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The map label for this gene is yggU [C]

Identifier: 39995970

GI number: 39995970

Start: 922321

End: 922644

Strand: Reverse

Name: yggU [C]

Synonym: GSU0864

Alternate gene names: 39995970

Gene position: 922644-922321 (Counterclockwise)

Preceding gene: 39995971

Following gene: 39995969

Centisome position: 24.19

GC content: 66.05

Gene sequence:

>324_bases
TTGAGGATGCCTGACCCCCCTTCCCCTGCACCGCGGATTACCGATTCCGCCAACGGCGTCACCTTTTCGGTCCACGTGCA
GCCCCGGGCGTCGCGCAACGAAATCTGCGGCGTCCAGGGGGAAGCAATCAAGCTGCGGCTCACCTCGCCACCGGTGGAGG
GTGAGGCGAACCGCCTCTGCGTCGAATTCCTCGCCAAGCGGCTCGGCGTGCCCAAGTCCTGCGTCGCCATCATAGCCGGC
GAAAAGTCCCGCCACAAAACCATCAGGGTTTCCGGCTCCGACGCAGCCGCCGTGCTGGCCCTGCTCGAAAACAGCCGCCG
GTAG

Upstream 100 bases:

>100_bases
GGGCAGCTTAACGAGCAGCTTCAGGATCTCCGTCGCCAGAAGCTCCAGTTCGAAAGCGCCTTCAAGGCTCTGCTCGACAC
CCACTACAAGATGATCTCAC

Downstream 100 bases:

>100_bases
CCCGCAGTATCCAGCGCGGCGTCGAAAATGCTCCCGTGGGGTTGACAAACCGATGGGGGGATACTTATAGTAAATCGTAA
CGATTTTTCAGGAGGTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRMPDPPSPAPRITDSANGVTFSVHVQPRASRNEICGVQGEAIKLRLTSPPVEGEANRLCVEFLAKRLGVPKSCVAIIAG
EKSRHKTIRVSGSDAAAVLALLENSRR

Sequences:

>Translated_107_residues
MRMPDPPSPAPRITDSANGVTFSVHVQPRASRNEICGVQGEAIKLRLTSPPVEGEANRLCVEFLAKRLGVPKSCVAIIAG
EKSRHKTIRVSGSDAAAVLALLENSRR
>Mature_107_residues
MRMPDPPSPAPRITDSANGVTFSVHVQPRASRNEICGVQGEAIKLRLTSPPVEGEANRLCVEFLAKRLGVPKSCVAIIAG
EKSRHKTIRVSGSDAAAVLALLENSRR

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

Organism=Escherichia coli, GI87082189, Length=78, Percent_Identity=42.3076923076923, Blast_Score=76, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005228
- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 11456; Mature: 11456

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMPDPPSPAPRITDSANGVTFSVHVQPRASRNEICGVQGEAIKLRLTSPPVEGEANRLC
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHH
VEFLAKRLGVPKSCVAIIAGEKSRHKTIRVSGSDAAAVLALLENSRR
HHHHHHHHCCCCHHEEEEECCCCCCEEEEECCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MRMPDPPSPAPRITDSANGVTFSVHVQPRASRNEICGVQGEAIKLRLTSPPVEGEANRLC
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHH
VEFLAKRLGVPKSCVAIIAGEKSRHKTIRVSGSDAAAVLALLENSRR
HHHHHHHHCCCCHHEEEEECCCCCCEEEEECCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA