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The map label for this gene is ctpA-2 [H]

Identifier: 39996871

GI number: 39996871

Start: 1935660

End: 1936991

Strand: Reverse

Name: ctpA-2 [H]

Synonym: GSU1772

Alternate gene names: 39996871

Gene position: 1936991-1935660 (Counterclockwise)

Preceding gene: 39996872

Following gene: 39996870

Centisome position: 50.78

GC content: 53.15

Gene sequence:

>1332_bases
ATGTTCAAGACCATCAAAGGTAAACGCGTCGCACTGTTGCTTGCCTCGCTTTGTGTTGTTGCCGTGCTCGGTGCCGGTGC
CGTTCAGAAGCGGTGCGCAGCTGAGGGAGGGAACGATTACGAGTCCATCGAGCTCTTCACTGATGTGTTGGCGATCGTCA
AGAAAAGCTATGTTGAAGAGGTGGACACCAAGAAGCTCATCTACGGAGCCATCAACGGTATGCTTGCTTCACTTGATCCA
CACAGCTCCTTCATGCCTCCCGACATGTACAAGGAGATGAAGATCGATACGAAGGGGTCTTTCGGCGGCCTGGGTATCGA
GATTACGATCAAGGATGGACTCCTCACGGTAATATCCCCCATAGAGGACACTCCTGCCTTCAAGGCCGGCATCAAGGCGG
GAGATCAAATCTTGAAAATCGAAGACCGCTTTACCAAGGACATGACCATCATGGATGCGGTCAAGAGAATGCGGGGCCCC
AAGGGGACGAAAGTAACCCTTACCATTATGCGTGAAGGTTTCGACAAACCGAAGGAATTTACGCTCGTTCGCGATACCAT
TCAGGTCAAGAGCGTGCGGTTCAAATCGATGGATCAGGGGTATGGTTACATAAGAATCGCACAGTTCCAGGAAAAGACGG
ACGATGACCTGGTCAAGGCGCTCAAGGCACTCAAGGAAGAGAATGGCGGAGATTTGAGGGGACTCGTCCTCGACCTCCGT
AACGATCCGGGCGGACTTCTCGATCAGGCTGTCAAGGTTGCCGATCACTTTGTCGAAGATGGACTCATTGTGTACACGGA
GGGGCGTGAGAAGGAGTCGCGGATGCAGTTTACCGCCCGCAAGTCCGGCACTGAACCCAACTACCCGATGGTTGTGCTGA
TCAACAGCGGAAGCGCCAGTGCTTCTGAAATTGTCGCTGGTGCGCTGCAGGATCATAAGCGTGCCGTTGTCATGGGGACC
CAGAGTTTCGGGAAAGGCTCGGTCCAGACAATCATCCCCCTCTCCGATGAGTCTGGTCTCCGACTCACCACGGCACGGTA
TTTCACGCCGAGCGGTCGTTCCATCCAAGCCAAGGGCATAACGCCGGACATCGTTGTGGAGCGCGCGGAAATCCAGTCTA
CAGAGAAGATGGAAGGCCATATCCGCGAGAAAGACCTTGAGAATCATTTCGATTCCGACTCGAAGGACGGATCGGACAAC
AAACAAAAAGGAACAGATAAAGGTGCTTCGGCAGCATCCAAGGTCGATGAGCAGTTGAAGAGCGATTATCAGGTGATGCG
CGCGCTGGATCTCCTGAAAGGGTGGGAAATCCTGAAAACAATAAGCAAATGA

Upstream 100 bases:

>100_bases
CTCGCGGCCCGATGTTGTACTTCGAGATTCGGTATCAGGGACGGCCGGTTGATCCGTCTCCATGGTTCAGGTAGTCTGTT
TCTCAACTCTGGGAGGAGTA

Downstream 100 bases:

>100_bases
GAGGATGACTTACGCCAAAAGGGGGGGCTCGGGCCCCCCCTTTTTTTATGTAAATCCGATAAGTTCTATATTTGTATTGA
CACTCCCGTAACGATGTAGT

Product: carboxy-terminal processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MFKTIKGKRVALLLASLCVVAVLGAGAVQKRCAAEGGNDYESIELFTDVLAIVKKSYVEEVDTKKLIYGAINGMLASLDP
HSSFMPPDMYKEMKIDTKGSFGGLGIEITIKDGLLTVISPIEDTPAFKAGIKAGDQILKIEDRFTKDMTIMDAVKRMRGP
KGTKVTLTIMREGFDKPKEFTLVRDTIQVKSVRFKSMDQGYGYIRIAQFQEKTDDDLVKALKALKEENGGDLRGLVLDLR
NDPGGLLDQAVKVADHFVEDGLIVYTEGREKESRMQFTARKSGTEPNYPMVVLINSGSASASEIVAGALQDHKRAVVMGT
QSFGKGSVQTIIPLSDESGLRLTTARYFTPSGRSIQAKGITPDIVVERAEIQSTEKMEGHIREKDLENHFDSDSKDGSDN
KQKGTDKGASAASKVDEQLKSDYQVMRALDLLKGWEILKTISK

Sequences:

>Translated_443_residues
MFKTIKGKRVALLLASLCVVAVLGAGAVQKRCAAEGGNDYESIELFTDVLAIVKKSYVEEVDTKKLIYGAINGMLASLDP
HSSFMPPDMYKEMKIDTKGSFGGLGIEITIKDGLLTVISPIEDTPAFKAGIKAGDQILKIEDRFTKDMTIMDAVKRMRGP
KGTKVTLTIMREGFDKPKEFTLVRDTIQVKSVRFKSMDQGYGYIRIAQFQEKTDDDLVKALKALKEENGGDLRGLVLDLR
NDPGGLLDQAVKVADHFVEDGLIVYTEGREKESRMQFTARKSGTEPNYPMVVLINSGSASASEIVAGALQDHKRAVVMGT
QSFGKGSVQTIIPLSDESGLRLTTARYFTPSGRSIQAKGITPDIVVERAEIQSTEKMEGHIREKDLENHFDSDSKDGSDN
KQKGTDKGASAASKVDEQLKSDYQVMRALDLLKGWEILKTISK
>Mature_443_residues
MFKTIKGKRVALLLASLCVVAVLGAGAVQKRCAAEGGNDYESIELFTDVLAIVKKSYVEEVDTKKLIYGAINGMLASLDP
HSSFMPPDMYKEMKIDTKGSFGGLGIEITIKDGLLTVISPIEDTPAFKAGIKAGDQILKIEDRFTKDMTIMDAVKRMRGP
KGTKVTLTIMREGFDKPKEFTLVRDTIQVKSVRFKSMDQGYGYIRIAQFQEKTDDDLVKALKALKEENGGDLRGLVLDLR
NDPGGLLDQAVKVADHFVEDGLIVYTEGREKESRMQFTARKSGTEPNYPMVVLINSGSASASEIVAGALQDHKRAVVMGT
QSFGKGSVQTIIPLSDESGLRLTTARYFTPSGRSIQAKGITPDIVVERAEIQSTEKMEGHIREKDLENHFDSDSKDGSDN
KQKGTDKGASAASKVDEQLKSDYQVMRALDLLKGWEILKTISK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=339, Percent_Identity=29.2035398230088, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 48603; Mature: 48603

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKTIKGKRVALLLASLCVVAVLGAGAVQKRCAAEGGNDYESIELFTDVLAIVKKSYVEE
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VDTKKLIYGAINGMLASLDPHSSFMPPDMYKEMKIDTKGSFGGLGIEITIKDGLLTVISP
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECC
IEDTPAFKAGIKAGDQILKIEDRFTKDMTIMDAVKRMRGPKGTKVTLTIMREGFDKPKEF
CCCCCHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHE
TLVRDTIQVKSVRFKSMDQGYGYIRIAQFQEKTDDDLVKALKALKEENGGDLRGLVLDLR
EEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEC
NDPGGLLDQAVKVADHFVEDGLIVYTEGREKESRMQFTARKSGTEPNYPMVVLINSGSAS
CCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
ASEIVAGALQDHKRAVVMGTQSFGKGSVQTIIPLSDESGLRLTTARYFTPSGRSIQAKGI
HHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEECCC
TPDIVVERAEIQSTEKMEGHIREKDLENHFDSDSKDGSDNKQKGTDKGASAASKVDEQLK
CHHHEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
SDYQVMRALDLLKGWEILKTISK
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFKTIKGKRVALLLASLCVVAVLGAGAVQKRCAAEGGNDYESIELFTDVLAIVKKSYVEE
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VDTKKLIYGAINGMLASLDPHSSFMPPDMYKEMKIDTKGSFGGLGIEITIKDGLLTVISP
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECC
IEDTPAFKAGIKAGDQILKIEDRFTKDMTIMDAVKRMRGPKGTKVTLTIMREGFDKPKEF
CCCCCHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHE
TLVRDTIQVKSVRFKSMDQGYGYIRIAQFQEKTDDDLVKALKALKEENGGDLRGLVLDLR
EEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEC
NDPGGLLDQAVKVADHFVEDGLIVYTEGREKESRMQFTARKSGTEPNYPMVVLINSGSAS
CCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
ASEIVAGALQDHKRAVVMGTQSFGKGSVQTIIPLSDESGLRLTTARYFTPSGRSIQAKGI
HHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEECCC
TPDIVVERAEIQSTEKMEGHIREKDLENHFDSDSKDGSDNKQKGTDKGASAASKVDEQLK
CHHHEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
SDYQVMRALDLLKGWEILKTISK
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]