| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is acpP
Identifier: 57233931
GI number: 57233931
Start: 1164489
End: 1164749
Strand: Direct
Name: acpP
Synonym: DET1279
Alternate gene names: 57233931
Gene position: 1164489-1164749 (Clockwise)
Preceding gene: 57233932
Following gene: 57233928
Centisome position: 79.23
GC content: 44.83
Gene sequence:
>261_bases GTGGCAACGGTTTTTGAAAGAGTAAAAAAAGTTAGTGTTGAGCAGCTGGGCGCTGAAGAAAAAGATGTAGTGCCTGCTGC CAGTTTTGCAGATGATTTGGGTGCAGATTCCCTGGATCAGGTAGAGCTTATTATGGCACTGGAAACCGAATTCGGTACAC CTGATGCCAAGTTTGAAATACCTGATACTGACGCCGAAAAGTTAAAGACAGTACAGGCTGTGGTGGACTACCTGAAGTCC AAAGGCATAAAAGACAGCTAA
Upstream 100 bases:
>100_bases TCATTTGGGGGCAACTCGTCTGCCAGATTTATAAACGGGGTTCTAAGTTCTGTCAGCAAAGCGCTGGCGGACACAGCAAA GCAACGGGAGGAGTGAAGGA
Downstream 100 bases:
>100_bases TACCGCCTTTAAAACCACCATATTCAAAAGGGTTTTAAAACAGCTGAAATCCGGCTCGGGCATTTTATTGCCTTTTAATC CGTTATTTTTATATCTCGGA
Product: acyl carrier protein
Products: NA
Alternate protein names: ACP
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MATVFERVKKVSVEQLGAEEKDVVPAASFADDLGADSLDQVELIMALETEFGTPDAKFEIPDTDAEKLKTVQAVVDYLKS KGIKDS
Sequences:
>Translated_86_residues MATVFERVKKVSVEQLGAEEKDVVPAASFADDLGADSLDQVELIMALETEFGTPDAKFEIPDTDAEKLKTVQAVVDYLKS KGIKDS >Mature_85_residues ATVFERVKKVSVEQLGAEEKDVVPAASFADDLGADSLDQVELIMALETEFGTPDAKFEIPDTDAEKLKTVQAVVDYLKSK GIKDS
Specific function: Carrier of the growing fatty acid chain in fatty acid biosynthesis
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain
Homologues:
Organism=Homo sapiens, GI4826852, Length=55, Percent_Identity=60, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787336, Length=81, Percent_Identity=56.7901234567901, Blast_Score=89, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACP_DEHE1 (Q3Z708)
Other databases:
- EMBL: CP000027 - RefSeq: YP_181991.1 - HSSP: Q5SL79 - ProteinModelPortal: Q3Z708 - SMR: Q3Z708 - STRING: Q3Z708 - GeneID: 3229396 - GenomeReviews: CP000027_GR - KEGG: det:DET1279 - NMPDR: fig|243164.3.peg.1271 - TIGR: DET1279 - eggNOG: COG0236 - HOGENOM: HBG755218 - OMA: IDYVNSH - PhylomeDB: Q3Z708 - ProtClustDB: PRK00982 - BioCyc: DETH243164:DET_1279-MONOMER - GO: GO:0005737 - HAMAP: MF_01217 - InterPro: IPR003231 - InterPro: IPR009081 - InterPro: IPR006163 - InterPro: IPR006162 - Gene3D: G3DSA:1.10.1200.10 - TIGRFAMs: TIGR00517
Pfam domain/function: PF00550 PP-binding; SSF47336 ACP_like
EC number: NA
Molecular weight: Translated: 9334; Mature: 9202
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: PS50075 ACP_DOMAIN; PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVFERVKKVSVEQLGAEEKDVVPAASFADDLGADSLDQVELIMALETEFGTPDAKFEI CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEC PDTDAEKLKTVQAVVDYLKSKGIKDS CCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ATVFERVKKVSVEQLGAEEKDVVPAASFADDLGADSLDQVELIMALETEFGTPDAKFEI CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEC PDTDAEKLKTVQAVVDYLKSKGIKDS CCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA