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The map label for this gene is yqfF [H]

Identifier: 39997383

GI number: 39997383

Start: 2500532

End: 2502943

Strand: Reverse

Name: yqfF [H]

Synonym: GSU2285

Alternate gene names: 39997383

Gene position: 2502943-2500532 (Counterclockwise)

Preceding gene: 39997385

Following gene: 308513315

Centisome position: 65.62

GC content: 59.78

Gene sequence:

>2412_bases
ATGCCCTCTCAAAGCGGCAACAACGATCGGGACATACGCGGCTCACTGTCGCTCTCGCTGGGACGCCTTGTGGACAACCT
GTTCGAACGGTTCTCCAGTCCGAGGCACGAAAACAGAAACCGGCGGATTCTCCTGGTCGCCACGGCCATCATTCTCACGT
TCGTCATTTTCCCCCGTCAGGAGTTCATGTCTGTCCGCCATGAGGCGGGCGACATTGCCTCCACCGACATCCGTGCTACC
CGCGACCATCTGCTGGAAGACCGCGCACTGACCGAACGCAAGCGCAAGGAGGCGGAGAACGCCGTTCCTTTTGTGTACAG
CTTCGACCAGCAGGCGGCGGCCGAACTCGTGAAGCGGTTCGAGCAGGCGCTCGTGGTGCTGCGGGAGGCCGCGACCCATC
AGCAGGACGCTGAGCAGGCCTCCGTGGATGAGGCGTTGAGCGACATCTTCGGATTCGCTCCTTCCCGGGCGGAGATTGCC
GCGCTTATGCGGCTCGGCTCCAGTTCCGAGCTGATCGAGCAGGTATCTCAACTGGCCGATCACCTCTACAGCCACAAGAT
CATTGCTGACAAGGGGCGGTTCGCCGCCGACAGCGCCCACGGCATTACGCTTGTGGATTCCCGCTCGGGGGAGCCGCTGG
GCAAGATGGAGTACGCGGTCGCGCCGCTCAGCGTCGAAGAGGCCGGTGCTGCGCTCAAGGAAGTACGCATCGCCGCCGGC
GGGGTTTCGCAGCGGGAAACCGAGTCGCTCAAGGGGCTCGTGGCCAAAGCGGTGAAGCCCAATCTTTCCTTTAACGATGA
TCTGACCATCCGCAACAGGATGCAGGCCAGGGAAAGCGTCCGTCCTTCCTATATTCAGGTCAAGCGGGGCGAAATGATCG
TCCGGGTCGGCGAGCGGATAACCGAAGACCAGGCCCAGAAGCTCGAGATGCTCTTCGCGGCCCGCCACGGCATTCACCAC
CTTTTCACCGCCATCGGCATCATGGGGCTTGTGCTGGTCCTCTTCTATTTCCCCTACCGCTTCGCGCGTAAGAACATCCG
CAAATTTAACCCGACCAGCAAGGACCTGCTGCTGATCGCCCTGATCACGGTGGGGCTTTTCTTTGTCTTCAAGATAGGCA
TGACCGTTTCCGCAGCCTTGGGGACACCGTTCCCCAGCATCGATACCCACGACTACTTCTATCTCTTCCCCTTTGCCGTG
GGGCCGATGATCATCCGGATCATCCTCAATTCCGAAGTGGCCATGGTCTATGCGGCCATCACGGCACCCCTTCTGGGGAT
CATGTTCAACAACAGTCTCTTCGTTGTGGTCTACGCCCTTCTGGGGGGAATCGTCGGGGCTCACGGCGTGCGCCACTGCA
AGGACCGTAGCCGGATCTATACCGCCGGCCTCAAGGTGAGCGTGGTGAACCTGGCCATGGCCTTCTCTTTCCAGGTCATG
GGCGACAGCTTCCTGACTACCCAGACGCTGTGGAGCGCCGCATTCGCCCTGGCCGGCGGGATCGTCTGTTCGGCAATCGT
CACCGGGGTGATCCCCCTGATTGAAACGGTTTTTCACTACGTGACCGACATCAAGCTGCTGGAGCTGTCCAACCTCAACT
CCCCCATTCTCCGGGAACTGATGGTCCGCGCTCCCGGGACCTACCACCATAGCGTCCTTGTGGGCAACCTGGTGGAGGCG
GCGGCGGAGGCCATCAACGCGAATCCGCTCCTGGCGCGAGTTGCCGCCTACTACCACGACATCGGCAAAATCAGCAAACC
CCAGTATTTCATCGAGAATGTCGGCGGTGGCGAGAATCGCCACGACAAGCTGTCACCCAACATGAGCGCCCTGATTCTCA
TTTCCCATGTGAAGGAGGGGGTGGAGCTGGCCCGCGAGCACCGGCTGGGTCGGCCGATCATCGACATTATCCGTCAATCC
CACGGGACTGCCCTTATCAGTTTTTTCTACGGCAAGGCAAAGAACGTGGCAACTGAGGGTCAGACGGTGAATGAGCGCGA
TTTCCGCTACCCCGGCCCAAAACCCCAGACCCGAGAGGCAGGGCTCGTGATGCTGGCAGACTGCGTGGAGGCGGCTTCCC
GGACCCTTGCCGATCCGACACCGGCCCGCATCCAGGGGCTGGTCCAGAAGATCATCAATAATATCTTCATCGACGGACAG
TTGGATGAGTGTGAACTGACCCTCAAAAACCTTCACGAGATCGCCAAGAGTTTCAACCAGATCCTTGCCGGCATCTATCA
CCACCGGATCGATTATCCGGAGCCGGCCTACAAGGAAAAGGACAAAACGCCCGGAGGAAAGAAGACCCTTGAAGGTAGCG
ATAACGAACAGACAAAAACGCCATCCGATCGGGACGAGACGCCTAAGAAAGGTGGCGGAGACGATCTTAGGCGCCTTGGG
ATATCCCGATAG

Upstream 100 bases:

>100_bases
CGATATAGTAATTACTTGGTCAAACCGGACAATCGCGGGGATGTGCCTGCGCCTCAATTGATGTCAAACCGCGGCAACGC
TGCACCAGACAAGTAATTCT

Downstream 100 bases:

>100_bases
CGAGTTGTCGGTGGTCATCACCGGCGATCTGGGCATCCGCCGGGTCAACCGCGACTACCTCGGCAAAGACCGCCCCACCA
ATGTCATCTCGTTTGCCATG

Product: HD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 803; Mature: 802

Protein sequence:

>803_residues
MPSQSGNNDRDIRGSLSLSLGRLVDNLFERFSSPRHENRNRRILLVATAIILTFVIFPRQEFMSVRHEAGDIASTDIRAT
RDHLLEDRALTERKRKEAENAVPFVYSFDQQAAAELVKRFEQALVVLREAATHQQDAEQASVDEALSDIFGFAPSRAEIA
ALMRLGSSSELIEQVSQLADHLYSHKIIADKGRFAADSAHGITLVDSRSGEPLGKMEYAVAPLSVEEAGAALKEVRIAAG
GVSQRETESLKGLVAKAVKPNLSFNDDLTIRNRMQARESVRPSYIQVKRGEMIVRVGERITEDQAQKLEMLFAARHGIHH
LFTAIGIMGLVLVLFYFPYRFARKNIRKFNPTSKDLLLIALITVGLFFVFKIGMTVSAALGTPFPSIDTHDYFYLFPFAV
GPMIIRIILNSEVAMVYAAITAPLLGIMFNNSLFVVVYALLGGIVGAHGVRHCKDRSRIYTAGLKVSVVNLAMAFSFQVM
GDSFLTTQTLWSAAFALAGGIVCSAIVTGVIPLIETVFHYVTDIKLLELSNLNSPILRELMVRAPGTYHHSVLVGNLVEA
AAEAINANPLLARVAAYYHDIGKISKPQYFIENVGGGENRHDKLSPNMSALILISHVKEGVELAREHRLGRPIIDIIRQS
HGTALISFFYGKAKNVATEGQTVNERDFRYPGPKPQTREAGLVMLADCVEAASRTLADPTPARIQGLVQKIINNIFIDGQ
LDECELTLKNLHEIAKSFNQILAGIYHHRIDYPEPAYKEKDKTPGGKKTLEGSDNEQTKTPSDRDETPKKGGGDDLRRLG
ISR

Sequences:

>Translated_803_residues
MPSQSGNNDRDIRGSLSLSLGRLVDNLFERFSSPRHENRNRRILLVATAIILTFVIFPRQEFMSVRHEAGDIASTDIRAT
RDHLLEDRALTERKRKEAENAVPFVYSFDQQAAAELVKRFEQALVVLREAATHQQDAEQASVDEALSDIFGFAPSRAEIA
ALMRLGSSSELIEQVSQLADHLYSHKIIADKGRFAADSAHGITLVDSRSGEPLGKMEYAVAPLSVEEAGAALKEVRIAAG
GVSQRETESLKGLVAKAVKPNLSFNDDLTIRNRMQARESVRPSYIQVKRGEMIVRVGERITEDQAQKLEMLFAARHGIHH
LFTAIGIMGLVLVLFYFPYRFARKNIRKFNPTSKDLLLIALITVGLFFVFKIGMTVSAALGTPFPSIDTHDYFYLFPFAV
GPMIIRIILNSEVAMVYAAITAPLLGIMFNNSLFVVVYALLGGIVGAHGVRHCKDRSRIYTAGLKVSVVNLAMAFSFQVM
GDSFLTTQTLWSAAFALAGGIVCSAIVTGVIPLIETVFHYVTDIKLLELSNLNSPILRELMVRAPGTYHHSVLVGNLVEA
AAEAINANPLLARVAAYYHDIGKISKPQYFIENVGGGENRHDKLSPNMSALILISHVKEGVELAREHRLGRPIIDIIRQS
HGTALISFFYGKAKNVATEGQTVNERDFRYPGPKPQTREAGLVMLADCVEAASRTLADPTPARIQGLVQKIINNIFIDGQ
LDECELTLKNLHEIAKSFNQILAGIYHHRIDYPEPAYKEKDKTPGGKKTLEGSDNEQTKTPSDRDETPKKGGGDDLRRLG
ISR
>Mature_802_residues
PSQSGNNDRDIRGSLSLSLGRLVDNLFERFSSPRHENRNRRILLVATAIILTFVIFPRQEFMSVRHEAGDIASTDIRATR
DHLLEDRALTERKRKEAENAVPFVYSFDQQAAAELVKRFEQALVVLREAATHQQDAEQASVDEALSDIFGFAPSRAEIAA
LMRLGSSSELIEQVSQLADHLYSHKIIADKGRFAADSAHGITLVDSRSGEPLGKMEYAVAPLSVEEAGAALKEVRIAAGG
VSQRETESLKGLVAKAVKPNLSFNDDLTIRNRMQARESVRPSYIQVKRGEMIVRVGERITEDQAQKLEMLFAARHGIHHL
FTAIGIMGLVLVLFYFPYRFARKNIRKFNPTSKDLLLIALITVGLFFVFKIGMTVSAALGTPFPSIDTHDYFYLFPFAVG
PMIIRIILNSEVAMVYAAITAPLLGIMFNNSLFVVVYALLGGIVGAHGVRHCKDRSRIYTAGLKVSVVNLAMAFSFQVMG
DSFLTTQTLWSAAFALAGGIVCSAIVTGVIPLIETVFHYVTDIKLLELSNLNSPILRELMVRAPGTYHHSVLVGNLVEAA
AEAINANPLLARVAAYYHDIGKISKPQYFIENVGGGENRHDKLSPNMSALILISHVKEGVELAREHRLGRPIIDIIRQSH
GTALISFFYGKAKNVATEGQTVNERDFRYPGPKPQTREAGLVMLADCVEAASRTLADPTPARIQGLVQKIINNIFIDGQL
DECELTLKNLHEIAKSFNQILAGIYHHRIDYPEPAYKEKDKTPGGKKTLEGSDNEQTKTPSDRDETPKKGGGDDLRRLGI
SR

Specific function: Unknown

COG id: COG1480

COG function: function code R; Predicted membrane-associated HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011624
- InterPro:   IPR011621
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]

EC number: NA

Molecular weight: Translated: 88692; Mature: 88561

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSQSGNNDRDIRGSLSLSLGRLVDNLFERFSSPRHENRNRRILLVATAIILTFVIFPRQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHCCHH
EFMSVRHEAGDIASTDIRATRDHLLEDRALTERKRKEAENAVPFVYSFDQQAAAELVKRF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH
EQALVVLREAATHQQDAEQASVDEALSDIFGFAPSRAEIAALMRLGSSSELIEQVSQLAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
HLYSHKIIADKGRFAADSAHGITLVDSRSGEPLGKMEYAVAPLSVEEAGAALKEVRIAAG
HHHHCCCEECCCCCCCCCCCCEEEEECCCCCCCCCHHHEECCCCHHHHHHHHHHHHHHCC
GVSQRETESLKGLVAKAVKPNLSFNDDLTIRNRMQARESVRPSYIQVKRGEMIVRVGERI
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
TEDQAQKLEMLFAARHGIHHLFTAIGIMGLVLVLFYFPYRFARKNIRKFNPTSKDLLLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LITVGLFFVFKIGMTVSAALGTPFPSIDTHDYFYLFPFAVGPMIIRIILNSEVAMVYAAI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHH
TAPLLGIMFNNSLFVVVYALLGGIVGAHGVRHCKDRSRIYTAGLKVSVVNLAMAFSFQVM
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHH
GDSFLTTQTLWSAAFALAGGIVCSAIVTGVIPLIETVFHYVTDIKLLELSNLNSPILREL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHH
MVRAPGTYHHSVLVGNLVEAAAEAINANPLLARVAAYYHDIGKISKPQYFIENVGGGENR
HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC
HDKLSPNMSALILISHVKEGVELAREHRLGRPIIDIIRQSHGTALISFFYGKAKNVATEG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHCCCCCCC
QTVNERDFRYPGPKPQTREAGLVMLADCVEAASRTLADPTPARIQGLVQKIINNIFIDGQ
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCC
LDECELTLKNLHEIAKSFNQILAGIYHHRIDYPEPAYKEKDKTPGGKKTLEGSDNEQTKT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSDRDETPKKGGGDDLRRLGISR
CCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
PSQSGNNDRDIRGSLSLSLGRLVDNLFERFSSPRHENRNRRILLVATAIILTFVIFPRQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHCCHH
EFMSVRHEAGDIASTDIRATRDHLLEDRALTERKRKEAENAVPFVYSFDQQAAAELVKRF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH
EQALVVLREAATHQQDAEQASVDEALSDIFGFAPSRAEIAALMRLGSSSELIEQVSQLAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
HLYSHKIIADKGRFAADSAHGITLVDSRSGEPLGKMEYAVAPLSVEEAGAALKEVRIAAG
HHHHCCCEECCCCCCCCCCCCEEEEECCCCCCCCCHHHEECCCCHHHHHHHHHHHHHHCC
GVSQRETESLKGLVAKAVKPNLSFNDDLTIRNRMQARESVRPSYIQVKRGEMIVRVGERI
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
TEDQAQKLEMLFAARHGIHHLFTAIGIMGLVLVLFYFPYRFARKNIRKFNPTSKDLLLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LITVGLFFVFKIGMTVSAALGTPFPSIDTHDYFYLFPFAVGPMIIRIILNSEVAMVYAAI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHH
TAPLLGIMFNNSLFVVVYALLGGIVGAHGVRHCKDRSRIYTAGLKVSVVNLAMAFSFQVM
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHH
GDSFLTTQTLWSAAFALAGGIVCSAIVTGVIPLIETVFHYVTDIKLLELSNLNSPILREL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHH
MVRAPGTYHHSVLVGNLVEAAAEAINANPLLARVAAYYHDIGKISKPQYFIENVGGGENR
HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC
HDKLSPNMSALILISHVKEGVELAREHRLGRPIIDIIRQSHGTALISFFYGKAKNVATEG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHCCCCCCC
QTVNERDFRYPGPKPQTREAGLVMLADCVEAASRTLADPTPARIQGLVQKIINNIFIDGQ
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCC
LDECELTLKNLHEIAKSFNQILAGIYHHRIDYPEPAYKEKDKTPGGKKTLEGSDNEQTKT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSDRDETPKKGGGDDLRRLGISR
CCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]