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The map label for this gene is ydaA [C]

Identifier: 39996220

GI number: 39996220

Start: 1202650

End: 1203099

Strand: Direct

Name: ydaA [C]

Synonym: GSU1118

Alternate gene names: 39996220

Gene position: 1202650-1203099 (Clockwise)

Preceding gene: 39996219

Following gene: 39996221

Centisome position: 31.53

GC content: 53.78

Gene sequence:

>450_bases
ATGAAGCCGTTCAGCACTATTGTATTTCCGACCGATTTTTCCGAGAACTCGGAGTATGCCTTTGACTATGCCCTTACGCT
TGCCAAGCAGTTCAGTGCCAGGCTTGTTGTCATCCATGTAATCAATGAGCCGGTTGATCTGCGGGGGTTCTATGTCCCCC
ACGTTTCCTTCGAGAAGCTGGAAGAAGAAATCGTGGCGGCCGCCGAAAAGATGATGGACAAATTCTGCCGGACAAAAATC
AAGGACCATGAGAATTACACAAGCTGCATCGTCTCGGGGATTCCCTACGACGAAGTTCTGAAGAAGGCGGCAGAGGAGGA
TGCCTCGCTGATTGTCATGGGAACCCACGGCCGCAAGGGGATCGACCACTTCTTGTTCGGCAGCACGGCAGAACGCGTTG
TTCGCAATGCCAAGTGCCCGGTCATGACCGTGCGCCCGCCCGAAGTCTGA

Upstream 100 bases:

>100_bases
TACATCAACAAGCCGGTAAAACTTGATGAACTCAAGTCGATCCTGACGAAGATCTTCAAGGAAAGCTGTCATTAAACTCT
TCAACGTCAAGGGGGATGAG

Downstream 100 bases:

>100_bases
GACATATCCCTTACAGGGCAACAGACAGGGGCAGCCACCGCGCTGCCCCTCGTTTTTTCTTGCCCGCCGGTCCGTCAGCT
GCTATGACTGCACGACCCGC

Product: universal stress protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKPFSTIVFPTDFSENSEYAFDYALTLAKQFSARLVVIHVINEPVDLRGFYVPHVSFEKLEEEIVAAAEKMMDKFCRTKI
KDHENYTSCIVSGIPYDEVLKKAAEEDASLIVMGTHGRKGIDHFLFGSTAERVVRNAKCPVMTVRPPEV

Sequences:

>Translated_149_residues
MKPFSTIVFPTDFSENSEYAFDYALTLAKQFSARLVVIHVINEPVDLRGFYVPHVSFEKLEEEIVAAAEKMMDKFCRTKI
KDHENYTSCIVSGIPYDEVLKKAAEEDASLIVMGTHGRKGIDHFLFGSTAERVVRNAKCPVMTVRPPEV
>Mature_149_residues
MKPFSTIVFPTDFSENSEYAFDYALTLAKQFSARLVVIHVINEPVDLRGFYVPHVSFEKLEEEIVAAAEKMMDKFCRTKI
KDHENYTSCIVSGIPYDEVLKKAAEEDASLIVMGTHGRKGIDHFLFGSTAERVVRNAKCPVMTVRPPEV

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16848; Mature: 16848

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFSTIVFPTDFSENSEYAFDYALTLAKQFSARLVVIHVINEPVDLRGFYVPHVSFEKL
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEECCCCHHHH
EEEIVAAAEKMMDKFCRTKIKDHENYTSCIVSGIPYDEVLKKAAEEDASLIVMGTHGRKG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCC
IDHFLFGSTAERVVRNAKCPVMTVRPPEV
CHHHHCCCHHHHHHHCCCCCEEECCCCCC
>Mature Secondary Structure
MKPFSTIVFPTDFSENSEYAFDYALTLAKQFSARLVVIHVINEPVDLRGFYVPHVSFEKL
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEECCCCHHHH
EEEIVAAAEKMMDKFCRTKIKDHENYTSCIVSGIPYDEVLKKAAEEDASLIVMGTHGRKG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCC
IDHFLFGSTAERVVRNAKCPVMTVRPPEV
CHHHHCCCHHHHHHHCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]