Click here to switch to the map view.

The map label for this gene is yibP [H]

Identifier: 39996872

GI number: 39996872

Start: 1937018

End: 1938193

Strand: Reverse

Name: yibP [H]

Synonym: GSU1773

Alternate gene names: 39996872

Gene position: 1938193-1937018 (Counterclockwise)

Preceding gene: 39996873

Following gene: 39996871

Centisome position: 50.82

GC content: 51.28

Gene sequence:

>1176_bases
ATGATGCGAAGTTTTTGGGTACCCATAGTATTTCTGACGATCTGCGTTTCCGTAGCGCTTGCCGCTGATGTGCACGATCA
ACTCAAGGGCGTGAAGAAGGAAATCAGCGAGAAAAAGCGCCTTCTTCGAAAAACCGCAAAGGTTGAAAAGCAGGTCACCG
GTGAATTGCTGGTGATCGATCAGAGCCTGAAGGAGAAGCAGACCCAGCTTGCGTCATTGAACAACGAACTCCATGGCGTC
GAACGGGATCTATCCAGCACGACCAACGAGATTGATCGTGTCAAGGGCGAAACCGAACGGAAGAAACAGGAGATTCAGAA
GCGGCTTGTTTCGGTGTATAAAGCTGGCGAGATCGGTAATCTTCGGGTCGTATTCTCCTCCGAATCATTTCCCCAAATGG
TTGAAAGCCTGCGTTACATGAGTGCTGTCATCGGGAACGATCGCCGCCTTTTCAACGAGTACTCGGACAAGATTGTTGAA
TTATCAAACCTCAAGCGAAAACTGGAAAATGAGGTGCAGCGAAAAGAACGGATCGTGGCCGGGATAGCGAACAAGAAACG
TGAAATCGAGGCCGAAAAAGACAAAAAAGCGGCCTATCTCACCAAGGTTAAGCAGGACAAGAAGGAATATCTCTCCTCTC
TCAGGGACCTCCAGGCCAATGCGCGCAGGTTGCAGTCCATGGTGGAAAAACTTGAAGCACAGAGTAGAAAGAGCTATACT
CAGTCACGCGAAAAGAAAGGACTTCCGCCAGGTCTCCCGCCTTTGCCTGACTCAGGATTCGGCTCCCAGCGGGGGAGGCT
ATCCCTGCCGACTTCCGGTGATATTGTTGGAAGATTCGGACGGCACAAGCATCCCGAGTTCAACTCTTATACAGTCAGCA
ACGGTATTTCCATCGCAGCACCGGCTGGTTCGGATATCAGGTCGGTCTATGAGGGCAAGGTCCTCTTTGCGGACTATTTC
AAAGGTTACGGCAATATGATCATTATTGATCATGGAGGTGGTTTTTTCAGCCTCTATGCCCACGCGTCACGCATCTCCAA
ACGGGTTGGCGCGCAGGTTAACCGCAATGAGGTGGTCGCCACTGTCGGCGATGTTGATTCACCTCGCGGCCCGATGTTGT
ACTTCGAGATTCGGTATCAGGGACGGCCGGTTGATCCGTCTCCATGGTTCAGGTAG

Upstream 100 bases:

>100_bases
TCCTGCCCCCGGTACATATTGCCGGTATTTTCATCGGCGGCATCGTGCTCGGGCTTCTTGGCAGTCTCACCTCGCTCAGG
CGTTTCAGCGACAATCAGTC

Downstream 100 bases:

>100_bases
TCTGTTTCTCAACTCTGGGAGGAGTAATGTTCAAGACCATCAAAGGTAAACGCGTCGCACTGTTGCTTGCCTCGCTTTGT
GTTGTTGCCGTGCTCGGTGC

Product: M23/M37 peptidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MMRSFWVPIVFLTICVSVALAADVHDQLKGVKKEISEKKRLLRKTAKVEKQVTGELLVIDQSLKEKQTQLASLNNELHGV
ERDLSSTTNEIDRVKGETERKKQEIQKRLVSVYKAGEIGNLRVVFSSESFPQMVESLRYMSAVIGNDRRLFNEYSDKIVE
LSNLKRKLENEVQRKERIVAGIANKKREIEAEKDKKAAYLTKVKQDKKEYLSSLRDLQANARRLQSMVEKLEAQSRKSYT
QSREKKGLPPGLPPLPDSGFGSQRGRLSLPTSGDIVGRFGRHKHPEFNSYTVSNGISIAAPAGSDIRSVYEGKVLFADYF
KGYGNMIIIDHGGGFFSLYAHASRISKRVGAQVNRNEVVATVGDVDSPRGPMLYFEIRYQGRPVDPSPWFR

Sequences:

>Translated_391_residues
MMRSFWVPIVFLTICVSVALAADVHDQLKGVKKEISEKKRLLRKTAKVEKQVTGELLVIDQSLKEKQTQLASLNNELHGV
ERDLSSTTNEIDRVKGETERKKQEIQKRLVSVYKAGEIGNLRVVFSSESFPQMVESLRYMSAVIGNDRRLFNEYSDKIVE
LSNLKRKLENEVQRKERIVAGIANKKREIEAEKDKKAAYLTKVKQDKKEYLSSLRDLQANARRLQSMVEKLEAQSRKSYT
QSREKKGLPPGLPPLPDSGFGSQRGRLSLPTSGDIVGRFGRHKHPEFNSYTVSNGISIAAPAGSDIRSVYEGKVLFADYF
KGYGNMIIIDHGGGFFSLYAHASRISKRVGAQVNRNEVVATVGDVDSPRGPMLYFEIRYQGRPVDPSPWFR
>Mature_391_residues
MMRSFWVPIVFLTICVSVALAADVHDQLKGVKKEISEKKRLLRKTAKVEKQVTGELLVIDQSLKEKQTQLASLNNELHGV
ERDLSSTTNEIDRVKGETERKKQEIQKRLVSVYKAGEIGNLRVVFSSESFPQMVESLRYMSAVIGNDRRLFNEYSDKIVE
LSNLKRKLENEVQRKERIVAGIANKKREIEAEKDKKAAYLTKVKQDKKEYLSSLRDLQANARRLQSMVEKLEAQSRKSYT
QSREKKGLPPGLPPLPDSGFGSQRGRLSLPTSGDIVGRFGRHKHPEFNSYTVSNGISIAAPAGSDIRSVYEGKVLFADYF
KGYGNMIIIDHGGGFFSLYAHASRISKRVGAQVNRNEVVATVGDVDSPRGPMLYFEIRYQGRPVDPSPWFR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=424, Percent_Identity=23.8207547169811, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1789099, Length=118, Percent_Identity=34.7457627118644, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87082174, Length=118, Percent_Identity=31.3559322033898, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 44196; Mature: 44196

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EECCCCCCCCCEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure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EECCCCCCCCCEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]