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The map label for this gene is yrfG [H]

Identifier: 39996794

GI number: 39996794

Start: 1852555

End: 1853229

Strand: Reverse

Name: yrfG [H]

Synonym: GSU1694

Alternate gene names: 39996794

Gene position: 1853229-1852555 (Counterclockwise)

Preceding gene: 39996795

Following gene: 39996785

Centisome position: 48.59

GC content: 57.78

Gene sequence:

>675_bases
ATGAAACTTGACTGGAACGGCATCGATACCGTGCTCCTGGATATGGACGGCACGCTCCTCGACCGCCATTTCGACGACCA
CTTCTGGCTCGAACACGTACCCAAACGCTATGCCGCCCAGAACGGCATCCCCCTGGACGAAGCGAAAAAACTTCTCTACG
CTCTGTTCCGTTCCCAGGAGAGGACCTTGAACTGGACCGACCTGGATTACTGGTCGGAGCGACTCGGGCTCGACATCCCC
GTTCTGAAGCAGGAGATCGATCACCTAATCGCGGTCCACCCCGGCGTGGTGGAGTTCCTGGTCTTTCTTCGCCGGCACGG
CAAACAGGCCTGGCTCGTGACCAATGCTCACGGCAAGACCCTCTCACTGAAGATGCGCAAAACCCGGCTCGGGCCCTATT
TCACCGGCATCATTTCCGCTCATGATCTGGGCCTTCCCAAGGAAGACGTGCGTTTTTGGGAAAAACTACAGGAGCGTGTC
CCCTATGAGCCTTCCCGAACCCTGCTGGGGGAAGACAGCGAAACCAACCTCGGCACCGCCGAGGAGTACGGCATCGCCCA
CCTCATCTATGTGAGTCGCTACAGCTCAACAGTCACACCCACAGCATCGGATCGCTACGCCTCGATTCACTATTTTACGC
AACTCATCCCAGCCGCCCATACCGACGAGACATGA

Upstream 100 bases:

>100_bases
CCTGCCGAGCCGGTGCGAGGTGCTTGACGCACGTATCGAGCAGATCAGGACCTTCATCGAGGAGAAGGCCCGCTAAGGGC
CTTTTTCGTTACGAACCGCC

Downstream 100 bases:

>100_bases
AAAAAGGCAGCCTGCAACGGCTGCCTTTCTCTGTCACAAATTTCCGGCATTACGTTTTTATTCCAAGTTGTCCTCAATCC
TGATGAACCTGCTCTTCTCG

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKLDWNGIDTVLLDMDGTLLDRHFDDHFWLEHVPKRYAAQNGIPLDEAKKLLYALFRSQERTLNWTDLDYWSERLGLDIP
VLKQEIDHLIAVHPGVVEFLVFLRRHGKQAWLVTNAHGKTLSLKMRKTRLGPYFTGIISAHDLGLPKEDVRFWEKLQERV
PYEPSRTLLGEDSETNLGTAEEYGIAHLIYVSRYSSTVTPTASDRYASIHYFTQLIPAAHTDET

Sequences:

>Translated_224_residues
MKLDWNGIDTVLLDMDGTLLDRHFDDHFWLEHVPKRYAAQNGIPLDEAKKLLYALFRSQERTLNWTDLDYWSERLGLDIP
VLKQEIDHLIAVHPGVVEFLVFLRRHGKQAWLVTNAHGKTLSLKMRKTRLGPYFTGIISAHDLGLPKEDVRFWEKLQERV
PYEPSRTLLGEDSETNLGTAEEYGIAHLIYVSRYSSTVTPTASDRYASIHYFTQLIPAAHTDET
>Mature_224_residues
MKLDWNGIDTVLLDMDGTLLDRHFDDHFWLEHVPKRYAAQNGIPLDEAKKLLYALFRSQERTLNWTDLDYWSERLGLDIP
VLKQEIDHLIAVHPGVVEFLVFLRRHGKQAWLVTNAHGKTLSLKMRKTRLGPYFTGIISAHDLGLPKEDVRFWEKLQERV
PYEPSRTLLGEDSETNLGTAEEYGIAHLIYVSRYSSTVTPTASDRYASIHYFTQLIPAAHTDET

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082259, Length=218, Percent_Identity=38.0733944954128, Blast_Score=160, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25890; Mature: 25890

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDWNGIDTVLLDMDGTLLDRHFDDHFWLEHVPKRYAAQNGIPLDEAKKLLYALFRSQE
CCCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
RTLNWTDLDYWSERLGLDIPVLKQEIDHLIAVHPGVVEFLVFLRRHGKQAWLVTNAHGKT
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCE
LSLKMRKTRLGPYFTGIISAHDLGLPKEDVRFWEKLQERVPYEPSRTLLGEDSETNLGTA
EEEEEHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
EEYGIAHLIYVSRYSSTVTPTASDRYASIHYFTQLIPAAHTDET
HHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKLDWNGIDTVLLDMDGTLLDRHFDDHFWLEHVPKRYAAQNGIPLDEAKKLLYALFRSQE
CCCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
RTLNWTDLDYWSERLGLDIPVLKQEIDHLIAVHPGVVEFLVFLRRHGKQAWLVTNAHGKT
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCE
LSLKMRKTRLGPYFTGIISAHDLGLPKEDVRFWEKLQERVPYEPSRTLLGEDSETNLGTA
EEEEEHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
EEYGIAHLIYVSRYSSTVTPTASDRYASIHYFTQLIPAAHTDET
HHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]