Click here to switch to the map view.

The map label for this gene is yraN [C]

Identifier: 57234416

GI number: 57234416

Start: 718422

End: 718787

Strand: Direct

Name: yraN [C]

Synonym: DET0781

Alternate gene names: 57234416

Gene position: 718422-718787 (Clockwise)

Preceding gene: 57234417

Following gene: 57234415

Centisome position: 48.88

GC content: 47.54

Gene sequence:

>366_bases
ATGTCATATAAGCGTAAAGAAACAGGTAAGCTGGGTGAGGAACTGGCAGCAGAGTACCTGAAGGGTATGGGATACCGCAT
TATCCAGACCAACTGCCGTTTGCCTGAGGGTGAAATTGATATAGTGGGGCAGGACGGTGAGTGTCTGGCATTTATTGAGG
TGCGCACCAAACGCCGCTTGGAATACGGTTTGCCTGCCGAATCTATTACCCTGCGTAAAAAAGCCCATCTTATTGCCAGT
GCCGAAAGCTATATGCAAAAATACCATCTGGAACACCTGCCCTGCCGGATAGACTTCGTTTCAGTAGACCTTAGCCAGCC
TGAACCTAAACTGGAACTTATTAAAAACGCACTGGGTGAAGAATAA

Upstream 100 bases:

>100_bases
CACAAGGGGTATGGCACGGCGCTTCATATGGAGTGCATTTCCCAAAAAGGTATCTCCCCCATCCACCGCCGCACTTTTGC
CCCTTTAAAGAGTATGTTTG

Downstream 100 bases:

>100_bases
AGACGAAAGATACGGGTTTGTGTTAAAATCTTGGCGTGGATAATCTTGATAAACTGTGGCGGATAGTTGATGTCAACCAG
AACCGCTTAAGCGAAGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSYKRKETGKLGEELAAEYLKGMGYRIIQTNCRLPEGEIDIVGQDGECLAFIEVRTKRRLEYGLPAESITLRKKAHLIAS
AESYMQKYHLEHLPCRIDFVSVDLSQPEPKLELIKNALGEE

Sequences:

>Translated_121_residues
MSYKRKETGKLGEELAAEYLKGMGYRIIQTNCRLPEGEIDIVGQDGECLAFIEVRTKRRLEYGLPAESITLRKKAHLIAS
AESYMQKYHLEHLPCRIDFVSVDLSQPEPKLELIKNALGEE
>Mature_120_residues
SYKRKETGKLGEELAAEYLKGMGYRIIQTNCRLPEGEIDIVGQDGECLAFIEVRTKRRLEYGLPAESITLRKKAHLIASA
ESYMQKYHLEHLPCRIDFVSVDLSQPEPKLELIKNALGEE

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=117, Percent_Identity=31.6239316239316, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y781_DEHE1 (Q3Z8D6)

Other databases:

- EMBL:   CP000027
- RefSeq:   YP_181513.1
- STRING:   Q3Z8D6
- GeneID:   3229883
- GenomeReviews:   CP000027_GR
- KEGG:   det:DET0781
- TIGR:   DET0781
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   KQRQISK
- PhylomeDB:   Q3Z8D6
- ProtClustDB:   PRK14688
- BioCyc:   DETH243164:DET_0781-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13811; Mature: 13680

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKRKETGKLGEELAAEYLKGMGYRIIQTNCRLPEGEIDIVGQDGECLAFIEVRTKRRL
CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCEEEEEEEHHHHHH
EYGLPAESITLRKKAHLIASAESYMQKYHLEHLPCRIDFVSVDLSQPEPKLELIKNALGE
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHCC
E
C
>Mature Secondary Structure 
SYKRKETGKLGEELAAEYLKGMGYRIIQTNCRLPEGEIDIVGQDGECLAFIEVRTKRRL
CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCEEEEEEEHHHHHH
EYGLPAESITLRKKAHLIASAESYMQKYHLEHLPCRIDFVSVDLSQPEPKLELIKNALGE
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA