Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39996006

Identifier: 39996006

GI number: 39996006

Start: 967566

End: 968357

Strand: Direct

Name: 39996006

Synonym: GSU0901

Alternate gene names: NA

Gene position: 967566-968357 (Clockwise)

Preceding gene: 39996004

Following gene: 39996016

Centisome position: 25.37

GC content: 68.43

Gene sequence:

>792_bases
GTGGATGGCGGCGAGGAAGGGGTGGAACAGCCCCTCCCGCTCCAGCAGGTGCCGGACCGCGTCCGCCCCCCGGGGGAGCA
GGTCGCTCAGCCGGTGTTCCCGCTCAAGGTGGACGAGGATCGGGAAGCTGCCGTAGAGGGAGAAGGAAAAACGGGCCATG
AGCGTCAGGGCGGCCCGCTGTTCGAGCTCTTCGCCCAGGTCCCGGGTGGCCGCCACGTAGTGCATGGGAAAGGCAACCAC
CGAGCGGTCGAGACTTTCCACGAAGCCTCGTTTTTCCTCGCTGGAGAGTTCCGAGAAGTCCGCCCCGCACCAGCGGCTCT
CCCGGGTGGCCAGAAGCGCCCGACAGGAAAAGGGGCGGACGGCATAGACGCCGCAGGCCCCATCATGATCCAGGAAGGGA
CAGTAGCCCGCCTCCCGCCGATGGAGGCGCAGCCAGCCGGTGAGGTCCCGGGCCCGGGGGAGAAGCTGCCGCAGCCGCGC
CACATGCCCGGCAACGGCCGCTGCCTGGAGATCGCTGATGACGTCCGCGACCCGGACTGCTTCGGTGAAGGTGCAGTTGA
CGGTCAGGGAGCAGCAGGCGCTGCAGCCCCTGCCGCAGTGGACCCGTCCGCCCCCCTCGGCGTAGCCGTCGATCCAGCGC
CGGATCACCCCGTCGAACCGCTCCTGCAGTATCCGCACTTCATCGCACACTTCTCGCCGCATGGAGTCCCCTTAACCGGC
CGGTGTCCCAGCCATTTTCCGGCAAGCTTATCACAGGATCCGCGGCGCGGCGAAGGGGAAATCCCGCGGTGA

Upstream 100 bases:

>100_bases
GTTCCTTGGGAAGGCAGGCGGGACAGATGAGCAGGGGAAGCAGAATGCGTTTCATGGGATACCTCCCGCAGGGGGATGCC
GCTGGGGGGAGTGGTCAATC

Downstream 100 bases:

>100_bases
TCAGGCTGTCGTGAGCCCCAGGGTCTGGATCTGCTCCAGCAGTTTCTCCCGTTCGAGAGGTTTCACGAGATAGGCTTCGC
ACTGGTTGCAGAAGGCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MDGGEEGVEQPLPLQQVPDRVRPPGEQVAQPVFPLKVDEDREAAVEGEGKTGHERQGGPLFELFAQVPGGRHVVHGKGNH
RAVETFHEASFFLAGEFREVRPAPAALPGGQKRPTGKGADGIDAAGPIMIQEGTVARLPPMEAQPAGEVPGPGEKLPQPR
HMPGNGRCLEIADDVRDPDCFGEGAVDGQGAAGAAAPAAVDPSAPLGVAVDPAPDHPVEPLLQYPHFIAHFSPHGVPLTG
RCPSHFPASLSQDPRRGEGEIPR

Sequences:

>Translated_263_residues
MDGGEEGVEQPLPLQQVPDRVRPPGEQVAQPVFPLKVDEDREAAVEGEGKTGHERQGGPLFELFAQVPGGRHVVHGKGNH
RAVETFHEASFFLAGEFREVRPAPAALPGGQKRPTGKGADGIDAAGPIMIQEGTVARLPPMEAQPAGEVPGPGEKLPQPR
HMPGNGRCLEIADDVRDPDCFGEGAVDGQGAAGAAAPAAVDPSAPLGVAVDPAPDHPVEPLLQYPHFIAHFSPHGVPLTG
RCPSHFPASLSQDPRRGEGEIPR
>Mature_263_residues
MDGGEEGVEQPLPLQQVPDRVRPPGEQVAQPVFPLKVDEDREAAVEGEGKTGHERQGGPLFELFAQVPGGRHVVHGKGNH
RAVETFHEASFFLAGEFREVRPAPAALPGGQKRPTGKGADGIDAAGPIMIQEGTVARLPPMEAQPAGEVPGPGEKLPQPR
HMPGNGRCLEIADDVRDPDCFGEGAVDGQGAAGAAAPAAVDPSAPLGVAVDPAPDHPVEPLLQYPHFIAHFSPHGVPLTG
RCPSHFPASLSQDPRRGEGEIPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27551; Mature: 27551

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGGEEGVEQPLPLQQVPDRVRPPGEQVAQPVFPLKVDEDREAAVEGEGKTGHERQGGPL
CCCCHHHHCCCCCHHHCCHHCCCCHHHHHCCCCCEEECCCCHHHCCCCCCCCCCCCCCHH
FELFAQVPGGRHVVHGKGNHRAVETFHEASFFLAGEFREVRPAPAALPGGQKRPTGKGAD
HHHHHHCCCCCEEEECCCCCHHHHHHHHHHEEEECCHHHCCCCCCCCCCCCCCCCCCCCC
GIDAAGPIMIQEGTVARLPPMEAQPAGEVPGPGEKLPQPRHMPGNGRCLEIADDVRDPDC
CCCCCCCEEEECCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCC
FGEGAVDGQGAAGAAAPAAVDPSAPLGVAVDPAPDHPVEPLLQYPHFIAHFSPHGVPLTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHCCHHHHHCCCCCCEECC
RCPSHFPASLSQDPRRGEGEIPR
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDGGEEGVEQPLPLQQVPDRVRPPGEQVAQPVFPLKVDEDREAAVEGEGKTGHERQGGPL
CCCCHHHHCCCCCHHHCCHHCCCCHHHHHCCCCCEEECCCCHHHCCCCCCCCCCCCCCHH
FELFAQVPGGRHVVHGKGNHRAVETFHEASFFLAGEFREVRPAPAALPGGQKRPTGKGAD
HHHHHHCCCCCEEEECCCCCHHHHHHHHHHEEEECCHHHCCCCCCCCCCCCCCCCCCCCC
GIDAAGPIMIQEGTVARLPPMEAQPAGEVPGPGEKLPQPRHMPGNGRCLEIADDVRDPDC
CCCCCCCEEEECCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCC
FGEGAVDGQGAAGAAAPAAVDPSAPLGVAVDPAPDHPVEPLLQYPHFIAHFSPHGVPLTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHCCHHHHHCCCCCCEECC
RCPSHFPASLSQDPRRGEGEIPR
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA