCGTTGGATGCAGGAAGGATGTCGGAAGTGCTCAATCGGCTGGGAATACCCGCTC
GGTCTGCCTGA

Upstream 100 bases:

>100_bases
AGGAAAAGGAACTATGGTTGTCTGCTCGTTCCAGTCTTCGGATATGGGTTGAGCGCGGTTTTTGCATCTAACGGGTAACA
GGTGGAGAGGGGAGGACGTC

Downstream 100 bases:

>100_bases
GCGGGCGATTCAGTCGCCGGTAGCCATAAGTAAAAAGGCGGGGATGCCCCCGCCTTTTGTACGTTTGAGAAGTGTCGGCC
GGCGCCGGTTCAACGCAGGT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MAGTEEITMLLVEDNPDEEFLTRRVLKKFPALSRIDVVKDGVEALRYLTVAENRVPPRFVLLDLKLPRVDGVDVLREMRK
REETRDIPVVVLTSSDHERDMEACGKLGAAHFLQKPLDAGRMSEVLNRLGIPARSA

Sequences:

>Translated_136_residues
MAGTEEITMLLVEDNPDEEFLTRRVLKKFPALSRIDVVKDGVEALRYLTVAENRVPPRFVLLDLKLPRVDGVDVLREMRK
REETRDIPVVVLTSSDHERDMEACGKLGAAHFLQKPLDAGRMSEVLNRLGIPARSA
>Mature_135_residues
AGTEEITMLLVEDNPDEEFLTRRVLKKFPALSRIDVVKDGVEALRYLTVAENRVPPRFVLLDLKLPRVDGVDVLREMRKR
EETRDIPVVVLTSSDHERDMEACGKLGAAHFLQKPLDAGRMSEVLNRLGIPARSA

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 15364; Mature: 15233

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTEEITMLLVEDNPDEEFLTRRVLKKFPALSRIDVVKDGVEALRYLTVAENRVPPRFV
CCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
LLDLKLPRVDGVDVLREMRKREETRDIPVVVLTSSDHERDMEACGKLGAAHFLQKPLDAG
EEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCH
RMSEVLNRLGIPARSA
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AGTEEITMLLVEDNPDEEFLTRRVLKKFPALSRIDVVKDGVEALRYLTVAENRVPPRFV
CCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
LLDLKLPRVDGVDVLREMRKREETRDIPVVVLTSSDHERDMEACGKLGAAHFLQKPLDAG
EEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCH
RMSEVLNRLGIPARSA
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]