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The map label for this gene is 39996785

Identifier: 39996785

GI number: 39996785

Start: 1845619

End: 1846164

Strand: Reverse

Name: 39996785

Synonym: GSU1685

Alternate gene names: NA

Gene position: 1846164-1845619 (Counterclockwise)

Preceding gene: 39996794

Following gene: 39996784

Centisome position: 48.4

GC content: 62.64

Gene sequence:

>546_bases
ATGACCCCTGAAAACCTGCTCACTCGTCATTTCGGCCCGGCAACTACAGCCTGCGGCATCGTGCTCGCCCATAGCCGCCA
CGTGGCGGCCAAGGCCCTGGCAGTGGCGCGTCGGCTCCGGGACCCGTTGCTCGATCTTCGGTTCATAGAAGAAGCGGCCC
TGCTCCACGACATCGGCGTCTGCCGGACCAATTCCACGGGCATCGGCTGCACCGGCGAGGCCCCCTATATCCTCCACGGC
ATCATCGGTCGGGAGATTCTGGAGGCCGAGGGGCTCCCCCGGCACGCCCTCGTCTGCGAACGTCATATCGGTGTCGGCCT
CACCGTCGAGGACATCGAACGTCAGAGTCTGCCCCTGCCTCGGCGCGACATGGTCCCCCTTACCCGGGAAGAGCGAATCG
TCTGCTTTGCCGACCTGTTCTTTTCCAAAAAACCCCGCTCCCTCGACCACGAAAAGCACCCCGACGAAGTGAGAGCGAAT
CTGCGGCGTTACGGCGACCATAAGGTTGCCATCTTCGAGGAGTGGTTGGCTGAATTTGCGGTATAG

Upstream 100 bases:

>100_bases
CCCTTTGACGCGGGGTTGCACCGGGCAAATGCATGATTGACAGAGGAACGCCAAGGTTCGGATAATGAGACATTACTGCC
AGCGCGAAAGAGGTTTGCCC

Downstream 100 bases:

>100_bases
TTGAAACAGTGAACAGTGAAGGATTCACTCACAGGAGAGGTGAACGAGCCATGGCGGCACCGGCAGCGCTGAAGAGAATA
TCTGCAACGGTTTGGGAGCT

Product: HD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTPENLLTRHFGPATTACGIVLAHSRHVAAKALAVARRLRDPLLDLRFIEEAALLHDIGVCRTNSTGIGCTGEAPYILHG
IIGREILEAEGLPRHALVCERHIGVGLTVEDIERQSLPLPRRDMVPLTREERIVCFADLFFSKKPRSLDHEKHPDEVRAN
LRRYGDHKVAIFEEWLAEFAV

Sequences:

>Translated_181_residues
MTPENLLTRHFGPATTACGIVLAHSRHVAAKALAVARRLRDPLLDLRFIEEAALLHDIGVCRTNSTGIGCTGEAPYILHG
IIGREILEAEGLPRHALVCERHIGVGLTVEDIERQSLPLPRRDMVPLTREERIVCFADLFFSKKPRSLDHEKHPDEVRAN
LRRYGDHKVAIFEEWLAEFAV
>Mature_180_residues
TPENLLTRHFGPATTACGIVLAHSRHVAAKALAVARRLRDPLLDLRFIEEAALLHDIGVCRTNSTGIGCTGEAPYILHGI
IGREILEAEGLPRHALVCERHIGVGLTVEDIERQSLPLPRRDMVPLTREERIVCFADLFFSKKPRSLDHEKHPDEVRANL
RRYGDHKVAIFEEWLAEFAV

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004454
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20338; Mature: 20207

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPENLLTRHFGPATTACGIVLAHSRHVAAKALAVARRLRDPLLDLRFIEEAALLHDIGV
CCCHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRTNSTGIGCTGEAPYILHGIIGREILEAEGLPRHALVCERHIGVGLTVEDIERQSLPLP
EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCC
RRDMVPLTREERIVCFADLFFSKKPRSLDHEKHPDEVRANLRRYGDHKVAIFEEWLAEFA
CCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC
V
C
>Mature Secondary Structure 
TPENLLTRHFGPATTACGIVLAHSRHVAAKALAVARRLRDPLLDLRFIEEAALLHDIGV
CCHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRTNSTGIGCTGEAPYILHGIIGREILEAEGLPRHALVCERHIGVGLTVEDIERQSLPLP
EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCC
RRDMVPLTREERIVCFADLFFSKKPRSLDHEKHPDEVRANLRRYGDHKVAIFEEWLAEFA
CCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]