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The map label for this gene is tylA [H]

Identifier: 39996521

GI number: 39996521

Start: 1557042

End: 1557725

Strand: Direct

Name: tylA [H]

Synonym: GSU1420

Alternate gene names: 39996521

Gene position: 1557042-1557725 (Clockwise)

Preceding gene: 39996520

Following gene: 39996522

Centisome position: 40.82

GC content: 61.99

Gene sequence:

>684_bases
ATGGCCGGTCAGGTGGTGGTGAACGATCACCTGGCGGATAAGGCCGGGCTCCAGGTTCCGGTGGAAGCCGAAATCCGGCT
CAAGGGGGAGGACATTCCTTTTGTGAGCCGGGGTGGCCTTAAGCTCGCGAGGGCATTGGAGGAGTTCGGTATCGATGTCG
CGGACATGACCGCCATTGACGTGGGTGCTTCCACCGGCGGCTTCACCGACTGCCTGCTCCAGCGCGGTGCCCGGAAGGTC
TATGCCGTTGACGTGGGGTACGGTCAACTGGCCTGGAAGCTGCGCCAGGACTCGCGCGTGGTGAATCTGGAAAAGACGAA
CATCCGCTATCTGGAACCCGGCGCTCTGCCGGAGACACCCGGCTTGGCAGTGATCGATGCGTCCTTCATTTCACTCGACA
AGGTCCTGCCCTCCACCCTGCGCCTTATCGGGGAAGAGGGTGTCATTGTCGCCCTCATCAAACCCCAGTTCGAGGTGGGA
CGGGGAGAGGTCGGCAAGGGCGGCGTGGTGCGCGACGAGGAGAAGCACCGCCGGGTGATTGCCGACGTCGTGGCCCTTGC
AGAAGGATTGGGCCTGATGGTTCTCGGCGTTACCGAGTCTCCCATTCTCGGGCCCAAGGGAAATCGTGAGTTTCTGATCC
ACCTTAAAAAGGCGGTTGGGGAGACCCCGCCCCATAACCGGTAA

Upstream 100 bases:

>100_bases
CTCATCAACGTTGAACACCGCAAAAAGCAGGGAGCGCCTCGACAAGCTTCTGGTCGACCGGGGGCTTGTCCAGTCGCGGG
AACGAGCCCGTGCGCTCATC

Downstream 100 bases:

>100_bases
TCCGACATCAGCCATGCCCATCCGATTCCTCCATACCGCCGACCTGCATCTCGACTCGCCCCTGCGCACGTTCGGCGACC
TTGCCCGTGAGCGCCGTCGC

Product: hemolysin A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MAGQVVVNDHLADKAGLQVPVEAEIRLKGEDIPFVSRGGLKLARALEEFGIDVADMTAIDVGASTGGFTDCLLQRGARKV
YAVDVGYGQLAWKLRQDSRVVNLEKTNIRYLEPGALPETPGLAVIDASFISLDKVLPSTLRLIGEEGVIVALIKPQFEVG
RGEVGKGGVVRDEEKHRRVIADVVALAEGLGLMVLGVTESPILGPKGNREFLIHLKKAVGETPPHNR

Sequences:

>Translated_227_residues
MAGQVVVNDHLADKAGLQVPVEAEIRLKGEDIPFVSRGGLKLARALEEFGIDVADMTAIDVGASTGGFTDCLLQRGARKV
YAVDVGYGQLAWKLRQDSRVVNLEKTNIRYLEPGALPETPGLAVIDASFISLDKVLPSTLRLIGEEGVIVALIKPQFEVG
RGEVGKGGVVRDEEKHRRVIADVVALAEGLGLMVLGVTESPILGPKGNREFLIHLKKAVGETPPHNR
>Mature_226_residues
AGQVVVNDHLADKAGLQVPVEAEIRLKGEDIPFVSRGGLKLARALEEFGIDVADMTAIDVGASTGGFTDCLLQRGARKVY
AVDVGYGQLAWKLRQDSRVVNLEKTNIRYLEPGALPETPGLAVIDASFISLDKVLPSTLRLIGEEGVIVALIKPQFEVGR
GEVGKGGVVRDEEKHRRVIADVVALAEGLGLMVLGVTESPILGPKGNREFLIHLKKAVGETPPHNR

Specific function: Unknown

COG id: COG1189

COG function: function code J; Predicted rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004538
- InterPro:   IPR002877
- InterPro:   IPR002942 [H]

Pfam domain/function: PF01728 FtsJ; PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 24330; Mature: 24198

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGQVVVNDHLADKAGLQVPVEAEIRLKGEDIPFVSRGGLKLARALEEFGIDVADMTAID
CCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCEEECCCHHHHHHHHHHCCCHHHEEEEE
VGASTGGFTDCLLQRGARKVYAVDVGYGQLAWKLRQDSRVVNLEKTNIRYLEPGALPETP
CCCCCCCHHHHHHHCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCEEEECCCCCCCCC
GLAVIDASFISLDKVLPSTLRLIGEEGVIVALIKPQFEVGRGEVGKGGVVRDEEKHRRVI
CEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCCCCCCHHHHHHHH
ADVVALAEGLGLMVLGVTESPILGPKGNREFLIHLKKAVGETPPHNR
HHHHHHHCCCCEEEEECCCCCCCCCCCCHHHEEEEHHHHCCCCCCCC
>Mature Secondary Structure 
AGQVVVNDHLADKAGLQVPVEAEIRLKGEDIPFVSRGGLKLARALEEFGIDVADMTAID
CCCEEEECCCCCCCCCCCCCEEEEEECCCCCCEEECCCHHHHHHHHHHCCCHHHEEEEE
VGASTGGFTDCLLQRGARKVYAVDVGYGQLAWKLRQDSRVVNLEKTNIRYLEPGALPETP
CCCCCCCHHHHHHHCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCEEEECCCCCCCCC
GLAVIDASFISLDKVLPSTLRLIGEEGVIVALIKPQFEVGRGEVGKGGVVRDEEKHRRVI
CEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCCCCCCHHHHHHHH
ADVVALAEGLGLMVLGVTESPILGPKGNREFLIHLKKAVGETPPHNR
HHHHHHHCCCCEEEEECCCCCCCCCCCCHHHEEEEHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 2507400 [H]