| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is folD-2
Identifier: 39995968
GI number: 39995968
Start: 920953
End: 921810
Strand: Reverse
Name: folD-2
Synonym: GSU0862
Alternate gene names: 39995968
Gene position: 921810-920953 (Counterclockwise)
Preceding gene: 39995969
Following gene: 308513290
Centisome position: 24.17
GC content: 62.7
Gene sequence:
>858_bases ATGGCCACAATCATCGACGGAAAAGCCATTGCCGAAAAGATCCGGGCGGACCTCGCCGCCCAGGTGAAAGAACTGCAGTC CAGGGGAATAACCCCCGGCCTCGCCACGGTCCTGGTGGGGAGCGACCCAGCCAGCGAAGTCTACGTCCGGATGAAGGGCG ATGCCTGCAATAAGCTCGGCATGCACTCGGTGAAGATCACGCGCCCCGCGGAAACGACCGAGGAGGAGCTCCTCGCGCTC ATCAACGAACTCAATAACGATCCGGCGATCCACGGCATCCTCGTGCAGCTCCCCCTTCCGCCGCAGATCAACGCGGATCG TGTCCTGGAAGCCATCTCACCCGCCAAGGACGTGGACGGCTTCCATCCTTACAATGTGGGACGCCTGGTGACCGGCAAGC CGACCTTCCAGCCCTGCACCCCCTACGGCGTAATGGTGATGCTGCAAGAAGCGGGAGTCGACTTGGCCGGCAAGGAAGTG GTGGTAGTGGGACGCTCAAACATCGTGGGCAAGCCAGTGGCACTGATGTGCCTTCAGCGCAACGCCACCGTCACCATCTG TCACTCGAAGACCCGCGACCTCCCCGGCCGGGTCAGGGCCGCCGACGTGGTCATCGCCGCAGTCGGGGTCCCCGAGATGA TCAAAGGGGACTGGATTAAGGAAGGAGCGGTTGTCATCGACGTGGGCGTCAACCGGGTGGGAGAAAAGAAACTTGTGGGA GACGTGGAGTTCGCCGCAGCAGCCGAACGGGCTTCGGCCATCACGCCGGTCCCCGGCGGGGTGGGCCCCATGACCATCAC CATGCTTCTTCACAACACCCTTGAGGCCGCAAAAATGGCGGGTTCCGGGAATCGCTAG
Upstream 100 bases:
>100_bases CGGTAATCTGACTTTACAACAAGGGCCCCTTTCCGTATCATTCTGTGGCTGTTCTCACCATTTTTCCCTGCCGGGACGCA CATCCAGAAGGAGCCCACCC
Downstream 100 bases:
>100_bases CCTGGCACCGGAATCACGATGATAGTCAGCAGGCAGAAACCCTTCGCCGATATCCTGGCCGCCTTGGACGGCGTCTCGCG GGTCTTCGTGATCGGCTGCT
Product: folD bifunctional protein
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MATIIDGKAIAEKIRADLAAQVKELQSRGITPGLATVLVGSDPASEVYVRMKGDACNKLGMHSVKITRPAETTEEELLAL INELNNDPAIHGILVQLPLPPQINADRVLEAISPAKDVDGFHPYNVGRLVTGKPTFQPCTPYGVMVMLQEAGVDLAGKEV VVVGRSNIVGKPVALMCLQRNATVTICHSKTRDLPGRVRAADVVIAAVGVPEMIKGDWIKEGAVVIDVGVNRVGEKKLVG DVEFAAAAERASAITPVPGGVGPMTITMLLHNTLEAAKMAGSGNR
Sequences:
>Translated_285_residues MATIIDGKAIAEKIRADLAAQVKELQSRGITPGLATVLVGSDPASEVYVRMKGDACNKLGMHSVKITRPAETTEEELLAL INELNNDPAIHGILVQLPLPPQINADRVLEAISPAKDVDGFHPYNVGRLVTGKPTFQPCTPYGVMVMLQEAGVDLAGKEV VVVGRSNIVGKPVALMCLQRNATVTICHSKTRDLPGRVRAADVVIAAVGVPEMIKGDWIKEGAVVIDVGVNRVGEKKLVG DVEFAAAAERASAITPVPGGVGPMTITMLLHNTLEAAKMAGSGNR >Mature_284_residues ATIIDGKAIAEKIRADLAAQVKELQSRGITPGLATVLVGSDPASEVYVRMKGDACNKLGMHSVKITRPAETTEEELLALI NELNNDPAIHGILVQLPLPPQINADRVLEAISPAKDVDGFHPYNVGRLVTGKPTFQPCTPYGVMVMLQEAGVDLAGKEVV VVGRSNIVGKPVALMCLQRNATVTICHSKTRDLPGRVRAADVVIAAVGVPEMIKGDWIKEGAVVIDVGVNRVGEKKLVGD VEFAAAAERASAITPVPGGVGPMTITMLLHNTLEAAKMAGSGNR
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=289, Percent_Identity=47.7508650519031, Blast_Score=257, Evalue=8e-69, Organism=Homo sapiens, GI222418558, Length=293, Percent_Identity=44.3686006825939, Blast_Score=224, Evalue=5e-59, Organism=Homo sapiens, GI94721354, Length=293, Percent_Identity=46.7576791808874, Blast_Score=224, Evalue=7e-59, Organism=Homo sapiens, GI36796743, Length=202, Percent_Identity=30.6930693069307, Blast_Score=91, Evalue=1e-18, Organism=Escherichia coli, GI1786741, Length=277, Percent_Identity=53.4296028880866, Blast_Score=286, Evalue=1e-78, Organism=Caenorhabditis elegans, GI17568735, Length=298, Percent_Identity=42.2818791946309, Blast_Score=210, Evalue=6e-55, Organism=Saccharomyces cerevisiae, GI6319558, Length=285, Percent_Identity=50.1754385964912, Blast_Score=272, Evalue=4e-74, Organism=Saccharomyces cerevisiae, GI6321643, Length=293, Percent_Identity=46.0750853242321, Blast_Score=254, Evalue=9e-69, Organism=Saccharomyces cerevisiae, GI6322933, Length=321, Percent_Identity=27.1028037383178, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI24645718, Length=287, Percent_Identity=47.7351916376307, Blast_Score=256, Evalue=9e-69, Organism=Drosophila melanogaster, GI17137370, Length=287, Percent_Identity=47.7351916376307, Blast_Score=256, Evalue=9e-69, Organism=Drosophila melanogaster, GI62472483, Length=287, Percent_Identity=47.7351916376307, Blast_Score=256, Evalue=1e-68, Organism=Drosophila melanogaster, GI45551871, Length=287, Percent_Identity=47.7351916376307, Blast_Score=256, Evalue=1e-68, Organism=Drosophila melanogaster, GI17136816, Length=294, Percent_Identity=47.2789115646259, Blast_Score=246, Evalue=1e-65, Organism=Drosophila melanogaster, GI17136818, Length=294, Percent_Identity=47.2789115646259, Blast_Score=246, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD2_GEOSL (Q74EU7)
Other databases:
- EMBL: AE017180 - RefSeq: NP_951919.1 - HSSP: P11586 - ProteinModelPortal: Q74EU7 - SMR: Q74EU7 - GeneID: 2687021 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU0862 - NMPDR: fig|243231.1.peg.857 - TIGR: GSU0862 - HOGENOM: HBG328751 - OMA: LLEHYHI - ProtClustDB: CLSK828063 - BioCyc: GSUL243231:GSU_0862-MONOMER - BRENDA: 1.5.1.5 - BRENDA: 3.5.4.9 - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 29999; Mature: 29868
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIIDGKAIAEKIRADLAAQVKELQSRGITPGLATVLVGSDPASEVYVRMKGDACNKLG CCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCC MHSVKITRPAETTEEELLALINELNNDPAIHGILVQLPLPPQINADRVLEAISPAKDVDG CCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHCCHHHCCC FHPYNVGRLVTGKPTFQPCTPYGVMVMLQEAGVDLAGKEVVVVGRSNIVGKPVALMCLQR CCCCCCCEEEECCCCCCCCCCHHEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEC NATVTICHSKTRDLPGRVRAADVVIAAVGVPEMIKGDWIKEGAVVIDVGVNRVGEKKLVG CCEEEEEECCCCCCCCCEEHHHEEEEECCCCHHHCCCCCCCCCEEEEECCCCCCCHHHCC DVEFAAAAERASAITPVPGGVGPMTITMLLHNTLEAAKMAGSGNR CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ATIIDGKAIAEKIRADLAAQVKELQSRGITPGLATVLVGSDPASEVYVRMKGDACNKLG CEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCC MHSVKITRPAETTEEELLALINELNNDPAIHGILVQLPLPPQINADRVLEAISPAKDVDG CCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHCCHHHCCC FHPYNVGRLVTGKPTFQPCTPYGVMVMLQEAGVDLAGKEVVVVGRSNIVGKPVALMCLQR CCCCCCCEEEECCCCCCCCCCHHEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEC NATVTICHSKTRDLPGRVRAADVVIAAVGVPEMIKGDWIKEGAVVIDVGVNRVGEKKLVG CCEEEEEECCCCCCCCCEEHHHEEEEECCCCHHHCCCCCCCCCEEEEECCCCCCCHHHCC DVEFAAAAERASAITPVPGGVGPMTITMLLHNTLEAAKMAGSGNR CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA