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The map label for this gene is 39996520

Identifier: 39996520

GI number: 39996520

Start: 1556494

End: 1556922

Strand: Direct

Name: 39996520

Synonym: GSU1419

Alternate gene names: NA

Gene position: 1556494-1556922 (Clockwise)

Preceding gene: 308513300

Following gene: 39996521

Centisome position: 40.81

GC content: 61.07

Gene sequence:

>429_bases
TTGAACTGTAATATAGGACATGCGCTGAAAAGGCTTAGAAGCGAGCGTGGGCTGACCCAGAAGGATCTGGCGGCGCTGGT
GAGTGGTGGCCTCGACTATACCTATATCGGTAAGATCGAGCGAGGCGAGCAGCTGCCGTCGTTGAAGATTCTGATCGGCA
TAAGCGAGGCACTCGGTGTGCCCGTGGGCATCTTCTTCGGAGGCGAGTCGGCTGCCGAGGCTGCGCGGCTTCGGGTGGTC
CAGGCCGGTAAGGCGGGGGAGCTGGAGAAGGAACTGCGCGTGCTCCATCCGGACGACCTGCCCCTTGTGGTTGAAATTGT
CCGTCTGCTCAACCGGCATCGGAGGGCGGAACGGAAAAAAGCATATCAAACGCCGGCGGGTTCTCTTCCGCTGGCCGCCG
AGGACGGCCCCTCGTACAGCAAGCCGTAG

Upstream 100 bases:

>100_bases
AAGGGGGTATATCAAACGTGCGTCAGGGTGTGCATAAACCCGCGTCTGGTCGGAATTCTCCGTGGGTTCCAGTACCTGAT
CGAGCCGCTGGGAGTTGCCG

Downstream 100 bases:

>100_bases
AATTTCAGCCCATGACAGCCTCATCAACGTTGAACACCGCAAAAAGCAGGGAGCGCCTCGACAAGCTTCTGGTCGACCGG
GGGCTTGTCCAGTCGCGGGA

Product: Cro/CI family transcriptional regulator

Products: NA

Alternate protein names: Cro/CI Family Transcriptional Regulator; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MNCNIGHALKRLRSERGLTQKDLAALVSGGLDYTYIGKIERGEQLPSLKILIGISEALGVPVGIFFGGESAAEAARLRVV
QAGKAGELEKELRVLHPDDLPLVVEIVRLLNRHRRAERKKAYQTPAGSLPLAAEDGPSYSKP

Sequences:

>Translated_142_residues
MNCNIGHALKRLRSERGLTQKDLAALVSGGLDYTYIGKIERGEQLPSLKILIGISEALGVPVGIFFGGESAAEAARLRVV
QAGKAGELEKELRVLHPDDLPLVVEIVRLLNRHRRAERKKAYQTPAGSLPLAAEDGPSYSKP
>Mature_142_residues
MNCNIGHALKRLRSERGLTQKDLAALVSGGLDYTYIGKIERGEQLPSLKILIGISEALGVPVGIFFGGESAAEAARLRVV
QAGKAGELEKELRVLHPDDLPLVVEIVRLLNRHRRAERKKAYQTPAGSLPLAAEDGPSYSKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15378; Mature: 15378

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCNIGHALKRLRSERGLTQKDLAALVSGGLDYTYIGKIERGEQLPSLKILIGISEALGV
CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECHHHHCC
PVGIFFGGESAAEAARLRVVQAGKAGELEKELRVLHPDDLPLVVEIVRLLNRHRRAERKK
CEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AYQTPAGSLPLAAEDGPSYSKP
HHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNCNIGHALKRLRSERGLTQKDLAALVSGGLDYTYIGKIERGEQLPSLKILIGISEALGV
CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECHHHHCC
PVGIFFGGESAAEAARLRVVQAGKAGELEKELRVLHPDDLPLVVEIVRLLNRHRRAERKK
CEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AYQTPAGSLPLAAEDGPSYSKP
HHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA