| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57233901
Identifier: 57233901
GI number: 57233901
Start: 1180817
End: 1181926
Strand: Direct
Name: 57233901
Synonym: DET1295
Alternate gene names: NA
Gene position: 1180817-1181926 (Clockwise)
Preceding gene: 57235102
Following gene: 57233898
Centisome position: 80.34
GC content: 47.21
Gene sequence:
>1110_bases GTGATTCGTAATATTACAATAAGCCAGACTACTAAAGCTATTTTCCGCTGGGGAATTATACTCGCAAGCATAGCTCTGCT CGGGTTGCCCATGATAATCAGCGCCGCCATTGTCCCGTACGTAAATTCAAGCCTGGTAGCCCAGTATCAGGTAGGCAACA TTCAGGGGCAGATAACCTTTAATCAGGCGGGCAAAGACCCCGAGGTTCTGGATATTTCAATCTGGTATCCCACCACCGGC CAGGGTTCTTTCTCTTTTGAGGGATTTGACGGCACACTGGCAGATTTCAGCGGCGGGCCGTATCCGCTTATTATTTTTAA TCACGGACTGAACGCTAATGACATTGATCCCCTTTATCTTAAGGAAAGTCTGGTGGGACAGGGATATGTGGTGGCATCAG TAGAGTTTAATGACATGCCGTCAATAATTTTTTCAGATTATATCTCCACTACCCCCAGAACAGACTGGGATAACCGTACT GATAACCTTTTTTCAGCAGTAGACAATTTTTTCCGTGATAATTACCTTAACTATCTGGAAAATTACCGCATAAACCAGTC CCGTTTCAGTCTGGATTATGTACTGAATATGAATAAAAATCCGTCTTCGCCTTTTTACGGGCTGATAGATGCAGATAAAA TAGGCATGGCCGGGCATTCACTGGGGGGGCTGACCACGCTCTCTCTTAGCGGTGCCCACCCTGACCCGGCGGTGGCTGAT CCGCGGATAAAAGCCATAATCCTGCTGGCCACACCGGCTTATCCCTTTGAGAACAATTTGGACAATGTGAATATTCCGGT TATGGTTATGCGGGGGGATTATGACCTGATGATGACCAGTGCCGAAGATGACCTCTGGGTAACTGACCAGGGGCTTAGCG CACCTAAATTCTTTCTGGTGGTCAGCCAGTCCCATCACTTTACCTTCAGCCAGTCACCTTACAGCATTTCAGACCCGCTG CCGCATGTAAACCATGACGGGCGGATTGAAGTCATTATGACTTACAGTCTGGCTTTTATGAACTACTATCTGAAGGGTGA TGCAGATGCCCTTAAGGTACTGGAAAACCAGGACCCCATGCTGGCCCAATATTATTACGAACTGGAATAG
Upstream 100 bases:
>100_bases AGGGTCAGTGTGTTATTATTGTAATCCAGTAAGGTATTTTAAAATAATATCCACCTGAGATACAAGTTAGATACACTGAT AAAGGCAGGGTTTAGTTAGG
Downstream 100 bases:
>100_bases GTTTTCTATTCCTGCCTTTAAAAAAACCTCCGGGGATAAATAAAAAGCCCTGCTTTTAAAAGCAGGGCTTTGTTTAGTTT CTTAAACTAGTGCCTATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MIRNITISQTTKAIFRWGIILASIALLGLPMIISAAIVPYVNSSLVAQYQVGNIQGQITFNQAGKDPEVLDISIWYPTTG QGSFSFEGFDGTLADFSGGPYPLIIFNHGLNANDIDPLYLKESLVGQGYVVASVEFNDMPSIIFSDYISTTPRTDWDNRT DNLFSAVDNFFRDNYLNYLENYRINQSRFSLDYVLNMNKNPSSPFYGLIDADKIGMAGHSLGGLTTLSLSGAHPDPAVAD PRIKAIILLATPAYPFENNLDNVNIPVMVMRGDYDLMMTSAEDDLWVTDQGLSAPKFFLVVSQSHHFTFSQSPYSISDPL PHVNHDGRIEVIMTYSLAFMNYYLKGDADALKVLENQDPMLAQYYYELE
Sequences:
>Translated_369_residues MIRNITISQTTKAIFRWGIILASIALLGLPMIISAAIVPYVNSSLVAQYQVGNIQGQITFNQAGKDPEVLDISIWYPTTG QGSFSFEGFDGTLADFSGGPYPLIIFNHGLNANDIDPLYLKESLVGQGYVVASVEFNDMPSIIFSDYISTTPRTDWDNRT DNLFSAVDNFFRDNYLNYLENYRINQSRFSLDYVLNMNKNPSSPFYGLIDADKIGMAGHSLGGLTTLSLSGAHPDPAVAD PRIKAIILLATPAYPFENNLDNVNIPVMVMRGDYDLMMTSAEDDLWVTDQGLSAPKFFLVVSQSHHFTFSQSPYSISDPL PHVNHDGRIEVIMTYSLAFMNYYLKGDADALKVLENQDPMLAQYYYELE >Mature_369_residues MIRNITISQTTKAIFRWGIILASIALLGLPMIISAAIVPYVNSSLVAQYQVGNIQGQITFNQAGKDPEVLDISIWYPTTG QGSFSFEGFDGTLADFSGGPYPLIIFNHGLNANDIDPLYLKESLVGQGYVVASVEFNDMPSIIFSDYISTTPRTDWDNRT DNLFSAVDNFFRDNYLNYLENYRINQSRFSLDYVLNMNKNPSSPFYGLIDADKIGMAGHSLGGLTTLSLSGAHPDPAVAD PRIKAIILLATPAYPFENNLDNVNIPVMVMRGDYDLMMTSAEDDLWVTDQGLSAPKFFLVVSQSHHFTFSQSPYSISDPL PHVNHDGRIEVIMTYSLAFMNYYLKGDADALKVLENQDPMLAQYYYELE
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41140; Mature: 41140
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRNITISQTTKAIFRWGIILASIALLGLPMIISAAIVPYVNSSLVAQYQVGNIQGQITF CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEE NQAGKDPEVLDISIWYPTTGQGSFSFEGFDGTLADFSGGPYPLIIFNHGLNANDIDPLYL CCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHH KESLVGQGYVVASVEFNDMPSIIFSDYISTTPRTDWDNRTDNLFSAVDNFFRDNYLNYLE HHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NYRINQSRFSLDYVLNMNKNPSSPFYGLIDADKIGMAGHSLGGLTTLSLSGAHPDPAVAD HCCCCCHHEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCC PRIKAIILLATPAYPFENNLDNVNIPVMVMRGDYDLMMTSAEDDLWVTDQGLSAPKFFLV CCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEECCCCCCCEEEEE VSQSHHFTFSQSPYSISDPLPHVNHDGRIEVIMTYSLAFMNYYLKGDADALKVLENQDPM EECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHCCCCCE LAQYYYELE EEEEEEECC >Mature Secondary Structure MIRNITISQTTKAIFRWGIILASIALLGLPMIISAAIVPYVNSSLVAQYQVGNIQGQITF CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEE NQAGKDPEVLDISIWYPTTGQGSFSFEGFDGTLADFSGGPYPLIIFNHGLNANDIDPLYL CCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHH KESLVGQGYVVASVEFNDMPSIIFSDYISTTPRTDWDNRTDNLFSAVDNFFRDNYLNYLE HHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NYRINQSRFSLDYVLNMNKNPSSPFYGLIDADKIGMAGHSLGGLTTLSLSGAHPDPAVAD HCCCCCHHEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCC PRIKAIILLATPAYPFENNLDNVNIPVMVMRGDYDLMMTSAEDDLWVTDQGLSAPKFFLV CCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEECCCCCCCEEEEE VSQSHHFTFSQSPYSISDPLPHVNHDGRIEVIMTYSLAFMNYYLKGDADALKVLENQDPM EECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHCCCCCE LAQYYYELE EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA