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The map label for this gene is 39996799

Identifier: 39996799

GI number: 39996799

Start: 1860497

End: 1861210

Strand: Reverse

Name: 39996799

Synonym: GSU1699

Alternate gene names: NA

Gene position: 1861210-1860497 (Counterclockwise)

Preceding gene: 39996800

Following gene: 39996795

Centisome position: 48.8

GC content: 59.8

Gene sequence:

>714_bases
ATGGACCAGTTGATACAGACAAGACGAAGCGATGCGCCGATGCTCTGGACCATCGCCCTTTCCATTGCATTGCACGGAGC
ACTCTATTCCGTAACCTCACTCCTGCCGCGCCATGTGGCCGGCGTTGAAGGGATGCAGGTCGTTTCCGTGGATCTGTCCG
GCAGTGAAATTCGCCCCGTTGCGCCATCACCGCCCGACAGCAAGCCGGCACCCGTACCTGAACCTGCTGTTGCGAGCGAC
ATGAGTTTGCCGGTGGAAAACGAGCAACCACCTGCCGAAGAAGTTCTTCCGCCCCCCCAGGCGGTTGAGCCGCCTCCCCC
GCCGGTGGTTTCGGCGCCCCCCTCGCCTCTTTCGCTGGGCATGTCCCGCGGCTTTTTCCGCGGCATAGCCGAAGGCGAAT
CCCTGAGAAGCGATGTCCGCGAATATTACTTTACGCTGCTGGAAACCATAAACGAGCGGTGGTGGACGGTTGCGAACGCG
TCTGGAATGGATCTGGGTCGTTCGGAGGCGATGTTCACCATTGTGATGAAGAAAAGCGGCGAGATGGTTGACGTGCAGCT
GGTGAAGAGTACGGGAAGTCCGGCCTATGACCGGTTGATTCTCCAGGCGATTCAAGCGGCTAACCCCTTGCCCCCCCTGC
CTGACAGCTATACCAGCGAGTTGTTTTTGGCCCCGGTCCGACTTGTGGCGCCCCGGGGACTGCTCTTTTCGTAA

Upstream 100 bases:

>100_bases
CGCAAAATCCGATAGGTAAACAAGAAATCGGGTTGTCACGGCCTTGGGGAAAAAGGTAGAATGACCACGTAACGTACCTA
CTCCGCCTGGGAGTCAGTCC

Downstream 100 bases:

>100_bases
AAGGCGTTACGGCGTTTCCTCAAGATCAACAAGATCCGCATCGGCAAGGCCGTCGTGGCCCAGATGCTCCAGCTTGCCGG
CCGTGTCACGGAAAGCTGGG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MDQLIQTRRSDAPMLWTIALSIALHGALYSVTSLLPRHVAGVEGMQVVSVDLSGSEIRPVAPSPPDSKPAPVPEPAVASD
MSLPVENEQPPAEEVLPPPQAVEPPPPPVVSAPPSPLSLGMSRGFFRGIAEGESLRSDVREYYFTLLETINERWWTVANA
SGMDLGRSEAMFTIVMKKSGEMVDVQLVKSTGSPAYDRLILQAIQAANPLPPLPDSYTSELFLAPVRLVAPRGLLFS

Sequences:

>Translated_237_residues
MDQLIQTRRSDAPMLWTIALSIALHGALYSVTSLLPRHVAGVEGMQVVSVDLSGSEIRPVAPSPPDSKPAPVPEPAVASD
MSLPVENEQPPAEEVLPPPQAVEPPPPPVVSAPPSPLSLGMSRGFFRGIAEGESLRSDVREYYFTLLETINERWWTVANA
SGMDLGRSEAMFTIVMKKSGEMVDVQLVKSTGSPAYDRLILQAIQAANPLPPLPDSYTSELFLAPVRLVAPRGLLFS
>Mature_237_residues
MDQLIQTRRSDAPMLWTIALSIALHGALYSVTSLLPRHVAGVEGMQVVSVDLSGSEIRPVAPSPPDSKPAPVPEPAVASD
MSLPVENEQPPAEEVLPPPQAVEPPPPPVVSAPPSPLSLGMSRGFFRGIAEGESLRSDVREYYFTLLETINERWWTVANA
SGMDLGRSEAMFTIVMKKSGEMVDVQLVKSTGSPAYDRLILQAIQAANPLPPLPDSYTSELFLAPVRLVAPRGLLFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25517; Mature: 25517

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQLIQTRRSDAPMLWTIALSIALHGALYSVTSLLPRHVAGVEGMQVVSVDLSGSEIRPV
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
APSPPDSKPAPVPEPAVASDMSLPVENEQPPAEEVLPPPQAVEPPPPPVVSAPPSPLSLG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
MSRGFFRGIAEGESLRSDVREYYFTLLETINERWWTVANASGMDLGRSEAMFTIVMKKSG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEEEECCC
EMVDVQLVKSTGSPAYDRLILQAIQAANPLPPLPDSYTSELFLAPVRLVAPRGLLFS
CEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDQLIQTRRSDAPMLWTIALSIALHGALYSVTSLLPRHVAGVEGMQVVSVDLSGSEIRPV
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
APSPPDSKPAPVPEPAVASDMSLPVENEQPPAEEVLPPPQAVEPPPPPVVSAPPSPLSLG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
MSRGFFRGIAEGESLRSDVREYYFTLLETINERWWTVANASGMDLGRSEAMFTIVMKKSG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEEEECCC
EMVDVQLVKSTGSPAYDRLILQAIQAANPLPPLPDSYTSELFLAPVRLVAPRGLLFS
CEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA