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The map label for this gene is lemA [H]

Identifier: 39996577

GI number: 39996577

Start: 1617666

End: 1618250

Strand: Direct

Name: lemA [H]

Synonym: GSU1477

Alternate gene names: 39996577

Gene position: 1617666-1618250 (Clockwise)

Preceding gene: 39996576

Following gene: 39996578

Centisome position: 42.41

GC content: 57.61

Gene sequence:

>585_bases
ATGAAACGACTGGTGATGGTAGTGACAGCACTGCTCGGATTGTCGCTGCTTTCGGGCTGCGGCTACAACGTGATGCAAGC
CAACGAAGAGGCGGTATTTTCCGCGTGGGGCGACGTAGAGGCGGCGTACCAGCGGCGGGCCGATCTCATTCCCAACTTGG
TGGAGGTGGTCAAGGGGTACGCGAAGCATGAGGCTGAAACCCTGACGGCGGTAACCGAAGCCCGGGCCAAGGTCGGGTCA
ATGCAGGTGACCCGCGATGCCGTGAACAATCCGGAAACCCTGGCCAAGTTTCAACAGGCCCAAGGGGAACTCTCCAGCGC
GCTCTCACGGCTCATGGTCGTGGTGGAACGATATCCGGATCTGAAGGCCAACCAGAACTTCCTCGATCTCCAGAACCAGT
TGGAAGGGACCGAAAATCGGATCAATGTAGCCCGGACCCGTTACAACAAGGCGGTACAGGACTTCAATACCAGCATCAGA
ACCTTCCCCAACAGCCTTACGAACAAGCTGCTGCTTCACCTGGAACGCAAGGAACCGTTCAAGGCAGACGAAGGCGCCAA
GGCCGCGCCTAAAGTGAAGTTTTGA

Upstream 100 bases:

>100_bases
GTGCGGTGATCGTTATGAAAATGAGCTATGGGGGGGATGACAACCGGCCGGCTGATGATTATCCTTGTGAGTGACATTAT
TCCAGGATGGTGGAGGACCC

Downstream 100 bases:

>100_bases
CGAGGTCCCGGATTTCCGGTCTGAACATGAAGCGCCTGCTTCTCGCCATATGCATCATTCTGTTCCCGACACTCGTTGCA
GCACGCGACGTGCCGCAACT

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKRLVMVVTALLGLSLLSGCGYNVMQANEEAVFSAWGDVEAAYQRRADLIPNLVEVVKGYAKHEAETLTAVTEARAKVGS
MQVTRDAVNNPETLAKFQQAQGELSSALSRLMVVVERYPDLKANQNFLDLQNQLEGTENRINVARTRYNKAVQDFNTSIR
TFPNSLTNKLLLHLERKEPFKADEGAKAAPKVKF

Sequences:

>Translated_194_residues
MKRLVMVVTALLGLSLLSGCGYNVMQANEEAVFSAWGDVEAAYQRRADLIPNLVEVVKGYAKHEAETLTAVTEARAKVGS
MQVTRDAVNNPETLAKFQQAQGELSSALSRLMVVVERYPDLKANQNFLDLQNQLEGTENRINVARTRYNKAVQDFNTSIR
TFPNSLTNKLLLHLERKEPFKADEGAKAAPKVKF
>Mature_194_residues
MKRLVMVVTALLGLSLLSGCGYNVMQANEEAVFSAWGDVEAAYQRRADLIPNLVEVVKGYAKHEAETLTAVTEARAKVGS
MQVTRDAVNNPETLAKFQQAQGELSSALSRLMVVVERYPDLKANQNFLDLQNQLEGTENRINVARTRYNKAVQDFNTSIR
TFPNSLTNKLLLHLERKEPFKADEGAKAAPKVKF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 21585; Mature: 21585

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLVMVVTALLGLSLLSGCGYNVMQANEEAVFSAWGDVEAAYQRRADLIPNLVEVVKGY
CHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AKHEAETLTAVTEARAKVGSMQVTRDAVNNPETLAKFQQAQGELSSALSRLMVVVERYPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LKANQNFLDLQNQLEGTENRINVARTRYNKAVQDFNTSIRTFPNSLTNKLLLHLERKEPF
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KADEGAKAAPKVKF
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKRLVMVVTALLGLSLLSGCGYNVMQANEEAVFSAWGDVEAAYQRRADLIPNLVEVVKGY
CHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AKHEAETLTAVTEARAKVGSMQVTRDAVNNPETLAKFQQAQGELSSALSRLMVVVERYPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LKANQNFLDLQNQLEGTENRINVARTRYNKAVQDFNTSIRTFPNSLTNKLLLHLERKEPF
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KADEGAKAAPKVKF
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]