| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is maeB [H]
Identifier: 39996800
GI number: 39996800
Start: 1861362
End: 1863620
Strand: Reverse
Name: maeB [H]
Synonym: GSU1700
Alternate gene names: 39996800
Gene position: 1863620-1861362 (Counterclockwise)
Preceding gene: 39996810
Following gene: 39996799
Centisome position: 48.86
GC content: 57.64
Gene sequence:
>2259_bases ATGAGCAAAAAGCAGGACGCCCTTGATTATCACTCCACAGGACGAAAAGGGAAGATAGAGGTAATTCCGTCAAAACCATG TCTTACCCAGCGCGACCTCTCCCTTGCCTACTCACCCGGTGTAGCCGAACCTTGTCTTGAAATCGAAAAAAACCCTGAAG ACGCATATAAATATACTGCCAAGGGGAATCTGGTGGCGGTATTGTCCAACGGTACGGCCGTTCTCGGTCTCGGTGACATC GGCGCCTTGGCCGGCAAACCGGTCATGGAGGGCAAAGGGGTTCTCTTCAAGCGTTTTGCCGATATCGATGTCTTCGACAT CGAGGTTGACACCAAAAACGCTGACGAAATAATCAAGGTCTGCCAGTTGCTGGAACCGACCTTCGGCGGCATAAACCTTG AGGACATCAAGGCACCTGAATGCTTTTATATCGAGGAAAAGCTCAAGGAGACCATGAACATTCCGGTCTTCCACGACGAT CAGCATGGCACCGCCATCATTTCCGGCGCAGCCCTCATCAATGCCCTTGAACTGGTCGGCAAGAAGATCGAAGACATCAA GATCGTGGTCAACGGCGCCGGAGCCTCCGGCATCGCCTGCGCCCAGATGGCGGTTGAACTTGGTGCGAAAAAGGAGAACA TCATTCTCTGCGATACCAAGGGCGTCATCTTCAAGGGACGTAGCGCCGGCATGAACGAGTACAAGGAGCGCTTCGCCGTC GAAACCGAAGACCGCACCCTGGAAGATGCCTTCAAAAATGCCGATGTGGCCTACGGCCTCTCCAGCAAGGGGGCATTCAC CCCCGAAATGATCCGTGACATGGCGCCCAACCCGATCATCTTCGCCATGGCAAACCCCGATCCCGAAATCACCCCCGAGG AGGTGGCGGCGGTCCGGGCCGACGCCATCATGGCCACCGGCCGCTCCGACTATCCTAACCAGGTGAATAACGTTCTGGGC TTCCCCTTCATCTTCCGCGGCGCACTCGATGTGCGGGCCACGACCATCAATGAGACCATGAAAAAGGCGTGCGTCTTCGC TCTGGCCGAACTGGCCAAAGAGGACTGCCCGGACTCGGTGTGTCGTGCGTACGGCAATAAGAAATTCGCCTTCGGTCGCG AGTACATCATTCCTAAGCCCTTTGATCCCCGCGCGCTCCTGAGGGTGGCTCCTGCCGTTGCCAAGGCGGCCATGGAGTCG GGGGTCGCCCGCCAGCCCATTGCCGACATGGAAAAGTACATGGAGCATCTGGAGACGCTCCAGGGCAAGGCCAAGGAGAC TCTGCGCCTCATCATCAACAAGGCGAAGACCGATCCCAAGCGGGTCGTCTTGCCCGAGGGCGAGAATGAAAAGATCCTTC GGGCCGCACAAGTGATGATCGAAGAGGGGATCGCCTATCCGATCCTCCTGGGCAATCGGCAGGAAATCCGCAAAAAGATC GAAGAGCTCAACCTTGATCTTAATGGCGGCGTCACTATCATTGACCCAGACGACAGCCCCGACACTGAGCGTTACTCCCA AGCCCTGTTCGAGCAGCGGCAGCGGAAAGGGATCACCCTGACCGAGGCCCGCCGCATGATCCGGCGCCGGGGCCGCACTT ATTTCGGCTGCGAGATGGTCCGTTGCGGCGATGCCGATGCTCTGCTTTCTGGCATTGATGCCCATTATCCCGACATCATC CGCCCTGCCCTTGAAGTGATCGGCAAGCAGGAAGGCCTCTCCAGCGTCCACGGCCTTTACCTCATGGTTTTCAAGCGGGG CATTTTCCTGCTGGCCGACACCACGGTCTGCATCGAGCCTACCGCCGAGGAACTGGCCGAAACCGCCATACTGGCAGCCG AGAAGGCACGGCTTCTGGATCTCGACCCCCGTATCGCCATGCTTTCATTTTCCAACTTTGGTTCCGTCAACCACCCCCAG GCCCTCAAGGTCAAGCGGGCTGCGGAGATCGTCAAACAGCGGGCGCCGGAACTGATAATCGACGGCGAGATGCAGGCCGA CACCGCCGTTGTGCCTGACATTCTGGAGTCCCATTATCCCTTTGCCACACTCAAAGGCGGAGCAAACATCCTCATTTTCC CCGACCTGAACTCGGGCAACATCAGCTACAAGCTCCTTACCCGCCTTGGCGGAGCCGACGCCATCGGCCCGATTCTCATG GGAATGAAGAAGCCGGTGCACGTACTGCAGCGCGGCGATGACGTAATGGATATCGTCAACATGGCAGCCATTGCCGTTGT CGACGCGCAAAGCAACTGA
Upstream 100 bases:
>100_bases AAAAACGCTGGCGATAAAACCGTGTTGGGCTCGTCACAGCATATCAAAACAAATTTTAGCTTCACTAAAACGTGCGGGCC GCGAAAGGAGCGAACACCAC
Downstream 100 bases:
>100_bases AGCGCCAACATATGGAAATGACAAAGGGGGCCGTCGGCCCCCTTTTTTTGTCGCAAAATCCGATAGGTAAACAAGAAATC GGGTTGTCACGGCCTTGGGG
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 752; Mature: 751
Protein sequence:
>752_residues MSKKQDALDYHSTGRKGKIEVIPSKPCLTQRDLSLAYSPGVAEPCLEIEKNPEDAYKYTAKGNLVAVLSNGTAVLGLGDI GALAGKPVMEGKGVLFKRFADIDVFDIEVDTKNADEIIKVCQLLEPTFGGINLEDIKAPECFYIEEKLKETMNIPVFHDD QHGTAIISGAALINALELVGKKIEDIKIVVNGAGASGIACAQMAVELGAKKENIILCDTKGVIFKGRSAGMNEYKERFAV ETEDRTLEDAFKNADVAYGLSSKGAFTPEMIRDMAPNPIIFAMANPDPEITPEEVAAVRADAIMATGRSDYPNQVNNVLG FPFIFRGALDVRATTINETMKKACVFALAELAKEDCPDSVCRAYGNKKFAFGREYIIPKPFDPRALLRVAPAVAKAAMES GVARQPIADMEKYMEHLETLQGKAKETLRLIINKAKTDPKRVVLPEGENEKILRAAQVMIEEGIAYPILLGNRQEIRKKI EELNLDLNGGVTIIDPDDSPDTERYSQALFEQRQRKGITLTEARRMIRRRGRTYFGCEMVRCGDADALLSGIDAHYPDII RPALEVIGKQEGLSSVHGLYLMVFKRGIFLLADTTVCIEPTAEELAETAILAAEKARLLDLDPRIAMLSFSNFGSVNHPQ ALKVKRAAEIVKQRAPELIIDGEMQADTAVVPDILESHYPFATLKGGANILIFPDLNSGNISYKLLTRLGGADAIGPILM GMKKPVHVLQRGDDVMDIVNMAAIAVVDAQSN
Sequences:
>Translated_752_residues MSKKQDALDYHSTGRKGKIEVIPSKPCLTQRDLSLAYSPGVAEPCLEIEKNPEDAYKYTAKGNLVAVLSNGTAVLGLGDI GALAGKPVMEGKGVLFKRFADIDVFDIEVDTKNADEIIKVCQLLEPTFGGINLEDIKAPECFYIEEKLKETMNIPVFHDD QHGTAIISGAALINALELVGKKIEDIKIVVNGAGASGIACAQMAVELGAKKENIILCDTKGVIFKGRSAGMNEYKERFAV ETEDRTLEDAFKNADVAYGLSSKGAFTPEMIRDMAPNPIIFAMANPDPEITPEEVAAVRADAIMATGRSDYPNQVNNVLG FPFIFRGALDVRATTINETMKKACVFALAELAKEDCPDSVCRAYGNKKFAFGREYIIPKPFDPRALLRVAPAVAKAAMES GVARQPIADMEKYMEHLETLQGKAKETLRLIINKAKTDPKRVVLPEGENEKILRAAQVMIEEGIAYPILLGNRQEIRKKI EELNLDLNGGVTIIDPDDSPDTERYSQALFEQRQRKGITLTEARRMIRRRGRTYFGCEMVRCGDADALLSGIDAHYPDII RPALEVIGKQEGLSSVHGLYLMVFKRGIFLLADTTVCIEPTAEELAETAILAAEKARLLDLDPRIAMLSFSNFGSVNHPQ ALKVKRAAEIVKQRAPELIIDGEMQADTAVVPDILESHYPFATLKGGANILIFPDLNSGNISYKLLTRLGGADAIGPILM GMKKPVHVLQRGDDVMDIVNMAAIAVVDAQSN >Mature_751_residues SKKQDALDYHSTGRKGKIEVIPSKPCLTQRDLSLAYSPGVAEPCLEIEKNPEDAYKYTAKGNLVAVLSNGTAVLGLGDIG ALAGKPVMEGKGVLFKRFADIDVFDIEVDTKNADEIIKVCQLLEPTFGGINLEDIKAPECFYIEEKLKETMNIPVFHDDQ HGTAIISGAALINALELVGKKIEDIKIVVNGAGASGIACAQMAVELGAKKENIILCDTKGVIFKGRSAGMNEYKERFAVE TEDRTLEDAFKNADVAYGLSSKGAFTPEMIRDMAPNPIIFAMANPDPEITPEEVAAVRADAIMATGRSDYPNQVNNVLGF PFIFRGALDVRATTINETMKKACVFALAELAKEDCPDSVCRAYGNKKFAFGREYIIPKPFDPRALLRVAPAVAKAAMESG VARQPIADMEKYMEHLETLQGKAKETLRLIINKAKTDPKRVVLPEGENEKILRAAQVMIEEGIAYPILLGNRQEIRKKIE ELNLDLNGGVTIIDPDDSPDTERYSQALFEQRQRKGITLTEARRMIRRRGRTYFGCEMVRCGDADALLSGIDAHYPDIIR PALEVIGKQEGLSSVHGLYLMVFKRGIFLLADTTVCIEPTAEELAETAILAAEKARLLDLDPRIAMLSFSNFGSVNHPQA LKVKRAAEIVKQRAPELIIDGEMQADTAVVPDILESHYPFATLKGGANILIFPDLNSGNISYKLLTRLGGADAIGPILMG MKKPVHVLQRGDDVMDIVNMAAIAVVDAQSN
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=359, Percent_Identity=28.6908077994429, Blast_Score=84, Evalue=6e-16, Organism=Homo sapiens, GI62420882, Length=368, Percent_Identity=27.445652173913, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI62420880, Length=368, Percent_Identity=27.445652173913, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI239049447, Length=368, Percent_Identity=27.445652173913, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI4505145, Length=319, Percent_Identity=29.153605015674, Blast_Score=73, Evalue=9e-13, Organism=Homo sapiens, GI270265879, Length=320, Percent_Identity=29.0625, Blast_Score=73, Evalue=1e-12, Organism=Escherichia coli, GI1788806, Length=754, Percent_Identity=53.448275862069, Blast_Score=778, Evalue=0.0, Organism=Escherichia coli, GI1788800, Length=317, Percent_Identity=35.3312302839117, Blast_Score=204, Evalue=1e-53, Organism=Escherichia coli, GI1788635, Length=345, Percent_Identity=35.6521739130435, Blast_Score=202, Evalue=5e-53, Organism=Escherichia coli, GI87081919, Length=284, Percent_Identity=26.4084507042254, Blast_Score=74, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17537199, Length=416, Percent_Identity=23.7980769230769, Blast_Score=73, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6322823, Length=268, Percent_Identity=29.8507462686567, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI24646388, Length=400, Percent_Identity=27.25, Blast_Score=82, Evalue=2e-15, Organism=Drosophila melanogaster, GI24646386, Length=400, Percent_Identity=27.25, Blast_Score=82, Evalue=2e-15, Organism=Drosophila melanogaster, GI281362674, Length=408, Percent_Identity=24.7549019607843, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI21356279, Length=408, Percent_Identity=24.7549019607843, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI281362672, Length=408, Percent_Identity=24.7549019607843, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI78707242, Length=411, Percent_Identity=26.2773722627737, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI78707238, Length=411, Percent_Identity=26.2773722627737, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI78707240, Length=395, Percent_Identity=26.0759493670886, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 82151; Mature: 82020
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKQDALDYHSTGRKGKIEVIPSKPCLTQRDLSLAYSPGVAEPCLEIEKNPEDAYKYTA CCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHHHCCCCCHHHEEEEC KGNLVAVLSNGTAVLGLGDIGALAGKPVMEGKGVLFKRFADIDVFDIEVDTKNADEIIKV CCCEEEEEECCEEEEEECCHHHHCCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHH CQLLEPTFGGINLEDIKAPECFYIEEKLKETMNIPVFHDDQHGTAIISGAALINALELVG HHHHCCCCCCCCHHHCCCCCEEEHHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHHHHC KKIEDIKIVVNGAGASGIACAQMAVELGAKKENIILCDTKGVIFKGRSAGMNEYKERFAV CCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCHHHHHHHHCC ETEDRTLEDAFKNADVAYGLSSKGAFTPEMIRDMAPNPIIFAMANPDPEITPEEVAAVRA CCCCCHHHHHHCCCCEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHH DAIMATGRSDYPNQVNNVLGFPFIFRGALDVRATTINETMKKACVFALAELAKEDCPDSV HHHEECCCCCCCHHHHHHCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHH CRAYGNKKFAFGREYIIPKPFDPRALLRVAPAVAKAAMESGVARQPIADMEKYMEHLETL HHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QGKAKETLRLIINKAKTDPKRVVLPEGENEKILRAAQVMIEEGIAYPILLGNRQEIRKKI HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH EELNLDLNGGVTIIDPDDSPDTERYSQALFEQRQRKGITLTEARRMIRRRGRTYFGCEMV HHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECEEEE RCGDADALLSGIDAHYPDIIRPALEVIGKQEGLSSVHGLYLMVFKRGIFLLADTTVCIEP EECCHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCEEEECC TAEELAETAILAAEKARLLDLDPRIAMLSFSNFGSVNHPQALKVKRAAEIVKQRAPELII CHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEE DGEMQADTAVVPDILESHYPFATLKGGANILIFPDLNSGNISYKLLTRLGGADAIGPILM CCCCCCCCHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCEEEEHHHHCCCCHHHHHHHH GMKKPVHVLQRGDDVMDIVNMAAIAVVDAQSN CCCCHHHHHHCCCHHHHHHHHHHEEEEECCCC >Mature Secondary Structure SKKQDALDYHSTGRKGKIEVIPSKPCLTQRDLSLAYSPGVAEPCLEIEKNPEDAYKYTA CCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHHHCCCCCHHHEEEEC KGNLVAVLSNGTAVLGLGDIGALAGKPVMEGKGVLFKRFADIDVFDIEVDTKNADEIIKV CCCEEEEEECCEEEEEECCHHHHCCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHH CQLLEPTFGGINLEDIKAPECFYIEEKLKETMNIPVFHDDQHGTAIISGAALINALELVG HHHHCCCCCCCCHHHCCCCCEEEHHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHHHHC KKIEDIKIVVNGAGASGIACAQMAVELGAKKENIILCDTKGVIFKGRSAGMNEYKERFAV CCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCHHHHHHHHCC ETEDRTLEDAFKNADVAYGLSSKGAFTPEMIRDMAPNPIIFAMANPDPEITPEEVAAVRA CCCCCHHHHHHCCCCEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHH DAIMATGRSDYPNQVNNVLGFPFIFRGALDVRATTINETMKKACVFALAELAKEDCPDSV HHHEECCCCCCCHHHHHHCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHH CRAYGNKKFAFGREYIIPKPFDPRALLRVAPAVAKAAMESGVARQPIADMEKYMEHLETL HHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QGKAKETLRLIINKAKTDPKRVVLPEGENEKILRAAQVMIEEGIAYPILLGNRQEIRKKI HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH EELNLDLNGGVTIIDPDDSPDTERYSQALFEQRQRKGITLTEARRMIRRRGRTYFGCEMV HHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECEEEE RCGDADALLSGIDAHYPDIIRPALEVIGKQEGLSSVHGLYLMVFKRGIFLLADTTVCIEP EECCHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCEEEECC TAEELAETAILAAEKARLLDLDPRIAMLSFSNFGSVNHPQALKVKRAAEIVKQRAPELII CHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEE DGEMQADTAVVPDILESHYPFATLKGGANILIFPDLNSGNISYKLLTRLGGADAIGPILM CCCCCCCCHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCEEEEHHHHCCCCHHHHHHHH GMKKPVHVLQRGDDVMDIVNMAAIAVVDAQSN CCCCHHHHHHCCCHHHHHHHHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]