| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996004
Identifier: 39996004
GI number: 39996004
Start: 964941
End: 966554
Strand: Direct
Name: 39996004
Synonym: GSU0899
Alternate gene names: NA
Gene position: 964941-966554 (Clockwise)
Preceding gene: 39996003
Following gene: 39996006
Centisome position: 25.3
GC content: 69.14
Gene sequence:
>1614_bases TTGCAAGCAGGTAATCCCATGTCGCTCCAAAGCATGCTCCCCTACGTGACGCCGCCGGTGGTGGGCGCCGTCATCGGTTA CGTAACCAACGACATCGCCATCCGGATGCTCTTCCGGCCCCTGAAGCCATGGCGCGTCTTCGGCATCCGCGTCCCCCTCA CTCCGGGGGTCATTCCGGCGGGCCGCCACGAGTTCGCCGCCACCATCGGCCGGATGGTGGGCACCCACCTGGTAACGGGG ACCGACGTGGCCCGGGCTTTGGGCAAGGATTCCTTCCGCCGCGAGCTTCAGGAGGCGGTGAGCGGCAAGCTGGACACCCT GCTGGACAGGGATTTGGGCACGGTGGGCTCCCTCCTGCCGGAAGGGTTTGAGAGCTGGCTCCGTGATGGGGTTGACCTGG CGGCCCGCCGGGCCGGCGAGACCGTTGCCGGATACCTGCAGGGCGAGGATTTTCGCCGGGAGCTGTCCCTGTTTCTCCGC GACCTGGAGGAGCGGGTGCTCCCCCGCGAACTGGAGCGGATCCTCGCGGGGGAGACGGGCGATGCGGTGCGGGCCGGGGC CGGACGCGCGCTGGCGGCGCTGCTCCAGTCGCGGGGGGTGAGCCGGGCCGTGGCCGGGCTGGTGGATGACAAGCTCGACG AACTGCTGGCATCGGAGCGGCCGCTGCGGGAGCTCCTGCCGCCGGAGCTGGTGGAGCTGGCGACGGCCCAGGCCCGGGAG GCGATGCCGGTCATCCTGGGCCGGGTGGCGGAATTCGTCCGTTCCCCGGAGATCCGGGATACCTTCGAGGCCAAGCTGCG GGAGGGGGTTCAGCAGTACCTGGCCAATCTGAAGGGGACCCTGGGCTTCATGGCGGGCTTCATCAGCGTGGAGAAGCTCA ACTCGTACTTCCCCGGCCTGGTGGGGAGCGTGACCGACGAGGTGGTGCGCTGGCTGGGAGAGGAAACGACCCACCGGCGG GTGGCGGCCATGGTGGATCAGGGGCTCGGCCGGATTCTGGACCGACCCCTGGCCGCGACGGTGGAGCAGCTCCCCTATCG CCGCGTGGCGCTCCTGCGCCGGTCGATCCGCCGGGGCGCGCTGGGGGTGGTGCGGCGGCCGGAAACCGCCGGCTTCCTGC TGGCCCTGGCCGAGCGCGAACTGGTGAGGCTGGCGGCTGATCCCTCCCGCCCGATACTGGAACGGCTCGCCCCCGAAGAT GACCCCTCCCGGCTGCGTGAGGGCCTGGTAGGGTGGCTGACGGACAGGCTGCGCGATCCCGGAATCCGTGCAACCCTGGA GCGGATCGTGGCCGGCCGGGTGGAGGAATGGCTCTTCAATCGCCCCCTGGGCCGGCTGTCGGCACGGATCTCGGCCGAGG TCAGGCGCGACCTGGACCAGCTGATCTACCGCCAGGTGGCGGACCTGCTGGAGCGGGAGGCCCCGCCCCTGATCGATGCC CTGGACGTGGCGCGCATGGTTGAGGAGAAGATCAACACCCTGGACATTCTGGCGGTGGAGGGACTGCTCCTCTCCATCAT GCAGAAGCACTTTCTCTACATCAATCTCTTCGGAGCCCTGCTGGGCTTCGTGATGGGGTCTTTCAACGTGCTGCTCATGG GGCTCGGACGGTAG
Upstream 100 bases:
>100_bases GAGTGGGTTCTTTCCCCGTTCCCCATGTTGCGCGGGGCGCTCCGGTGTGCTATTGAACCGGGTGGGCCGACGCCCGAAGC GCTCGCCGTTTCCCATCCCC
Downstream 100 bases:
>100_bases AGGGGCGGCCAGTCGTGCCGGTTTTCAGCGGGAAGCCGCGAGAAACCGGCTCCTGACCAGTTCGAAGTGGTTGTGGTGGG AGCGGAGCTTCCAGTCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MQAGNPMSLQSMLPYVTPPVVGAVIGYVTNDIAIRMLFRPLKPWRVFGIRVPLTPGVIPAGRHEFAATIGRMVGTHLVTG TDVARALGKDSFRRELQEAVSGKLDTLLDRDLGTVGSLLPEGFESWLRDGVDLAARRAGETVAGYLQGEDFRRELSLFLR DLEERVLPRELERILAGETGDAVRAGAGRALAALLQSRGVSRAVAGLVDDKLDELLASERPLRELLPPELVELATAQARE AMPVILGRVAEFVRSPEIRDTFEAKLREGVQQYLANLKGTLGFMAGFISVEKLNSYFPGLVGSVTDEVVRWLGEETTHRR VAAMVDQGLGRILDRPLAATVEQLPYRRVALLRRSIRRGALGVVRRPETAGFLLALAERELVRLAADPSRPILERLAPED DPSRLREGLVGWLTDRLRDPGIRATLERIVAGRVEEWLFNRPLGRLSARISAEVRRDLDQLIYRQVADLLEREAPPLIDA LDVARMVEEKINTLDILAVEGLLLSIMQKHFLYINLFGALLGFVMGSFNVLLMGLGR
Sequences:
>Translated_537_residues MQAGNPMSLQSMLPYVTPPVVGAVIGYVTNDIAIRMLFRPLKPWRVFGIRVPLTPGVIPAGRHEFAATIGRMVGTHLVTG TDVARALGKDSFRRELQEAVSGKLDTLLDRDLGTVGSLLPEGFESWLRDGVDLAARRAGETVAGYLQGEDFRRELSLFLR DLEERVLPRELERILAGETGDAVRAGAGRALAALLQSRGVSRAVAGLVDDKLDELLASERPLRELLPPELVELATAQARE AMPVILGRVAEFVRSPEIRDTFEAKLREGVQQYLANLKGTLGFMAGFISVEKLNSYFPGLVGSVTDEVVRWLGEETTHRR VAAMVDQGLGRILDRPLAATVEQLPYRRVALLRRSIRRGALGVVRRPETAGFLLALAERELVRLAADPSRPILERLAPED DPSRLREGLVGWLTDRLRDPGIRATLERIVAGRVEEWLFNRPLGRLSARISAEVRRDLDQLIYRQVADLLEREAPPLIDA LDVARMVEEKINTLDILAVEGLLLSIMQKHFLYINLFGALLGFVMGSFNVLLMGLGR >Mature_537_residues MQAGNPMSLQSMLPYVTPPVVGAVIGYVTNDIAIRMLFRPLKPWRVFGIRVPLTPGVIPAGRHEFAATIGRMVGTHLVTG TDVARALGKDSFRRELQEAVSGKLDTLLDRDLGTVGSLLPEGFESWLRDGVDLAARRAGETVAGYLQGEDFRRELSLFLR DLEERVLPRELERILAGETGDAVRAGAGRALAALLQSRGVSRAVAGLVDDKLDELLASERPLRELLPPELVELATAQARE AMPVILGRVAEFVRSPEIRDTFEAKLREGVQQYLANLKGTLGFMAGFISVEKLNSYFPGLVGSVTDEVVRWLGEETTHRR VAAMVDQGLGRILDRPLAATVEQLPYRRVALLRRSIRRGALGVVRRPETAGFLLALAERELVRLAADPSRPILERLAPED DPSRLREGLVGWLTDRLRDPGIRATLERIVAGRVEEWLFNRPLGRLSARISAEVRRDLDQLIYRQVADLLEREAPPLIDA LDVARMVEEKINTLDILAVEGLLLSIMQKHFLYINLFGALLGFVMGSFNVLLMGLGR
Specific function: Unknown
COG id: COG4399
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0754 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007383 - InterPro: IPR016991 [H]
Pfam domain/function: PF04286 DUF445 [H]
EC number: NA
Molecular weight: Translated: 59421; Mature: 59421
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAGNPMSLQSMLPYVTPPVVGAVIGYVTNDIAIRMLFRPLKPWRVFGIRVPLTPGVIPA CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC GRHEFAATIGRMVGTHLVTGTDVARALGKDSFRRELQEAVSGKLDTLLDRDLGTVGSLLP CHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EGFESWLRDGVDLAARRAGETVAGYLQGEDFRRELSLFLRDLEERVLPRELERILAGETG HHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DAVRAGAGRALAALLQSRGVSRAVAGLVDDKLDELLASERPLRELLPPELVELATAQARE CHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH AMPVILGRVAEFVRSPEIRDTFEAKLREGVQQYLANLKGTLGFMAGFISVEKLNSYFPGL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH VGSVTDEVVRWLGEETTHRRVAAMVDQGLGRILDRPLAATVEQLPYRRVALLRRSIRRGA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCC LGVVRRPETAGFLLALAERELVRLAADPSRPILERLAPEDDPSRLREGLVGWLTDRLRDP HHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC GIRATLERIVAGRVEEWLFNRPLGRLSARISAEVRRDLDQLIYRQVADLLEREAPPLIDA CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LDVARMVEEKINTLDILAVEGLLLSIMQKHFLYINLFGALLGFVMGSFNVLLMGLGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQAGNPMSLQSMLPYVTPPVVGAVIGYVTNDIAIRMLFRPLKPWRVFGIRVPLTPGVIPA CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC GRHEFAATIGRMVGTHLVTGTDVARALGKDSFRRELQEAVSGKLDTLLDRDLGTVGSLLP CHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EGFESWLRDGVDLAARRAGETVAGYLQGEDFRRELSLFLRDLEERVLPRELERILAGETG HHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DAVRAGAGRALAALLQSRGVSRAVAGLVDDKLDELLASERPLRELLPPELVELATAQARE CHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH AMPVILGRVAEFVRSPEIRDTFEAKLREGVQQYLANLKGTLGFMAGFISVEKLNSYFPGL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH VGSVTDEVVRWLGEETTHRRVAAMVDQGLGRILDRPLAATVEQLPYRRVALLRRSIRRGA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCC LGVVRRPETAGFLLALAERELVRLAADPSRPILERLAPEDDPSRLREGLVGWLTDRLRDP HHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC GIRATLERIVAGRVEEWLFNRPLGRLSARISAEVRRDLDQLIYRQVADLLEREAPPLIDA CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LDVARMVEEKINTLDILAVEGLLLSIMQKHFLYINLFGALLGFVMGSFNVLLMGLGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA