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The map label for this gene is 57234058

Identifier: 57234058

GI number: 57234058

Start: 1040057

End: 1040878

Strand: Direct

Name: 57234058

Synonym: DET1137

Alternate gene names: NA

Gene position: 1040057-1040878 (Clockwise)

Preceding gene: 57234060

Following gene: 57234057

Centisome position: 70.77

GC content: 46.11

Gene sequence:

>822_bases
ATGACTGCAAATTCTCATACCCCGCGCATTATGCCTGACCGCCAAGCCAACCCGGATATGACAAATGTCTATCATATAGC
TTATGCACCGGGTATTAAAAAAGCGTATCTGTTTCACTGGAATTGCAATCTAAAATGCCGCGGCTGTCTTTGTAAAAAGG
AAATCAACTGCCTGGCTCTGGAAGAAAATCTGGATGTAGTTGCCCGTGACCCTCATCTAGCCCCGCCCCGTGGTCCTGAA
TCGTTCCTTAGCCTGAACGGAATTATGGAAACACTGCGCAAAGTGGAGCTCAAAGAGGTTCTGTTTGAAGGTCAGGAAGC
CACCATAGACCCCCATTTTGCCGAAATATGCCGCCGTCTCAAAGCTGAGTTTGGTGTTTATATAACCTTAAATACCAACG
GGCTGAAACTACCTGACCTTTCCAACGTAGATGAAGTAGTTTTCAGCCTGAAGGCAGTTACCCCGGAACTCTATCTGGAC
TATACCGAAGTACCCAATACCAGAATGCTGGAAAATTTTGAAAATATTTTCCGTTCAGGCAAGAAACTGCGGGCTGAAAT
GGTATTTATCCCCGGCTATATAGATATAGCTGAAACAGAGGTCATTGCCAAACATATTGCCAGTCTCAGCCGGGATATTC
CCCTCAGGATAGACGCCTATTTTGAATGCGGTGATAATACCTGGCGGAGAGCCACCCCGGAAGAAATGCGTCAGGCAGTA
GCTGCGGCCAAAAAACACCTTAATACCGTGACCTGCACCCAGCAAACTACCGACAATCTGGATAAAAAAGACCTTTTCTT
TGAGGTAAAACGGCTATTCTAA

Upstream 100 bases:

>100_bases
AAAAAATCATTTCTAAATTGTACATTTTTAAAATTCCTGAGCCGTTTTGCCAGAATGTTGTGTTATAATGGTAGATAATT
TTTTATAGGGATATACACTT

Downstream 100 bases:

>100_bases
TTAGTCAGTCAACTCTAAAAACACTAACTCTATTTTATTTTTAGATAATTGTGGAAACTGTATATATAATTGTGCTTGCC
CTTGCCTTAGACCTGTTACT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTANSHTPRIMPDRQANPDMTNVYHIAYAPGIKKAYLFHWNCNLKCRGCLCKKEINCLALEENLDVVARDPHLAPPRGPE
SFLSLNGIMETLRKVELKEVLFEGQEATIDPHFAEICRRLKAEFGVYITLNTNGLKLPDLSNVDEVVFSLKAVTPELYLD
YTEVPNTRMLENFENIFRSGKKLRAEMVFIPGYIDIAETEVIAKHIASLSRDIPLRIDAYFECGDNTWRRATPEEMRQAV
AAAKKHLNTVTCTQQTTDNLDKKDLFFEVKRLF

Sequences:

>Translated_273_residues
MTANSHTPRIMPDRQANPDMTNVYHIAYAPGIKKAYLFHWNCNLKCRGCLCKKEINCLALEENLDVVARDPHLAPPRGPE
SFLSLNGIMETLRKVELKEVLFEGQEATIDPHFAEICRRLKAEFGVYITLNTNGLKLPDLSNVDEVVFSLKAVTPELYLD
YTEVPNTRMLENFENIFRSGKKLRAEMVFIPGYIDIAETEVIAKHIASLSRDIPLRIDAYFECGDNTWRRATPEEMRQAV
AAAKKHLNTVTCTQQTTDNLDKKDLFFEVKRLF
>Mature_272_residues
TANSHTPRIMPDRQANPDMTNVYHIAYAPGIKKAYLFHWNCNLKCRGCLCKKEINCLALEENLDVVARDPHLAPPRGPES
FLSLNGIMETLRKVELKEVLFEGQEATIDPHFAEICRRLKAEFGVYITLNTNGLKLPDLSNVDEVVFSLKAVTPELYLDY
TEVPNTRMLENFENIFRSGKKLRAEMVFIPGYIDIAETEVIAKHIASLSRDIPLRIDAYFECGDNTWRRATPEEMRQAVA
AAKKHLNTVTCTQQTTDNLDKKDLFFEVKRLF

Specific function: Unknown

COG id: COG2896

COG function: function code H; Molybdenum cofactor biosynthesis enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the organic radical-activating enzymes family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 31224; Mature: 31093

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANSHTPRIMPDRQANPDMTNVYHIAYAPGIKKAYLFHWNCNLKCRGCLCKKEINCLAL
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEECCCCCCCCCCEEEE
EENLDVVARDPHLAPPRGPESFLSLNGIMETLRKVELKEVLFEGQEATIDPHFAEICRRL
ECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
KAEFGVYITLNTNGLKLPDLSNVDEVVFSLKAVTPELYLDYTEVPNTRMLENFENIFRSG
HHHCCEEEEECCCCEECCCCCCHHHHHHHHHHCCHHHEEECCCCCCHHHHHHHHHHHHCC
KKLRAEMVFIPGYIDIAETEVIAKHIASLSRDIPLRIDAYFECGDNTWRRATPEEMRQAV
HHEEEEEEEECCEECHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHH
AAAKKHLNTVTCTQQTTDNLDKKDLFFEVKRLF
HHHHHHCCEEEECCHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TANSHTPRIMPDRQANPDMTNVYHIAYAPGIKKAYLFHWNCNLKCRGCLCKKEINCLAL
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEECCCCCCCCCCEEEE
EENLDVVARDPHLAPPRGPESFLSLNGIMETLRKVELKEVLFEGQEATIDPHFAEICRRL
ECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
KAEFGVYITLNTNGLKLPDLSNVDEVVFSLKAVTPELYLDYTEVPNTRMLENFENIFRSG
HHHCCEEEEECCCCEECCCCCCHHHHHHHHHHCCHHHEEECCCCCCHHHHHHHHHHHHCC
KKLRAEMVFIPGYIDIAETEVIAKHIASLSRDIPLRIDAYFECGDNTWRRATPEEMRQAV
HHEEEEEEEECCEECHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHH
AAAKKHLNTVTCTQQTTDNLDKKDLFFEVKRLF
HHHHHHCCEEEECCHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]