| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is ygcG [H]
Identifier: 39996578
GI number: 39996578
Start: 1618247
End: 1619146
Strand: Direct
Name: ygcG [H]
Synonym: GSU1478
Alternate gene names: 39996578
Gene position: 1618247-1619146 (Clockwise)
Preceding gene: 39996577
Following gene: 39996579
Centisome position: 42.43
GC content: 62.56
Gene sequence:
>900_bases TTGACGAGGTCCCGGATTTCCGGTCTGAACATGAAGCGCCTGCTTCTCGCCATATGCATCATTCTGTTCCCGACACTCGT TGCAGCACGCGACGTGCCGCAACTTCACGGGTACGTGAACGATTACGCCGGACTCCTGTCTCCACAGGCAACTCAACGAG TGGAGCAGATTCTGGCCGATCTTGAACGGAGCGATTCGACCCAGATTGTCGTGTTGACCGTACCCTCCCTGGAGGGGGAC AGCCTTGAGGAGTTTTCCATCCGGGTGGCCGATGCCTGGCGAATCGGACAGAAAGGTGCGGACAACGGTGCCATTCTTCT GGTTGCCCGGGCCGAGCGGAAGGTGAGAATCGAGGTGGGACGGGGGCTCGAAGGACGCCTTACCGATCTTGTCTCCGGAC GGATCATCCGGGGCGATATTGCCCCCTATTTCAGGCAGGGGGATTACGACGGCGGAATTCTGGCCGGAGTGTCGGCCATG GCAGCCGTAGTGAAGGGAGAGTATGCCAACGCACCGCGCGACCTCAAACAGGGGAAGAAGAGTGCCCCTCCCATCATGGG GCTGCTCATTTTCGTCGGGGTTGCCTGCGTCTTTCTCGGAGCGTTTTCCCGTATCCTCGGCGGCCTCGCCGGTGCTGTCG GGTTACCGCTGGTTACCGTGCTTACCATGCCGGGGCTCGGCCTTGTTTTGCTTGCCGGCCTTGCGGTGGCCGGATTCGTG GCCGGCCTTGTGCTTACCTCGCTGTTCGGCGGCGGTGGCAGGGGTGGAGGAGGCTTTGGCGGTGGCCCGTACCTCGGCGG TGGTTTTGGGGGAGGGTACGGTGGAGGCTGGTCGTCGGGGGGCGGTTTTTCTGGGGGCGGTGGCGGTTTCGGTGGCGGTG GAGCTTCGGGCGACTGGTGA
Upstream 100 bases:
>100_bases CCTTCCCCAACAGCCTTACGAACAAGCTGCTGCTTCACCTGGAACGCAAGGAACCGTTCAAGGCAGACGAAGGCGCCAAG GCCGCGCCTAAAGTGAAGTT
Downstream 100 bases:
>100_bases GGCGAGGTAATCGGGCATGAAGGCTGAATTGTTTTTTTCGTCCGCGGAAATGGAGCGAATCCGCAACGCCGTGGCTGCTG CAGAAGCGGCTACTTCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTRSRISGLNMKRLLLAICIILFPTLVAARDVPQLHGYVNDYAGLLSPQATQRVEQILADLERSDSTQIVVLTVPSLEGD SLEEFSIRVADAWRIGQKGADNGAILLVARAERKVRIEVGRGLEGRLTDLVSGRIIRGDIAPYFRQGDYDGGILAGVSAM AAVVKGEYANAPRDLKQGKKSAPPIMGLLIFVGVACVFLGAFSRILGGLAGAVGLPLVTVLTMPGLGLVLLAGLAVAGFV AGLVLTSLFGGGGRGGGGFGGGPYLGGGFGGGYGGGWSSGGGFSGGGGGFGGGGASGDW
Sequences:
>Translated_299_residues MTRSRISGLNMKRLLLAICIILFPTLVAARDVPQLHGYVNDYAGLLSPQATQRVEQILADLERSDSTQIVVLTVPSLEGD SLEEFSIRVADAWRIGQKGADNGAILLVARAERKVRIEVGRGLEGRLTDLVSGRIIRGDIAPYFRQGDYDGGILAGVSAM AAVVKGEYANAPRDLKQGKKSAPPIMGLLIFVGVACVFLGAFSRILGGLAGAVGLPLVTVLTMPGLGLVLLAGLAVAGFV AGLVLTSLFGGGGRGGGGFGGGPYLGGGFGGGYGGGWSSGGGFSGGGGGFGGGGASGDW >Mature_298_residues TRSRISGLNMKRLLLAICIILFPTLVAARDVPQLHGYVNDYAGLLSPQATQRVEQILADLERSDSTQIVVLTVPSLEGDS LEEFSIRVADAWRIGQKGADNGAILLVARAERKVRIEVGRGLEGRLTDLVSGRIIRGDIAPYFRQGDYDGGILAGVSAMA AVVKGEYANAPRDLKQGKKSAPPIMGLLIFVGVACVFLGAFSRILGGLAGAVGLPLVTVLTMPGLGLVLLAGLAVAGFVA GLVLTSLFGGGGRGGGGFGGGPYLGGGFGGGYGGGWSSGGGFSGGGGGFGGGGASGDW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=160, Percent_Identity=31.25, Blast_Score=98, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 30306; Mature: 30174
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSRISGLNMKRLLLAICIILFPTLVAARDVPQLHGYVNDYAGLLSPQATQRVEQILAD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH LERSDSTQIVVLTVPSLEGDSLEEFSIRVADAWRIGQKGADNGAILLVARAERKVRIEVG HHCCCCCEEEEEEECCCCCCCHHHHHEEHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEC RGLEGRLTDLVSGRIIRGDIAPYFRQGDYDGGILAGVSAMAAVVKGEYANAPRDLKQGKK CCCCHHHHHHHCCCEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCC SAPPIMGLLIFVGVACVFLGAFSRILGGLAGAVGLPLVTVLTMPGLGLVLLAGLAVAGFV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AGLVLTSLFGGGGRGGGGFGGGPYLGGGFGGGYGGGWSSGGGFSGGGGGFGGGGASGDW HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRSRISGLNMKRLLLAICIILFPTLVAARDVPQLHGYVNDYAGLLSPQATQRVEQILAD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH LERSDSTQIVVLTVPSLEGDSLEEFSIRVADAWRIGQKGADNGAILLVARAERKVRIEVG HHCCCCCEEEEEEECCCCCCCHHHHHEEHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEC RGLEGRLTDLVSGRIIRGDIAPYFRQGDYDGGILAGVSAMAAVVKGEYANAPRDLKQGKK CCCCHHHHHHHCCCEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCC SAPPIMGLLIFVGVACVFLGAFSRILGGLAGAVGLPLVTVLTMPGLGLVLLAGLAVAGFV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AGLVLTSLFGGGGRGGGGFGGGPYLGGGFGGGYGGGWSSGGGFSGGGGGFGGGGASGDW HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]