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The map label for this gene is 38234800

Identifier: 38234800

GI number: 38234800

Start: 2356239

End: 2357810

Strand: Reverse

Name: 38234800

Synonym: DIP2264

Alternate gene names: NA

Gene position: 2357810-2356239 (Counterclockwise)

Preceding gene: 38234803

Following gene: 38234799

Centisome position: 94.74

GC content: 61.01

Gene sequence:

>1572_bases
GTGGAAACTGATACGCACTTGCAACCTTCCGACCTAGTCGGTTGCCGCTACCGCCAAGTGCAGCGGAGGCGCTTCCCAAA
CGTATCGGCAACTGAAAACTCCCAGCTCAGGCGCGAACGCCTCCTCGACGCCCGCCGAGCCGTCTTCGATCTGTTGCCCA
CCAAGCCACAAATCGGGGACCCCCAGCACTTCCTGCGCCTCGACCTTCGCCCCGATTACCCAGCCCGTGTAAACCACGAG
GATGTGTGGCAGACGTATCTGCAGACGCTGGAAGCTATCGCCGATCAAGCCAACATTATTACCGGCGCAGTTCTCATCGG
TGAAAGCGAGGGGATTGCGTGGCACACAGAACTCGACGCCCTTATCCGACGCCCTGACGGCTGCTACCTGCCCCTGCTCG
TGTCTAACCATCGCGTCGCGCGCCCAGCTCGAAATGCCGCCGACCAAGCCAAAACAGTTCGGATGATTGCCACGGCCCGC
CTAGGGCTGGGGCAGGCATATAAGGTGGCCACCAAACTCAAGCATCATTCCATTGACTCGTTCACGCTGGGCCTTGCTGC
CCAGGCGCTCGATAGCCTCGGGGTGGGGTGCCGGCGGGCTCTTATTATTGGGCAAAGCAGTGAGCAGGCGTTTGTGCTCA
ATACTGATTATTTTCAGCAGGGGCTCACTAATGCGTTGCGCGCTACGATTCCAGACCTGCCGCGCCGAGTAAAGGAGTGC
GCTAGCTGCCGGTTTGTTGACTTGTGCGGTGAGCAGTTGCGGGAGCGTGATGACCTGAGTTTGTTCCTCAGTGGCGATCG
CGCTAATCCCTTCCGCGAGCGGGGGATCGACACGGTCCAAGGGCTTATCGACGCCCGCCTCGGGCGCCCTTCCGAGCTTG
CGGCGGCATGGCGCGCCCACATCCCTGTTCTTGCTGTGACTGAACACGTAGACCACGAGCGCTTTGACGTAGAGATCGAC
ATCGACGTTGAGGCCTACCTCGACCATGGTGCCTATCTGTGGGGTGCCTACGACGGCGATACATACCATCCGTTTGTGAC
CTGGGAGCCTCTTGGTGGGCAGGCGGAAGGAGAAAACTTCGCGCGATTCTGGGCGTGGTTGATGGGGCGTCGATACGCCG
CCGAGCAGGCCGGACAGACCTTCGGGGCGTTTTGCTACTCCGCGCACGGCGAAAACCACTGGCTGCGCTTCAGTGCGCGC
CGGTTCCACGGCAAAGTTGAAGGAGTGCCCAGCGAGGCCGAGGTGCTCGCCTTTATCCAATCGGGGCAATGGCACGACGT
GTTCGTGGCCGTCAAGAATAATCTTGTGGGCCCTGAAGGGCTAGGGCTGAAGGTCGTGGCCCCCGCCGCGGGGTTTAGTT
GGGAGGCGAACGACGTGGACGGCGAGGCGAGCGTGAACCTCTACCGCGAAGCAGTCGGGCTGGATACCCATGTTGATGCG
GAGACGAGTGCGAATGTGCGCGCGACACTGCTGAGCTACAACGGTGACGATTGCCGTGCGACCGCCGCTGTGCGCTGGTG
GTTGAATGCGGGAGCACCTGGCGTGCCATTGTTGAACACAATGCTGCATTGA

Upstream 100 bases:

>100_bases
ATCGAATACGTGAGCCATTTTTATTGAGGGGCACAAACCATAAAACAGTGCCCAGTTCAATTCCACACTACCCGCGTTCG
TGCAATAAGCTGGAGAACTT

Downstream 100 bases:

>100_bases
TACTGTTACACGCGTGATGAATAACTGCGACGAGCACAGCTTGCTGCGCTTCCTCCGCTGGCGTGGCACCATGGTGGTGG
CTTGGCTGGTCCTTGCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: Nuclease; Nuclease-Like Protein; Nuclease RecB Family

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
METDTHLQPSDLVGCRYRQVQRRRFPNVSATENSQLRRERLLDARRAVFDLLPTKPQIGDPQHFLRLDLRPDYPARVNHE
DVWQTYLQTLEAIADQANIITGAVLIGESEGIAWHTELDALIRRPDGCYLPLLVSNHRVARPARNAADQAKTVRMIATAR
LGLGQAYKVATKLKHHSIDSFTLGLAAQALDSLGVGCRRALIIGQSSEQAFVLNTDYFQQGLTNALRATIPDLPRRVKEC
ASCRFVDLCGEQLRERDDLSLFLSGDRANPFRERGIDTVQGLIDARLGRPSELAAAWRAHIPVLAVTEHVDHERFDVEID
IDVEAYLDHGAYLWGAYDGDTYHPFVTWEPLGGQAEGENFARFWAWLMGRRYAAEQAGQTFGAFCYSAHGENHWLRFSAR
RFHGKVEGVPSEAEVLAFIQSGQWHDVFVAVKNNLVGPEGLGLKVVAPAAGFSWEANDVDGEASVNLYREAVGLDTHVDA
ETSANVRATLLSYNGDDCRATAAVRWWLNAGAPGVPLLNTMLH

Sequences:

>Translated_523_residues
METDTHLQPSDLVGCRYRQVQRRRFPNVSATENSQLRRERLLDARRAVFDLLPTKPQIGDPQHFLRLDLRPDYPARVNHE
DVWQTYLQTLEAIADQANIITGAVLIGESEGIAWHTELDALIRRPDGCYLPLLVSNHRVARPARNAADQAKTVRMIATAR
LGLGQAYKVATKLKHHSIDSFTLGLAAQALDSLGVGCRRALIIGQSSEQAFVLNTDYFQQGLTNALRATIPDLPRRVKEC
ASCRFVDLCGEQLRERDDLSLFLSGDRANPFRERGIDTVQGLIDARLGRPSELAAAWRAHIPVLAVTEHVDHERFDVEID
IDVEAYLDHGAYLWGAYDGDTYHPFVTWEPLGGQAEGENFARFWAWLMGRRYAAEQAGQTFGAFCYSAHGENHWLRFSAR
RFHGKVEGVPSEAEVLAFIQSGQWHDVFVAVKNNLVGPEGLGLKVVAPAAGFSWEANDVDGEASVNLYREAVGLDTHVDA
ETSANVRATLLSYNGDDCRATAAVRWWLNAGAPGVPLLNTMLH
>Mature_523_residues
METDTHLQPSDLVGCRYRQVQRRRFPNVSATENSQLRRERLLDARRAVFDLLPTKPQIGDPQHFLRLDLRPDYPARVNHE
DVWQTYLQTLEAIADQANIITGAVLIGESEGIAWHTELDALIRRPDGCYLPLLVSNHRVARPARNAADQAKTVRMIATAR
LGLGQAYKVATKLKHHSIDSFTLGLAAQALDSLGVGCRRALIIGQSSEQAFVLNTDYFQQGLTNALRATIPDLPRRVKEC
ASCRFVDLCGEQLRERDDLSLFLSGDRANPFRERGIDTVQGLIDARLGRPSELAAAWRAHIPVLAVTEHVDHERFDVEID
IDVEAYLDHGAYLWGAYDGDTYHPFVTWEPLGGQAEGENFARFWAWLMGRRYAAEQAGQTFGAFCYSAHGENHWLRFSAR
RFHGKVEGVPSEAEVLAFIQSGQWHDVFVAVKNNLVGPEGLGLKVVAPAAGFSWEANDVDGEASVNLYREAVGLDTHVDA
ETSANVRATLLSYNGDDCRATAAVRWWLNAGAPGVPLLNTMLH

Specific function: Unknown

COG id: COG2251

COG function: function code R; Predicted nuclease (RecB family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58223; Mature: 58223

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METDTHLQPSDLVGCRYRQVQRRRFPNVSATENSQLRRERLLDARRAVFDLLPTKPQIGD
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PQHFLRLDLRPDYPARVNHEDVWQTYLQTLEAIADQANIITGAVLIGESEGIAWHTELDA
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEHHHHH
LIRRPDGCYLPLLVSNHRVARPARNAADQAKTVRMIATARLGLGQAYKVATKLKHHSIDS
HHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH
FTLGLAAQALDSLGVGCRRALIIGQSSEQAFVLNTDYFQQGLTNALRATIPDLPRRVKEC
HHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHH
ASCRFVDLCGEQLRERDDLSLFLSGDRANPFRERGIDTVQGLIDARLGRPSELAAAWRAH
HCCEEHHHHHHHHCCCCCCEEEEECCCCCHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHC
IPVLAVTEHVDHERFDVEIDIDVEAYLDHGAYLWGAYDGDTYHPFVTWEPLGGQAEGENF
CCEEEEECCCCCCCEEEEEEEEHHEEECCCEEEEEECCCCCCCCEEEECCCCCCCCCCHH
ARFWAWLMGRRYAAEQAGQTFGAFCYSAHGENHWLRFSARRFHGKVEGVPSEAEVLAFIQ
HHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCEEEEEHHHHCCCCCCCCCHHHHEEEEC
SGQWHDVFVAVKNNLVGPEGLGLKVVAPAAGFSWEANDVDGEASVNLYREAVGLDTHVDA
CCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
ETSANVRATLLSYNGDDCRATAAVRWWLNAGAPGVPLLNTMLH
CCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHCC
>Mature Secondary Structure
METDTHLQPSDLVGCRYRQVQRRRFPNVSATENSQLRRERLLDARRAVFDLLPTKPQIGD
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PQHFLRLDLRPDYPARVNHEDVWQTYLQTLEAIADQANIITGAVLIGESEGIAWHTELDA
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEHHHHH
LIRRPDGCYLPLLVSNHRVARPARNAADQAKTVRMIATARLGLGQAYKVATKLKHHSIDS
HHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH
FTLGLAAQALDSLGVGCRRALIIGQSSEQAFVLNTDYFQQGLTNALRATIPDLPRRVKEC
HHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHH
ASCRFVDLCGEQLRERDDLSLFLSGDRANPFRERGIDTVQGLIDARLGRPSELAAAWRAH
HCCEEHHHHHHHHCCCCCCEEEEECCCCCHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHC
IPVLAVTEHVDHERFDVEIDIDVEAYLDHGAYLWGAYDGDTYHPFVTWEPLGGQAEGENF
CCEEEEECCCCCCCEEEEEEEEHHEEECCCEEEEEECCCCCCCCEEEECCCCCCCCCCHH
ARFWAWLMGRRYAAEQAGQTFGAFCYSAHGENHWLRFSARRFHGKVEGVPSEAEVLAFIQ
HHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCEEEEEHHHHCCCCCCCCCHHHHEEEEC
SGQWHDVFVAVKNNLVGPEGLGLKVVAPAAGFSWEANDVDGEASVNLYREAVGLDTHVDA
CCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
ETSANVRATLLSYNGDDCRATAAVRWWLNAGAPGVPLLNTMLH
CCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA