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The map label for this gene is rfaQ [C]

Identifier: 39996607

GI number: 39996607

Start: 1652233

End: 1653195

Strand: Direct

Name: rfaQ [C]

Synonym: GSU1507

Alternate gene names: 39996607

Gene position: 1652233-1653195 (Clockwise)

Preceding gene: 39996606

Following gene: 39996608

Centisome position: 43.32

GC content: 49.64

Gene sequence:

>963_bases
ATGCTTTGCAAGATGAGACGAGAAGGAAGAAGGGTGATCGTCATAACCTTGCTTGAACATCTCGGTGATATCGTGGCGTG
CGAACCAGTGGCCAGGTATGTGAGGAGCCAAGAACCTAACTCCTTCCTGATATGGTTTGTATCACCGACCTACCGGGAGA
TTGTCGAAACCTACGCCTCGTTGGACAGGGTCAGGACGATCAACTGTATTACTTCTTGGTCCAGACTTCGCAGATCAGTC
CGATTCGACCGGGTTGTTGATCTCCATATCGATGGGCGTGTCTGTCCCACCTGCCGGATCCCTCACGGCAATTTTGATGG
CGACCGCTCCATTAACCTGAGCAACTACTTTTATTATGGGTCGCTATTAGGTAGCTTTTGCAAAGCTGCCGGCCTTCCGG
CGCTGGACGACCAGCCAGTTTTGCACCTTCCAAAGCGAGTCAAGGGCTGTGTCGCTTCTCTGCGCCTTGCCGAGCAGTAT
CTAGTAATACATTGTAATTCAAATGAACTATGCAAGGACTGGAGCTCACAGAAGTGGAACAAATTATTAGACCGCCTCGC
CTTGGACGACATCAAGGTAATTGAGGTAGGCTTACAGTCCGATCTTGGTCGTAGTCAGTCTGAACACTACATTGACCTCT
GCGGGAAGCTCTCTCTTCTGGAGACGGCAGAGGTGATTCGGGGATCCAAGCTCTTTGTCGGGATCGACAGTGGTCCTGCG
CATATTGCTAATGCCGTTGGGACGTATGGAATAATTCTTCTTGGTCAATACAGGGCCTTCAATTGTTACCAACCTTACAG
TGGAGCGTTTGCAGATGGCAGCATGGCCTCTGTGATTTATAGTAAAAGTCACGTTCGGGATATTTCAGTGAACACAGTAT
ACCAGGAGATAAGCCGTGTGCTTACTCTCTCTGCCACCTTATCGGCTGTGGCTTCTAACAACAAAAGCAGGGCTAATGCA
TAG

Upstream 100 bases:

>100_bases
TTGCGAAGGCCAGGCCGTCCCGGTACTGATGATGTCACATTTGATTCATAGGGTTACGGAGCGATTGGAATATCTGTTCC
TGCGAATCTGGTGTCTGAAG

Downstream 100 bases:

>100_bases
ATTGCATTCTATTTTCACAGCATCACCCCGTGCTCGAAAATGATCTCTGTGGGGAAAGGGAAAATCATGATTACTCCCGA
CCACAATATTATCAAACCTA

Product: heptosyltransferase

Products: NA

Alternate protein names: Heptosyltransferase Family Protein; Glycosyltransferase

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLCKMRREGRRVIVITLLEHLGDIVACEPVARYVRSQEPNSFLIWFVSPTYREIVETYASLDRVRTINCITSWSRLRRSV
RFDRVVDLHIDGRVCPTCRIPHGNFDGDRSINLSNYFYYGSLLGSFCKAAGLPALDDQPVLHLPKRVKGCVASLRLAEQY
LVIHCNSNELCKDWSSQKWNKLLDRLALDDIKVIEVGLQSDLGRSQSEHYIDLCGKLSLLETAEVIRGSKLFVGIDSGPA
HIANAVGTYGIILLGQYRAFNCYQPYSGAFADGSMASVIYSKSHVRDISVNTVYQEISRVLTLSATLSAVASNNKSRANA

Sequences:

>Translated_320_residues
MLCKMRREGRRVIVITLLEHLGDIVACEPVARYVRSQEPNSFLIWFVSPTYREIVETYASLDRVRTINCITSWSRLRRSV
RFDRVVDLHIDGRVCPTCRIPHGNFDGDRSINLSNYFYYGSLLGSFCKAAGLPALDDQPVLHLPKRVKGCVASLRLAEQY
LVIHCNSNELCKDWSSQKWNKLLDRLALDDIKVIEVGLQSDLGRSQSEHYIDLCGKLSLLETAEVIRGSKLFVGIDSGPA
HIANAVGTYGIILLGQYRAFNCYQPYSGAFADGSMASVIYSKSHVRDISVNTVYQEISRVLTLSATLSAVASNNKSRANA
>Mature_320_residues
MLCKMRREGRRVIVITLLEHLGDIVACEPVARYVRSQEPNSFLIWFVSPTYREIVETYASLDRVRTINCITSWSRLRRSV
RFDRVVDLHIDGRVCPTCRIPHGNFDGDRSINLSNYFYYGSLLGSFCKAAGLPALDDQPVLHLPKRVKGCVASLRLAEQY
LVIHCNSNELCKDWSSQKWNKLLDRLALDDIKVIEVGLQSDLGRSQSEHYIDLCGKLSLLETAEVIRGSKLFVGIDSGPA
HIANAVGTYGIILLGQYRAFNCYQPYSGAFADGSMASVIYSKSHVRDISVNTVYQEISRVLTLSATLSAVASNNKSRANA

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35799; Mature: 35799

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCKMRREGRRVIVITLLEHLGDIVACEPVARYVRSQEPNSFLIWFVSPTYREIVETYAS
CCCCCCCCCCEEEEEEHHHHHCCCEEHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHH
LDRVRTINCITSWSRLRRSVRFDRVVDLHIDGRVCPTCRIPHGNFDGDRSINLSNYFYYG
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEECCEEECCCCCCCCCCEEECCHHHHHH
SLLGSFCKAAGLPALDDQPVLHLPKRVKGCVASLRLAEQYLVIHCNSNELCKDWSSQKWN
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHCHHHHH
KLLDRLALDDIKVIEVGLQSDLGRSQSEHYIDLCGKLSLLETAEVIRGSKLFVGIDSGPA
HHHHHHHCCCHHEEEECHHHHCCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCHH
HIANAVGTYGIILLGQYRAFNCYQPYSGAFADGSMASVIYSKSHVRDISVNTVYQEISRV
HHHHHHHHCEEEEEECCCEEECCCCCCCCCCCCCHHHHHHHHHHCEECHHHHHHHHHHHH
LTLSATLSAVASNNKSRANA
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLCKMRREGRRVIVITLLEHLGDIVACEPVARYVRSQEPNSFLIWFVSPTYREIVETYAS
CCCCCCCCCCEEEEEEHHHHHCCCEEHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHH
LDRVRTINCITSWSRLRRSVRFDRVVDLHIDGRVCPTCRIPHGNFDGDRSINLSNYFYYG
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEECCEEECCCCCCCCCCEEECCHHHHHH
SLLGSFCKAAGLPALDDQPVLHLPKRVKGCVASLRLAEQYLVIHCNSNELCKDWSSQKWN
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHCHHHHH
KLLDRLALDDIKVIEVGLQSDLGRSQSEHYIDLCGKLSLLETAEVIRGSKLFVGIDSGPA
HHHHHHHCCCHHEEEECHHHHCCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCHH
HIANAVGTYGIILLGQYRAFNCYQPYSGAFADGSMASVIYSKSHVRDISVNTVYQEISRV
HHHHHHHHCEEEEEECCCEEECCCCCCCCCCCCCHHHHHHHHHHCEECHHHHHHHHHHHH
LTLSATLSAVASNNKSRANA
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA