| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997067
Identifier: 39997067
GI number: 39997067
Start: 2159701
End: 2161089
Strand: Reverse
Name: 39997067
Synonym: GSU1969
Alternate gene names: NA
Gene position: 2161089-2159701 (Counterclockwise)
Preceding gene: 39997068
Following gene: 39997066
Centisome position: 56.66
GC content: 62.49
Gene sequence:
>1389_bases ATGTCTGAAACCGTGTATGTCGTTCATTGCATCGATACCGAAGGTCCTTTGCACGAATCGACCGAGGCCACATTCGATCG TCTGAAATCGATCTTCAAGCTCGATCTGGAGCCGAGCACCGCCCTGCTGCGCCGTCTGCAGGCCGGCGAGGTGGACCTGG GAGGGATCGAGTCGGCGGTAATGAAGGTAGTGGACCCCCATCTCCTTGCCTACAACGATACCTGGGACAAGGTGGATGCC ATGCTGGCGGAATGCCTCTCGGACGAGTTCCGCATGCGGGTGCGCGACTCCTTCGGCGGCGGATGGGTCTACAACTGGTT CTGCGTTGATCATGTGGATTACGATTACAATCCTCGCCGGCGGGACATGGGATACCACAACGTCTTCGATCACTACCGGC ACCTGATGCGTGAAACGGGATCGATGCAGGACGGTCTCCACTTCCACTACCATCCGCACCCTTTCAACAGAGAGGCGCAT CGCTGCGCAACCCACTGGTGGGCCAATTCGGACAGCCTGCCCCAAATCCTGTCGCGACGGGTCATTGACCGGAACTGGTT CCCGTCTGCCCACCGGCCCGGGTTCCACGTGATCCGGCCGGACAGTCACTGGTTCCTGGAGCAGTTCATCCCCTTTGACT TTTCCAGCCAGGCCATGGTCCCGACCGATGACGACAGGGCCCAGTTCGGCCTCAAGGGGGGACGATTCGGCGACTGGCGC CGGTCGCCGGTGAATTGGCAGCCGTTCCATCCCGCGCCCGATGATTATCAGGTGCCCGGCTCCTGCCGCCGCTGGGTGGC GCGCTGCCTCAATGTGGGCACGCGGTTCAGGCTCATGACCGAAAACGATGTGCGCCAGGCCTTCCGTGAGGCCCGGGACG GCAAGCCCGTGGTGCTTTCATTCACCAATCATGATTTCCGCGATATGCGGCCGGACATCGAAGGCGTACTGCACCTGCTC GGCCGCGTGGCCGCCGAGTTCCCGGATGTCCCGTTCCGGTTCGCCGAGGCGCTGGAGGCCATGCGTGGCGCGCTCGGCCT GCCCCTGCCGCCGCCCTGCGAGCTTGACCTTACCCTGACCACCATCGGCGATTCGGCCCACGTGCTGGAGGTCAGCTCCG AAACGCCGACCTTTGGCCCGCAGCCCTGGCTTGCCCTTAAAACGGCGGCCGGAACGTACCACTATGACAACTTCGACATC GAGATACCTTTCCACCGCTGGCAGTATGTGTTCGACGAGGAAACGTTCCCCCTGAAAGCCCTGAGCGCCGTGGGGGTCGC CGCCAACAATGCCGCGGGCACTACGACCGTGGCCGTGATGGACACAGCGACCGGTACGGTTACCAGACGCCACTGGAATG GAACATCATCCGCCAGCCACCAGGAGTGA
Upstream 100 bases:
>100_bases AGATGACGTTATCCGCTGGGAGGATCTGGTGTGATGCGTCTACTGCGGCATGAGCAAGGGATGGGCGGCGCGCGCCGCGT GAATGTCAGAGGTGAGCTTG
Downstream 100 bases:
>100_bases GCCATGACCTCCGATATCAAAGCCATTCTCGAACAGGTCGTCATTTCTCCCGACGTCCCCATTGCCGAGGCCATCGCCCA GCTGGACAGGGCAGGTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MSETVYVVHCIDTEGPLHESTEATFDRLKSIFKLDLEPSTALLRRLQAGEVDLGGIESAVMKVVDPHLLAYNDTWDKVDA MLAECLSDEFRMRVRDSFGGGWVYNWFCVDHVDYDYNPRRRDMGYHNVFDHYRHLMRETGSMQDGLHFHYHPHPFNREAH RCATHWWANSDSLPQILSRRVIDRNWFPSAHRPGFHVIRPDSHWFLEQFIPFDFSSQAMVPTDDDRAQFGLKGGRFGDWR RSPVNWQPFHPAPDDYQVPGSCRRWVARCLNVGTRFRLMTENDVRQAFREARDGKPVVLSFTNHDFRDMRPDIEGVLHLL GRVAAEFPDVPFRFAEALEAMRGALGLPLPPPCELDLTLTTIGDSAHVLEVSSETPTFGPQPWLALKTAAGTYHYDNFDI EIPFHRWQYVFDEETFPLKALSAVGVAANNAAGTTTVAVMDTATGTVTRRHWNGTSSASHQE
Sequences:
>Translated_462_residues MSETVYVVHCIDTEGPLHESTEATFDRLKSIFKLDLEPSTALLRRLQAGEVDLGGIESAVMKVVDPHLLAYNDTWDKVDA MLAECLSDEFRMRVRDSFGGGWVYNWFCVDHVDYDYNPRRRDMGYHNVFDHYRHLMRETGSMQDGLHFHYHPHPFNREAH RCATHWWANSDSLPQILSRRVIDRNWFPSAHRPGFHVIRPDSHWFLEQFIPFDFSSQAMVPTDDDRAQFGLKGGRFGDWR RSPVNWQPFHPAPDDYQVPGSCRRWVARCLNVGTRFRLMTENDVRQAFREARDGKPVVLSFTNHDFRDMRPDIEGVLHLL GRVAAEFPDVPFRFAEALEAMRGALGLPLPPPCELDLTLTTIGDSAHVLEVSSETPTFGPQPWLALKTAAGTYHYDNFDI EIPFHRWQYVFDEETFPLKALSAVGVAANNAAGTTTVAVMDTATGTVTRRHWNGTSSASHQE >Mature_461_residues SETVYVVHCIDTEGPLHESTEATFDRLKSIFKLDLEPSTALLRRLQAGEVDLGGIESAVMKVVDPHLLAYNDTWDKVDAM LAECLSDEFRMRVRDSFGGGWVYNWFCVDHVDYDYNPRRRDMGYHNVFDHYRHLMRETGSMQDGLHFHYHPHPFNREAHR CATHWWANSDSLPQILSRRVIDRNWFPSAHRPGFHVIRPDSHWFLEQFIPFDFSSQAMVPTDDDRAQFGLKGGRFGDWRR SPVNWQPFHPAPDDYQVPGSCRRWVARCLNVGTRFRLMTENDVRQAFREARDGKPVVLSFTNHDFRDMRPDIEGVLHLLG RVAAEFPDVPFRFAEALEAMRGALGLPLPPPCELDLTLTTIGDSAHVLEVSSETPTFGPQPWLALKTAAGTYHYDNFDIE IPFHRWQYVFDEETFPLKALSAVGVAANNAAGTTTVAVMDTATGTVTRRHWNGTSSASHQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52888; Mature: 52757
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETVYVVHCIDTEGPLHESTEATFDRLKSIFKLDLEPSTALLRRLQAGEVDLGGIESAV CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCHHHHHH MKVVDPHLLAYNDTWDKVDAMLAECLSDEFRMRVRDSFGGGWVYNWFCVDHVDYDYNPRR HHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCH RDMGYHNVFDHYRHLMRETGSMQDGLHFHYHPHPFNREAHRCATHWWANSDSLPQILSRR HCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHH VIDRNWFPSAHRPGFHVIRPDSHWFLEQFIPFDFSSQAMVPTDDDRAQFGLKGGRFGDWR HHCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC RSPVNWQPFHPAPDDYQVPGSCRRWVARCLNVGTRFRLMTENDVRQAFREARDGKPVVLS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCEEEEE FTNHDFRDMRPDIEGVLHLLGRVAAEFPDVPFRFAEALEAMRGALGLPLPPPCELDLTLT ECCCCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE TIGDSAHVLEVSSETPTFGPQPWLALKTAAGTYHYDNFDIEIPFHRWQYVFDEETFPLKA EECCCEEEEEECCCCCCCCCCCCEEEEECCCEEEECCEEEEECHHHEEEEECCCCCCHHH LSAVGVAANNAAGTTTVAVMDTATGTVTRRHWNGTSSASHQE HHHHCEECCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure SETVYVVHCIDTEGPLHESTEATFDRLKSIFKLDLEPSTALLRRLQAGEVDLGGIESAV CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCHHHHHH MKVVDPHLLAYNDTWDKVDAMLAECLSDEFRMRVRDSFGGGWVYNWFCVDHVDYDYNPRR HHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCH RDMGYHNVFDHYRHLMRETGSMQDGLHFHYHPHPFNREAHRCATHWWANSDSLPQILSRR HCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHH VIDRNWFPSAHRPGFHVIRPDSHWFLEQFIPFDFSSQAMVPTDDDRAQFGLKGGRFGDWR HHCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC RSPVNWQPFHPAPDDYQVPGSCRRWVARCLNVGTRFRLMTENDVRQAFREARDGKPVVLS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCEEEEE FTNHDFRDMRPDIEGVLHLLGRVAAEFPDVPFRFAEALEAMRGALGLPLPPPCELDLTLT ECCCCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE TIGDSAHVLEVSSETPTFGPQPWLALKTAAGTYHYDNFDIEIPFHRWQYVFDEETFPLKA EECCCEEEEEECCCCCCCCCCCCEEEEECCCEEEECCEEEEECHHHEEEEECCCCCCHHH LSAVGVAANNAAGTTTVAVMDTATGTVTRRHWNGTSSASHQE HHHHCEECCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA