| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996606
Identifier: 39996606
GI number: 39996606
Start: 1651202
End: 1652161
Strand: Direct
Name: 39996606
Synonym: GSU1506
Alternate gene names: NA
Gene position: 1651202-1652161 (Clockwise)
Preceding gene: 39996605
Following gene: 39996607
Centisome position: 43.29
GC content: 53.54
Gene sequence:
>960_bases ATGACTGGCATCGTCACTGCAAATTGGTGGACCTCACTGATATACCGGGTGTTTGTCCGAACAGCCTGTTTACGTGCAGG GAGAGGATTGCTTCCGAATATTTGGGAGTGGCTGTGGCGCTTGAGTTGCAACATCATTGAAGGGCCAGTTGATATTACCA TTCACAACCGCCCCGCCATCGTCAACTTTGGATACACCTATCCAATTTACATGCGCTGCTACCCCGAACTGAACGCTCCG TTGGTGGAGTTGACCTATCAATGCTGGCGATCACGAGGTACTGCGATTTGCATCGTCGATGTCGGGGCAGCCGTTGGGGA CACCATGCTATTGCTACATTCCAACCTCCCCGAAGCTGTCGGTTCTTTCGTATGTATTGAAGGAGACCAGGAGTTTTACC GTTACCTCCAACACAATCTGGGGCACATGACGGAGGGAAGACTAATTAATGTCGTGGTGGCCGACCAGGAGACTGAGGTC TCGGATCTGGTCAGGATTCATACCGGCACCGCGAGCGCCCAAGGGGAGAGGACCCGTGGCGCAAGTACCCTGTCTGCGGT AGTTACGGAAGAGATTGACCTGATTAAAATTGATGTCGATGGCTTCGATGGGCGGGTGTTGCTTGGCGCAGAAGACTTAC TGAAACGCTGCCGTCCGTTGGTGATTTTTGAGTGGCATCCCAGCCTCTGTCGCCAAACTGGGAACAACTGGACCGATCAT TTTGATGTCCTCGCGCGTTGTGGCTACTCCCGGTGCCTGTGGTTCACAAAATTTGGTCACTTCAGCCACTTCAGTTTCGG CCACTGCCGCGAGGAGATCGATACCCTCGCCGAGTACTGTATGAGTGACGTAGTGAAGGACTGGCATTACGACGTGATCG CCTTACACGATGACAGCGATCTTTCTCTGCTGCTGCTTTCGCAACTGGGGTTTGCGAAGGCCAGGCCGTCCCGGTACTGA
Upstream 100 bases:
>100_bases TTGGGTTTTGCATCGATGATATGGGCTCGCTTGCGACTCTGATGAAGGATGGTCGGCTAGGAGTTGTGACCCCCCTGATG CCTTGGGACGAGGTTCGTTT
Downstream 100 bases:
>100_bases TGATGTCACATTTGATTCATAGGGTTACGGAGCGATTGGAATATCTGTTCCTGCGAATCTGGTGTCTGAAGATGCTTTGC AAGATGAGACGAGAAGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTGIVTANWWTSLIYRVFVRTACLRAGRGLLPNIWEWLWRLSCNIIEGPVDITIHNRPAIVNFGYTYPIYMRCYPELNAP LVELTYQCWRSRGTAICIVDVGAAVGDTMLLLHSNLPEAVGSFVCIEGDQEFYRYLQHNLGHMTEGRLINVVVADQETEV SDLVRIHTGTASAQGERTRGASTLSAVVTEEIDLIKIDVDGFDGRVLLGAEDLLKRCRPLVIFEWHPSLCRQTGNNWTDH FDVLARCGYSRCLWFTKFGHFSHFSFGHCREEIDTLAEYCMSDVVKDWHYDVIALHDDSDLSLLLLSQLGFAKARPSRY
Sequences:
>Translated_319_residues MTGIVTANWWTSLIYRVFVRTACLRAGRGLLPNIWEWLWRLSCNIIEGPVDITIHNRPAIVNFGYTYPIYMRCYPELNAP LVELTYQCWRSRGTAICIVDVGAAVGDTMLLLHSNLPEAVGSFVCIEGDQEFYRYLQHNLGHMTEGRLINVVVADQETEV SDLVRIHTGTASAQGERTRGASTLSAVVTEEIDLIKIDVDGFDGRVLLGAEDLLKRCRPLVIFEWHPSLCRQTGNNWTDH FDVLARCGYSRCLWFTKFGHFSHFSFGHCREEIDTLAEYCMSDVVKDWHYDVIALHDDSDLSLLLLSQLGFAKARPSRY >Mature_318_residues TGIVTANWWTSLIYRVFVRTACLRAGRGLLPNIWEWLWRLSCNIIEGPVDITIHNRPAIVNFGYTYPIYMRCYPELNAPL VELTYQCWRSRGTAICIVDVGAAVGDTMLLLHSNLPEAVGSFVCIEGDQEFYRYLQHNLGHMTEGRLINVVVADQETEVS DLVRIHTGTASAQGERTRGASTLSAVVTEEIDLIKIDVDGFDGRVLLGAEDLLKRCRPLVIFEWHPSLCRQTGNNWTDHF DVLARCGYSRCLWFTKFGHFSHFSFGHCREEIDTLAEYCMSDVVKDWHYDVIALHDDSDLSLLLLSQLGFAKARPSRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36299; Mature: 36168
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIVTANWWTSLIYRVFVRTACLRAGRGLLPNIWEWLWRLSCNIIEGPVDITIHNRPAI CCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEECCCEEEEECCCCEE VNFGYTYPIYMRCYPELNAPLVELTYQCWRSRGTAICIVDVGAAVGDTMLLLHSNLPEAV EECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHCCEEEEEECCCHHHH GSFVCIEGDQEFYRYLQHNLGHMTEGRLINVVVADQETEVSDLVRIHTGTASAQGERTRG CCEEEEECCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHEEEECCCCCCCCCCCCC ASTLSAVVTEEIDLIKIDVDGFDGRVLLGAEDLLKRCRPLVIFEWHPSLCRQTGNNWTDH HHHHHHHHHCCCEEEEEEECCCCCEEEECHHHHHHHCCCEEEEECCHHHHHHCCCCCHHH FDVLARCGYSRCLWFTKFGHFSHFSFGHCREEIDTLAEYCMSDVVKDWHYDVIALHDDSD HHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC LSLLLLSQLGFAKARPSRY CHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TGIVTANWWTSLIYRVFVRTACLRAGRGLLPNIWEWLWRLSCNIIEGPVDITIHNRPAI CCEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEECCCEEEEECCCCEE VNFGYTYPIYMRCYPELNAPLVELTYQCWRSRGTAICIVDVGAAVGDTMLLLHSNLPEAV EECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHCCEEEEEECCCHHHH GSFVCIEGDQEFYRYLQHNLGHMTEGRLINVVVADQETEVSDLVRIHTGTASAQGERTRG CCEEEEECCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHEEEECCCCCCCCCCCCC ASTLSAVVTEEIDLIKIDVDGFDGRVLLGAEDLLKRCRPLVIFEWHPSLCRQTGNNWTDH HHHHHHHHHCCCEEEEEEECCCCCEEEECHHHHHHHCCCEEEEECCHHHHHHCCCCCHHH FDVLARCGYSRCLWFTKFGHFSHFSFGHCREEIDTLAEYCMSDVVKDWHYDVIALHDDSD HHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC LSLLLLSQLGFAKARPSRY CHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA