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The map label for this gene is ybjT [H]

Identifier: 39995186

GI number: 39995186

Start: 88858

End: 89775

Strand: Reverse

Name: ybjT [H]

Synonym: GSU0075

Alternate gene names: 39995186

Gene position: 89775-88858 (Counterclockwise)

Preceding gene: 39995190

Following gene: 39995185

Centisome position: 2.35

GC content: 64.81

Gene sequence:

>918_bases
ATGAACCCCGGAGAAGGGATCGTATTGGTCACCGGTGCAACCGGATTTATCGGCAAGAGGCTCGTGTCGGCCCTACTGGC
CGGCGGCCACCGGGTGCGCTGTCTCGTCCGACGGCCCGATGCCCCGCTTCCCGACGGGGCAGAGCGCGTGGTGGGCGACA
TCCTGACCCGCGAAGGGCTCGATGCCGCCCTGGCGGGGATCGACACCGCCTTCTACCTGGTTCATTCCATGGCCGGCGGC
CGAGCCGGGTTTGAACGGCGGGACCGGGAGGCAGCGGAGCATTTTGTGGCTGCGGGCAACCGGGCGGGCCTGAGGCGGGC
CATCTACCTCGGGGGGCTCGGCGAGACGGGCGATCATCTGTCGGAACACTTGGCGAGCCGCCTCGAAGTAGCCGCCATTC
TGCGGCGGGGCTCATTCCGCACCACGTTCCTGCGGGCAGCCATCATCATCGGTGCCGGTGGCGCTTCCTTCGAAATGATC
CGGGCGCTGGTGGAGCGCCTGCCGGTCATGATCACTCCCCGGTGGGTCTCCACGCGCTGCCAGCCAATCGCCGTGGGGGA
CGTCATCAGCTACCTGACCGGCTGCCTGGAGGACGAGCGGACCACGGGCGAAACCTTCGACATCGGCGGCCCCGACATCC
TCACCTATCGAGAGATGATGGAACGGCTCGCAGGGGTGGAGAAAACATTCACCATGATCCTGTCAGTGCCGGTGCTGACG
CCCAGACTTTCGTCCTACTGGGTGGGTCTTGTCACGCCGGTACGACCCTCTATCGCCATTCCGCTCATCGAGGGGTTGAA
AAATGAGGTCGTCTGCCGCGAAAACCGGATTCGCGACTTCATCCCCTTCCCGCTCACCACCTACGAGCGGGCCGTGACGA
TCGCGCTTGCGGAAGATAAGGGGAATGATTACAATTAG

Upstream 100 bases:

>100_bases
GCCACAACCATACCACAGCCGCCTGCCCTTGTCTTACGGCAGAAGCGTGTACAATAGGTAGATAGATAGATTTTCGCCGC
CATCTGCCCAGGAGGAATTT

Downstream 100 bases:

>100_bases
TGCCGCTTTAAGCTGCACCCACCGAATATCGTCCCGCATCATTACGATTCCAGGACAACGAAGGAGGAGCCCATGAAAAA
GATCGGTGTTGTTCTTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MNPGEGIVLVTGATGFIGKRLVSALLAGGHRVRCLVRRPDAPLPDGAERVVGDILTREGLDAALAGIDTAFYLVHSMAGG
RAGFERRDREAAEHFVAAGNRAGLRRAIYLGGLGETGDHLSEHLASRLEVAAILRRGSFRTTFLRAAIIIGAGGASFEMI
RALVERLPVMITPRWVSTRCQPIAVGDVISYLTGCLEDERTTGETFDIGGPDILTYREMMERLAGVEKTFTMILSVPVLT
PRLSSYWVGLVTPVRPSIAIPLIEGLKNEVVCRENRIRDFIPFPLTTYERAVTIALAEDKGNDYN

Sequences:

>Translated_305_residues
MNPGEGIVLVTGATGFIGKRLVSALLAGGHRVRCLVRRPDAPLPDGAERVVGDILTREGLDAALAGIDTAFYLVHSMAGG
RAGFERRDREAAEHFVAAGNRAGLRRAIYLGGLGETGDHLSEHLASRLEVAAILRRGSFRTTFLRAAIIIGAGGASFEMI
RALVERLPVMITPRWVSTRCQPIAVGDVISYLTGCLEDERTTGETFDIGGPDILTYREMMERLAGVEKTFTMILSVPVLT
PRLSSYWVGLVTPVRPSIAIPLIEGLKNEVVCRENRIRDFIPFPLTTYERAVTIALAEDKGNDYN
>Mature_305_residues
MNPGEGIVLVTGATGFIGKRLVSALLAGGHRVRCLVRRPDAPLPDGAERVVGDILTREGLDAALAGIDTAFYLVHSMAGG
RAGFERRDREAAEHFVAAGNRAGLRRAIYLGGLGETGDHLSEHLASRLEVAAILRRGSFRTTFLRAAIIIGAGGASFEMI
RALVERLPVMITPRWVSTRCQPIAVGDVISYLTGCLEDERTTGETFDIGGPDILTYREMMERLAGVEKTFTMILSVPVLT
PRLSSYWVGLVTPVRPSIAIPLIEGLKNEVVCRENRIRDFIPFPLTTYERAVTIALAEDKGNDYN

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=297, Percent_Identity=33.3333333333333, Blast_Score=168, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33145; Mature: 33145

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPGEGIVLVTGATGFIGKRLVSALLAGGHRVRCLVRRPDAPLPDGAERVVGDILTREGL
CCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCH
DAALAGIDTAFYLVHSMAGGRAGFERRDREAAEHFVAAGNRAGLRRAIYLGGLGETGDHL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCHHHH
SEHLASRLEVAAILRRGSFRTTFLRAAIIIGAGGASFEMIRALVERLPVMITPRWVSTRC
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHCCEEECCHHHCCCC
QPIAVGDVISYLTGCLEDERTTGETFDIGGPDILTYREMMERLAGVEKTFTMILSVPVLT
CEEHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCC
PRLSSYWVGLVTPVRPSIAIPLIEGLKNEVVCRENRIRDFIPFPLTTYERAVTIALAEDK
CCHHHHHEEEECCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEECC
GNDYN
CCCCC
>Mature Secondary Structure
MNPGEGIVLVTGATGFIGKRLVSALLAGGHRVRCLVRRPDAPLPDGAERVVGDILTREGL
CCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCH
DAALAGIDTAFYLVHSMAGGRAGFERRDREAAEHFVAAGNRAGLRRAIYLGGLGETGDHL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCHHHH
SEHLASRLEVAAILRRGSFRTTFLRAAIIIGAGGASFEMIRALVERLPVMITPRWVSTRC
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHCCEEECCHHHCCCC
QPIAVGDVISYLTGCLEDERTTGETFDIGGPDILTYREMMERLAGVEKTFTMILSVPVLT
CEEHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCC
PRLSSYWVGLVTPVRPSIAIPLIEGLKNEVVCRENRIRDFIPFPLTTYERAVTIALAEDK
CCHHHHHEEEECCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEECC
GNDYN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]