Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39996576

Identifier: 39996576

GI number: 39996576

Start: 1617346

End: 1617639

Strand: Direct

Name: 39996576

Synonym: GSU1476

Alternate gene names: NA

Gene position: 1617346-1617639 (Clockwise)

Preceding gene: 39996575

Following gene: 39996577

Centisome position: 42.4

GC content: 56.8

Gene sequence:

>294_bases
ATGACCATCACGACCCTGCTCGGTCTTCTGGCGGGCACCCTTACGAGTGTGGCCGCCATCCCCCAGGTGGTCAGGGCCTT
CAGAACCAAACGGGTACGCGACATTTCGATCTGGCAGCCCCTGATTCTCGTTACCGGACTGTTCCTCTGGCTCGGGTATG
GTCTGCTCCTGCGCGATCTCCCGCTCATTGTCGCCAATATCGTTTCGATCATCTGCAACAGTGCGGTGATCGTTATGAAA
ATGAGCTATGGGGGGGATGACAACCGGCCGGCTGATGATTATCCTTGTGAGTGA

Upstream 100 bases:

>100_bases
TTGCACGCTCCGAGTTGGACAGCCGCGAGGTGGCCATCCTGCGCGGGATGATGACCCAGATCGATTGGGCCGCCGACCAG
TTCAAGGGAAAGAAGGGAGC

Downstream 100 bases:

>100_bases
CATTATTCCAGGATGGTGGAGGACCCATGAAACGACTGGTGATGGTAGTGACAGCACTGCTCGGATTGTCGCTGCTTTCG
GGCTGCGGCTACAACGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MTITTLLGLLAGTLTSVAAIPQVVRAFRTKRVRDISIWQPLILVTGLFLWLGYGLLLRDLPLIVANIVSIICNSAVIVMK
MSYGGDDNRPADDYPCE

Sequences:

>Translated_97_residues
MTITTLLGLLAGTLTSVAAIPQVVRAFRTKRVRDISIWQPLILVTGLFLWLGYGLLLRDLPLIVANIVSIICNSAVIVMK
MSYGGDDNRPADDYPCE
>Mature_96_residues
TITTLLGLLAGTLTSVAAIPQVVRAFRTKRVRDISIWQPLILVTGLFLWLGYGLLLRDLPLIVANIVSIICNSAVIVMKM
SYGGDDNRPADDYPCE

Specific function: Unknown

COG id: COG4095

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10633; Mature: 10502

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITTLLGLLAGTLTSVAAIPQVVRAFRTKRVRDISIWQPLILVTGLFLWLGYGLLLRDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLIVANIVSIICNSAVIVMKMSYGGDDNRPADDYPCE
HHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TITTLLGLLAGTLTSVAAIPQVVRAFRTKRVRDISIWQPLILVTGLFLWLGYGLLLRDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLIVANIVSIICNSAVIVMKMSYGGDDNRPADDYPCE
HHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA