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The map label for this gene is 39997068

Identifier: 39997068

GI number: 39997068

Start: 2161156

End: 2162208

Strand: Reverse

Name: 39997068

Synonym: GSU1970

Alternate gene names: NA

Gene position: 2162208-2161156 (Counterclockwise)

Preceding gene: 39997069

Following gene: 39997067

Centisome position: 56.69

GC content: 59.54

Gene sequence:

>1053_bases
ATGAACAGCATGAAATTAGGAAATGTTCCGGTTGGAGCGGAGAATCCCCCCTATGTGATTGCCGAAATCGGTTCCAACCA
TAACGGAGACATGAACCTCTGCCGTCAACTGATCGATGCCGCGGCCGAGGCCGGCGCCCATGCCGTGAAGTTCCAGTCGT
GGACGGAAAACTCGCTCATCGCCCGGGAAGAATATGAGCGAAATACCGAGTATTCCGACAAAAAGCGTCACTTCGGTTCG
CTCAGGGATATGGTTAAGACCTATCAGCTCACGACAGACCAGCATAGGGAGGCCCATGCCTACTGCCGCGAACGGGGGAT
AGCCTTTTGCTCCACCCCCTTTTCGCCCGAAGAGGCCGATCTGCTGGAATCGCTGGATGTGCCCTTCTTTAAGATCGCAT
CTATGGATATCGTCCATCTGCCGTTTCTGAAGTACGTGGCGCGCAAGCGGCGGCCGATGCTGCTCTCGACCGGCATGGCG
ACCCTGGCGGAAATCGAGGCGGCCGTTGAAACCGTGCGTGCCGAAGGTAACGATCAGGTCGTGCTGCTGCACTGTGTATC
AATCTATCCGCCCGACTACGAGATGATCCATCTGCGCAACATGGCCACGCTCCAGCAGGCGTTTGATGTCCCGGTCGGGT
TCAGCGACCACACCATGGGCACGGCCATCCCCCTCGCGGCCATCGCCTTGGGAGCCTGCGTCATCGAGAAGCACTTCACC
CTCGACCAGGACATGGAGGGATGGGATCACGCCATCTCCGCCACGCCGACCGATTTGCGGACCATCGTGGAGGAGGGGAG
AAACATCCGGATAGCGCTCGGCGGCGGCAAGCGAATCGTCACCGAAGCCGAGATGGAAAAGCGCAAGAAATTCAGGCGGA
GCCTGGTGACGCGCCGCGCCCTTCCTCAGGGGCATGTGCTCGTGGAAGCGGATCTGGACGCCAAGCGTCCCGGTACCGGC
ATTTCTCCCGCCGAGATGACCTATGCCCTTGGCCGCAGACTGGCCCGGGACATGCAGGAAGATGACGTTATCCGCTGGGA
GGATCTGGTGTGA

Upstream 100 bases:

>100_bases
ACGTACGTGCCCTGAACGAGCTGGATCCGGCACCGCTCTGGTGGTCAACCGTTGCCTATCCCGCGTTGCAGAACATGTGG
ACGCATGAAAAGGAGACAGA

Downstream 100 bases:

>100_bases
TGCGTCTACTGCGGCATGAGCAAGGGATGGGCGGCGCGCGCCGCGTGAATGTCAGAGGTGAGCTTGATGTCTGAAACCGT
GTATGTCGTTCATTGCATCG

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNSMKLGNVPVGAENPPYVIAEIGSNHNGDMNLCRQLIDAAAEAGAHAVKFQSWTENSLIAREEYERNTEYSDKKRHFGS
LRDMVKTYQLTTDQHREAHAYCRERGIAFCSTPFSPEEADLLESLDVPFFKIASMDIVHLPFLKYVARKRRPMLLSTGMA
TLAEIEAAVETVRAEGNDQVVLLHCVSIYPPDYEMIHLRNMATLQQAFDVPVGFSDHTMGTAIPLAAIALGACVIEKHFT
LDQDMEGWDHAISATPTDLRTIVEEGRNIRIALGGGKRIVTEAEMEKRKKFRRSLVTRRALPQGHVLVEADLDAKRPGTG
ISPAEMTYALGRRLARDMQEDDVIRWEDLV

Sequences:

>Translated_350_residues
MNSMKLGNVPVGAENPPYVIAEIGSNHNGDMNLCRQLIDAAAEAGAHAVKFQSWTENSLIAREEYERNTEYSDKKRHFGS
LRDMVKTYQLTTDQHREAHAYCRERGIAFCSTPFSPEEADLLESLDVPFFKIASMDIVHLPFLKYVARKRRPMLLSTGMA
TLAEIEAAVETVRAEGNDQVVLLHCVSIYPPDYEMIHLRNMATLQQAFDVPVGFSDHTMGTAIPLAAIALGACVIEKHFT
LDQDMEGWDHAISATPTDLRTIVEEGRNIRIALGGGKRIVTEAEMEKRKKFRRSLVTRRALPQGHVLVEADLDAKRPGTG
ISPAEMTYALGRRLARDMQEDDVIRWEDLV
>Mature_350_residues
MNSMKLGNVPVGAENPPYVIAEIGSNHNGDMNLCRQLIDAAAEAGAHAVKFQSWTENSLIAREEYERNTEYSDKKRHFGS
LRDMVKTYQLTTDQHREAHAYCRERGIAFCSTPFSPEEADLLESLDVPFFKIASMDIVHLPFLKYVARKRRPMLLSTGMA
TLAEIEAAVETVRAEGNDQVVLLHCVSIYPPDYEMIHLRNMATLQQAFDVPVGFSDHTMGTAIPLAAIALGACVIEKHFT
LDQDMEGWDHAISATPTDLRTIVEEGRNIRIALGGGKRIVTEAEMEKRKKFRRSLVTRRALPQGHVLVEADLDAKRPGTG
ISPAEMTYALGRRLARDMQEDDVIRWEDLV

Specific function: Unknown

COG id: COG2089

COG function: function code M; Sialic acid synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spsE [H]

Homologues:

Organism=Homo sapiens, GI12056473, Length=343, Percent_Identity=34.1107871720117, Blast_Score=202, Evalue=5e-52,
Organism=Drosophila melanogaster, GI21357081, Length=358, Percent_Identity=30.1675977653631, Blast_Score=180, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006190
- InterPro:   IPR013785
- InterPro:   IPR013132
- InterPro:   IPR013974 [H]

Pfam domain/function: PF03102 NeuB; PF08666 SAF [H]

EC number: NA

Molecular weight: Translated: 39222; Mature: 39222

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50844 AFP_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSMKLGNVPVGAENPPYVIAEIGSNHNGDMNLCRQLIDAAAEAGAHAVKFQSWTENSLI
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCH
AREEYERNTEYSDKKRHFGSLRDMVKTYQLTTDQHREAHAYCRERGIAFCSTPFSPEEAD
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCCHHH
LLESLDVPFFKIASMDIVHLPFLKYVARKRRPMLLSTGMATLAEIEAAVETVRAEGNDQV
HHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCE
VLLHCVSIYPPDYEMIHLRNMATLQQAFDVPVGFSDHTMGTAIPLAAIALGACVIEKHFT
EEEEEEECCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
LDQDMEGWDHAISATPTDLRTIVEEGRNIRIALGGGKRIVTEAEMEKRKKFRRSLVTRRA
CCCCCCCHHHHCCCCCHHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHC
LPQGHVLVEADLDAKRPGTGISPAEMTYALGRRLARDMQEDDVIRWEDLV
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCC
>Mature Secondary Structure
MNSMKLGNVPVGAENPPYVIAEIGSNHNGDMNLCRQLIDAAAEAGAHAVKFQSWTENSLI
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCH
AREEYERNTEYSDKKRHFGSLRDMVKTYQLTTDQHREAHAYCRERGIAFCSTPFSPEEAD
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCCHHH
LLESLDVPFFKIASMDIVHLPFLKYVARKRRPMLLSTGMATLAEIEAAVETVRAEGNDQV
HHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCE
VLLHCVSIYPPDYEMIHLRNMATLQQAFDVPVGFSDHTMGTAIPLAAIALGACVIEKHFT
EEEEEEECCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
LDQDMEGWDHAISATPTDLRTIVEEGRNIRIALGGGKRIVTEAEMEKRKKFRRSLVTRRA
CCCCCCCHHHHCCCCCHHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHC
LPQGHVLVEADLDAKRPGTGISPAEMTYALGRRLARDMQEDDVIRWEDLV
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]