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The map label for this gene is 39996870

Identifier: 39996870

GI number: 39996870

Start: 1934867

End: 1935514

Strand: Reverse

Name: 39996870

Synonym: GSU1771

Alternate gene names: NA

Gene position: 1935514-1934867 (Counterclockwise)

Preceding gene: 39996871

Following gene: 39996869

Centisome position: 50.75

GC content: 48.15

Gene sequence:

>648_bases
ATGGTTGCACATAGAAAAATAACGACGACAGATGAGAGGGGAGAAGAGGGGCCTGCTTTACATATCAACTCGTTTGGCGG
TCTTTCCATTTCTTACCACGGCGCTCCCATAAGCATTGTCTGGGAAAGCCAGAAAGCCAGGATACTTTTCTGTTATCTCC
TTATCTCTTATGATCAGTGGCTGCACAGGGACAAACTGATTGAAATGATTTGGCCCGGATGTGATCTTTCCTCCGGTGCC
AAGAACTTCAAGACTACCCTGAGCAGGCTGCGCAAGTCATTTTCCGGTCCTCGCACCGTGAATCCCGTGTTGAGCTTGGG
AGAGGCCATTCGGCTCGATTACTCCGTTTTCTCGCTTGATTCCAGCCAGTTTAAATATCATGCCTCTTCAGGGATAAAAA
TGCTGGCCCGCGGCGAGATTTCCGTGGCAAGAAAGTATCTGGAAACTGCCCAGGATCTTTACAGTGGGCCCTTTTTGCCT
GAAGAACCATTTGATCCCTATATTACCGCGGAACGCAATGAACTGGAGAAACTTCACGCGTCCGTTCTGTCTTCACTTGA
AAAGGTATATCAAATTGAAGGGAATCAGGATGCCGTCGAGGCTATAACTCTCCTGAAGAATGTTGCGGGGATGGCTCATC
AATCTTGA

Upstream 100 bases:

>100_bases
TTATGTAAATCCGATAAGTTCTATATTTGTATTGACACTCCCGTAACGATGTAGTATTCAGTAGGTAAATTAATCACAGT
TAAGGTAAGGGTGTATCGCG

Downstream 100 bases:

>100_bases
TGAGCCGTCTCATGCAGTATATCTGTAAGTATTGACTGAATATTCAACACTCAACAGGTCTCGCCGACTCCGTTCCCCTC
GTCTCATTTTGCAACTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: SARP Family Transcriptional Regulator

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MVAHRKITTTDERGEEGPALHINSFGGLSISYHGAPISIVWESQKARILFCYLLISYDQWLHRDKLIEMIWPGCDLSSGA
KNFKTTLSRLRKSFSGPRTVNPVLSLGEAIRLDYSVFSLDSSQFKYHASSGIKMLARGEISVARKYLETAQDLYSGPFLP
EEPFDPYITAERNELEKLHASVLSSLEKVYQIEGNQDAVEAITLLKNVAGMAHQS

Sequences:

>Translated_215_residues
MVAHRKITTTDERGEEGPALHINSFGGLSISYHGAPISIVWESQKARILFCYLLISYDQWLHRDKLIEMIWPGCDLSSGA
KNFKTTLSRLRKSFSGPRTVNPVLSLGEAIRLDYSVFSLDSSQFKYHASSGIKMLARGEISVARKYLETAQDLYSGPFLP
EEPFDPYITAERNELEKLHASVLSSLEKVYQIEGNQDAVEAITLLKNVAGMAHQS
>Mature_215_residues
MVAHRKITTTDERGEEGPALHINSFGGLSISYHGAPISIVWESQKARILFCYLLISYDQWLHRDKLIEMIWPGCDLSSGA
KNFKTTLSRLRKSFSGPRTVNPVLSLGEAIRLDYSVFSLDSSQFKYHASSGIKMLARGEISVARKYLETAQDLYSGPFLP
EEPFDPYITAERNELEKLHASVLSSLEKVYQIEGNQDAVEAITLLKNVAGMAHQS

Specific function: Unknown

COG id: COG3947

COG function: function code T; Response regulator containing CheY-like receiver and SARP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24068; Mature: 24068

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAHRKITTTDERGEEGPALHINSFGGLSISYHGAPISIVWESQKARILFCYLLISYDQW
CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEEECCCCCEEHHHHHHHHHHHH
LHRDKLIEMIWPGCDLSSGAKNFKTTLSRLRKSFSGPRTVNPVLSLGEAIRLDYSVFSLD
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHEECHHEEECC
SSQFKYHASSGIKMLARGEISVARKYLETAQDLYSGPFLPEEPFDPYITAERNELEKLHA
CCHHEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHH
SVLSSLEKVYQIEGNQDAVEAITLLKNVAGMAHQS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVAHRKITTTDERGEEGPALHINSFGGLSISYHGAPISIVWESQKARILFCYLLISYDQW
CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEEECCCCCEEHHHHHHHHHHHH
LHRDKLIEMIWPGCDLSSGAKNFKTTLSRLRKSFSGPRTVNPVLSLGEAIRLDYSVFSLD
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHEECHHEEECC
SSQFKYHASSGIKMLARGEISVARKYLETAQDLYSGPFLPEEPFDPYITAERNELEKLHA
CCHHEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHH
SVLSSLEKVYQIEGNQDAVEAITLLKNVAGMAHQS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA