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The map label for this gene is elbB [H]

Identifier: 39995185

GI number: 39995185

Start: 88132

End: 88785

Strand: Reverse

Name: elbB [H]

Synonym: GSU0074

Alternate gene names: 39995185

Gene position: 88785-88132 (Counterclockwise)

Preceding gene: 39995186

Following gene: 39995184

Centisome position: 2.33

GC content: 62.84

Gene sequence:

>654_bases
ATGAAAAAGATCGGTGTTGTTCTTTCCGGCTGCGGCGTCTATGACGGTAGCGAGATCCACGAGGCGGTCCTGACGCTCCT
CGCCATCGACCGCAACGGTGCCGAGGCGGTCTGCATGGCCCCGAGCATGGAGTTTCGCGAGGTGAACCACCTCACCTCCC
AGGAAACCGGTGCCACCCGCAACGCACTTGTGGAGGCAGCGCGGATCGCCCGGGGTAAGATTCGGGATGTGAAGGATGTG
TCGGCTGTGGAACTCGATGCCGTTATCTTCCCCGGCGGTTACGGCGCGGCAAAGAACCTGTGCACCTTTGCCGAGAAAGG
GGCGGCGGCCACCATCAACCCGGAAGTGGCCCGCCTCATCCGCGAGATGGCCGTGGCCAAAAAACCCATCGGAGCCATCT
GCATCGCCCCGGCCCTTATCGCCGCCACCCTCGGCCGCGACTACAAGCCGAAGGTGACCATTGGCACCGACGCCGGCACC
GCCGCCGCCATTACGGAAACAGGCAGCGAACATGTTTCCTGCCCGGTTGCCGAGTTCGTCGTTGACCGGGAAAACAAAAT
CGTCACCACGCCCGCCTACATGCTCGCCAACCGTATCTCGGAAGCGGCAGAGGGGATCGAAAAAGCGGTCAAGGCCGTCG
TCGAGATGGCCTGA

Upstream 100 bases:

>100_bases
GGAAGATAAGGGGAATGATTACAATTAGTGCCGCTTTAAGCTGCACCCACCGAATATCGTCCCGCATCATTACGATTCCA
GGACAACGAAGGAGGAGCCC

Downstream 100 bases:

>100_bases
TAACTACCGCGGCGCCAAGCGGCGTCGCGATCACGACATGGAGGTTTCTCGACATGAAACGACTTATTGCCCTGCTCTGC
CTGACTCTGACCGTCGCTGC

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKKIGVVLSGCGVYDGSEIHEAVLTLLAIDRNGAEAVCMAPSMEFREVNHLTSQETGATRNALVEAARIARGKIRDVKDV
SAVELDAVIFPGGYGAAKNLCTFAEKGAAATINPEVARLIREMAVAKKPIGAICIAPALIAATLGRDYKPKVTIGTDAGT
AAAITETGSEHVSCPVAEFVVDRENKIVTTPAYMLANRISEAAEGIEKAVKAVVEMA

Sequences:

>Translated_217_residues
MKKIGVVLSGCGVYDGSEIHEAVLTLLAIDRNGAEAVCMAPSMEFREVNHLTSQETGATRNALVEAARIARGKIRDVKDV
SAVELDAVIFPGGYGAAKNLCTFAEKGAAATINPEVARLIREMAVAKKPIGAICIAPALIAATLGRDYKPKVTIGTDAGT
AAAITETGSEHVSCPVAEFVVDRENKIVTTPAYMLANRISEAAEGIEKAVKAVVEMA
>Mature_217_residues
MKKIGVVLSGCGVYDGSEIHEAVLTLLAIDRNGAEAVCMAPSMEFREVNHLTSQETGATRNALVEAARIARGKIRDVKDV
SAVELDAVIFPGGYGAAKNLCTFAEKGAAATINPEVARLIREMAVAKKPIGAICIAPALIAATLGRDYKPKVTIGTDAGT
AAAITETGSEHVSCPVAEFVVDRENKIVTTPAYMLANRISEAAEGIEKAVKAVVEMA

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=225, Percent_Identity=45.3333333333333, Blast_Score=177, Evalue=7e-45,
Organism=Homo sapiens, GI296531408, Length=225, Percent_Identity=39.1111111111111, Blast_Score=136, Evalue=2e-32,
Organism=Escherichia coli, GI87082228, Length=218, Percent_Identity=57.7981651376147, Blast_Score=246, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22681; Mature: 22681

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGVVLSGCGVYDGSEIHEAVLTLLAIDRNGAEAVCMAPSMEFREVNHLTSQETGATR
CCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHH
NALVEAARIARGKIRDVKDVSAVELDAVIFPGGYGAAKNLCTFAEKGAAATINPEVARLI
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEECHHHHHHH
REMAVAKKPIGAICIAPALIAATLGRDYKPKVTIGTDAGTAAAITETGSEHVSCPVAEFV
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCHHHHHH
VDRENKIVTTPAYMLANRISEAAEGIEKAVKAVVEMA
HCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIGVVLSGCGVYDGSEIHEAVLTLLAIDRNGAEAVCMAPSMEFREVNHLTSQETGATR
CCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHH
NALVEAARIARGKIRDVKDVSAVELDAVIFPGGYGAAKNLCTFAEKGAAATINPEVARLI
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEECHHHHHHH
REMAVAKKPIGAICIAPALIAATLGRDYKPKVTIGTDAGTAAAITETGSEHVSCPVAEFV
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCHHHHHH
VDRENKIVTTPAYMLANRISEAAEGIEKAVKAVVEMA
HCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]