| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995969
Identifier: 39995969
GI number: 39995969
Start: 921967
End: 922218
Strand: Reverse
Name: 39995969
Synonym: GSU0863
Alternate gene names: NA
Gene position: 922218-921967 (Counterclockwise)
Preceding gene: 39995970
Following gene: 39995968
Centisome position: 24.18
GC content: 65.08
Gene sequence:
>252_bases ATGCCACTCTATGAATACCGCTGCGACGCGTGCGACAAGCAGTTCGAGCTGCGTCAGAAATTTTCCGATGCCCCGGCCTC CGAGTGCCCCTCCTGTGGAGGCCCCGTACACAAGCTGATCTCCCAGAGCGGGTTCGCCCTCAAGGGAGGCGGCTGGTATG CTCAGGGTTACAGCTCCGGCGGAGCCGGCAAATCCGAGGCCCCTGCCTGCCCCTCGGGGGGCACGTGCGCAGGATGCCCC TCAGCGGCATAA
Upstream 100 bases:
>100_bases CGCAGTATCCAGCGCGGCGTCGAAAATGCTCCCGTGGGGTTGACAAACCGATGGGGGGATACTTATAGTAAATCGTAACG ATTTTTCAGGAGGTTGTCTC
Downstream 100 bases:
>100_bases GACCGCGCCAACAAGATCCCCTGGCCCTGCCGGGGGATTTTTTTATCCCGCGGGGCCGGTAATCTGACTTTACAACAAGG GCCCCTTTCCGTATCATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: FmdB Family Regulatory Protein; Type I Antifreeze Protein; Cytoplasmic Protein; Regulatory Protein; Regulatory Protein CxxC_CxxC_SSSS Domain-Containing; FmdB Family Protein
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MPLYEYRCDACDKQFELRQKFSDAPASECPSCGGPVHKLISQSGFALKGGGWYAQGYSSGGAGKSEAPACPSGGTCAGCP SAA
Sequences:
>Translated_83_residues MPLYEYRCDACDKQFELRQKFSDAPASECPSCGGPVHKLISQSGFALKGGGWYAQGYSSGGAGKSEAPACPSGGTCAGCP SAA >Mature_82_residues PLYEYRCDACDKQFELRQKFSDAPASECPSCGGPVHKLISQSGFALKGGGWYAQGYSSGGAGKSEAPACPSGGTCAGCPS AA
Specific function: Unknown
COG id: COG2331
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8456; Mature: 8325
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 8.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLYEYRCDACDKQFELRQKFSDAPASECPSCGGPVHKLISQSGFALKGGGWYAQGYSSG CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEECCCCEEECCCCCC GAGKSEAPACPSGGTCAGCPSAA CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLYEYRCDACDKQFELRQKFSDAPASECPSCGGPVHKLISQSGFALKGGGWYAQGYSSG CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEECCCCEEECCCCCC GAGKSEAPACPSGGTCAGCPSAA CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA