Click here to switch to the map view.

The map label for this gene is 39995184

Identifier: 39995184

GI number: 39995184

Start: 87476

End: 88078

Strand: Reverse

Name: 39995184

Synonym: GSU0073

Alternate gene names: NA

Gene position: 88078-87476 (Counterclockwise)

Preceding gene: 39995185

Following gene: 39995183

Centisome position: 2.31

GC content: 60.7

Gene sequence:

>603_bases
ATGAAACGACTTATTGCCCTGCTCTGCCTGACTCTGACCGTCGCTGCCGGCAGCGGTACCGCGTTGGCGGAAAACATCAA
GGGGCGACTCGGGATCACCGGCAAAATCGGCTTTTACCTCCCCGGCGACAGCGATTTCGACAACTACAAACTGGAGACCG
ACGCCGGGTTCCTCGGTGGCGGTGGACTGATCTACGGGGTCACGGACAACCTGGCGGCAGAGGTCGATGTGACCTATACC
AAATTCGGCGCAGAGCTGGTGTCCGGCCTCGACCAGGGCGACTTCTCGGTGACCAACATCGCTATGGGAGTCCAGTACCG
CTTCGACACCCCGCAGCCGAAGCTCTCTCCCTATGCAGGGGGAGGCATCGACATCCTCATCAGCGATTACGATCGCCCGG
GCGGGGCCGATGTGGACCCCACCGTCGGCGTTCACCTCTGCGGCGGACTTGATTACTTCCTGACCAAGCACCTCGTCCTG
AATGCCGAGGTAAGAGGGGTCGTGGCTCCCGAAGTGGACATCGACGCACCGGGGGGAAAATCGGGCAATTTCGATCCCAG
CGGCGTTGCCGCCACCTTCGGTGTCAGACTATTTTTCAACTGA

Upstream 100 bases:

>100_bases
CAGAGGGGATCGAAAAAGCGGTCAAGGCCGTCGTCGAGATGGCCTGATAACTACCGCGGCGCCAAGCGGCGTCGCGATCA
CGACATGGAGGTTTCTCGAC

Downstream 100 bases:

>100_bases
CTCGACGACATGCTCGTCAAAAAAGAGGACGGCTACTGCCGTCCTCTTTTTTTGTCGGCAACGATCCTTATGCTCCTCGC
ATTTTGTCCAACCTGCTCGC

Product: outer membrane protein

Products: NA

Alternate protein names: OmpW Family Protein

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKRLIALLCLTLTVAAGSGTALAENIKGRLGITGKIGFYLPGDSDFDNYKLETDAGFLGGGGLIYGVTDNLAAEVDVTYT
KFGAELVSGLDQGDFSVTNIAMGVQYRFDTPQPKLSPYAGGGIDILISDYDRPGGADVDPTVGVHLCGGLDYFLTKHLVL
NAEVRGVVAPEVDIDAPGGKSGNFDPSGVAATFGVRLFFN

Sequences:

>Translated_200_residues
MKRLIALLCLTLTVAAGSGTALAENIKGRLGITGKIGFYLPGDSDFDNYKLETDAGFLGGGGLIYGVTDNLAAEVDVTYT
KFGAELVSGLDQGDFSVTNIAMGVQYRFDTPQPKLSPYAGGGIDILISDYDRPGGADVDPTVGVHLCGGLDYFLTKHLVL
NAEVRGVVAPEVDIDAPGGKSGNFDPSGVAATFGVRLFFN
>Mature_200_residues
MKRLIALLCLTLTVAAGSGTALAENIKGRLGITGKIGFYLPGDSDFDNYKLETDAGFLGGGGLIYGVTDNLAAEVDVTYT
KFGAELVSGLDQGDFSVTNIAMGVQYRFDTPQPKLSPYAGGGIDILISDYDRPGGADVDPTVGVHLCGGLDYFLTKHLVL
NAEVRGVVAPEVDIDAPGGKSGNFDPSGVAATFGVRLFFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20846; Mature: 20846

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIALLCLTLTVAAGSGTALAENIKGRLGITGKIGFYLPGDSDFDNYKLETDAGFLGG
CHHHHHHHHHHHHHCCCCCCEEHHCCCCEEEEEEEEEEEECCCCCCCCEEEECCCCEEEC
GGLIYGVTDNLAAEVDVTYTKFGAELVSGLDQGDFSVTNIAMGVQYRFDTPQPKLSPYAG
CEEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCC
GGIDILISDYDRPGGADVDPTVGVHLCGGLDYFLTKHLVLNAEVRGVVAPEVDIDAPGGK
CCEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHEEEEEECEECEEECCCCEECCCCCC
SGNFDPSGVAATFGVRLFFN
CCCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MKRLIALLCLTLTVAAGSGTALAENIKGRLGITGKIGFYLPGDSDFDNYKLETDAGFLGG
CHHHHHHHHHHHHHCCCCCCEEHHCCCCEEEEEEEEEEEECCCCCCCCEEEECCCCEEEC
GGLIYGVTDNLAAEVDVTYTKFGAELVSGLDQGDFSVTNIAMGVQYRFDTPQPKLSPYAG
CEEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCC
GGIDILISDYDRPGGADVDPTVGVHLCGGLDYFLTKHLVLNAEVRGVVAPEVDIDAPGGK
CCEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHEEEEEECEECEEECCCCEECCCCCC
SGNFDPSGVAATFGVRLFFN
CCCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA