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The map label for this gene is ctaC

Identifier: 38234204

GI number: 38234204

Start: 1662439

End: 1663527

Strand: Reverse

Name: ctaC

Synonym: DIP1629

Alternate gene names: 38234204

Gene position: 1663527-1662439 (Counterclockwise)

Preceding gene: 38234206

Following gene: 38234203

Centisome position: 66.84

GC content: 51.61

Gene sequence:

>1089_bases
GTGGAACAGCAGGAAAAGCGTGGCACAGTCCGTAAGGCTCTGCTTGGCAGCGTCATCGGTTTTGGTGGCCTAGCTCTTGC
GGGTTGTGACGTTGAGGCTCCAGGTGGCCCATTGGGTACCGCTTTGGGATTCGGGTGGCCAAAGGGCATTACCCCAGAAG
CTACCTCGATGTACAACTTCTGGGTTTGGGTTTGGGTAACGGCATGGATTATCGGCTTTATCATGTGGGGCCTGTTTATC
TATGGCATGTTCTCGTGGAGCGCAAAGCGCGCAAAGAAAGCTGGCAAGGATGAATTCCCGCGCCAGACTCAGTACAACAT
CCCATTGGAGCTTGTACTGACCATCGTGCCAATCATCATTGTTATGGCATTGTTCTTCTTCACGGTGCAAACCCAGGACA
AAGTCACGGCAATGGACAAGGATCCAAAGGTTACCGTTGACGTCACCGGATACCAGTGGAACTGGAAGTTCGGATATGCA
AAGGTTGCCGGTGAGCTTTCCCCAACCGGTTCCGATTATGTTGGCACCGATGAGAAGCGTCAGGAAGCAGCTGAGAAGAC
CAAGTTTGATCAGGGCGGCGACAATCCGAACCCGATTAACGGTCGTTCCAAGACGGATACCTCTTACCTTCACTTCAACA
AGATTGAAACCTTGGGTACCTCTGAAGAAATTCCAGTTTTGGTTCTTCCTTCCAATACTCCAGTTGAATTCGATCTAGCT
TCTGCAGACGTATCTCACGCTTTCTGGGTTCCTGAGTTCCTCTTCAAGCGTGACGCATACAACCACCCAGAGCAGAACAA
GCAGCAGCGTAGGTTCCAGATCGAAAAGATTGAAAAAGAAGGCGCATTCGTGGGCCGCTGTGCAGAAATGTGCGGTACCT
ACCATGCAATGATGAACTTCGAAATCCGCGTTGTATCTCCTGAGAAATTTGCTCAGTACCTCAAGTTCCGTAACGATAAT
CCACAGGCAACCAACTCGGACGCATTGAAGTCGATCGGTGAGGCTCCATACGCAACCAGCACCCACCCATTCAACTCGGA
GCGCGCTACGCGTGACGGTGCGAACTTCGACGATACCGCTGCGGCGTAA

Upstream 100 bases:

>100_bases
TACATATAGATAGACCTCCGTGTGATTTTCTGCGCATTTACTGTGCGGGGGAGAGTGGTGGAGTGTCTCAAGAACTAGTG
CGACAGGAAGGCAAACGCGC

Downstream 100 bases:

>100_bases
TTAATAAGGAGAAGTAAGAGAACATGAAGGCTACATCAAAGATCATGTACTCGATGGCAACCTTCCTTGCCATCATGGCG
ATCATTTACCTCTTCGCCAC

Product: putative cytochrome C oxidase

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MEQQEKRGTVRKALLGSVIGFGGLALAGCDVEAPGGPLGTALGFGWPKGITPEATSMYNFWVWVWVTAWIIGFIMWGLFI
YGMFSWSAKRAKKAGKDEFPRQTQYNIPLELVLTIVPIIIVMALFFFTVQTQDKVTAMDKDPKVTVDVTGYQWNWKFGYA
KVAGELSPTGSDYVGTDEKRQEAAEKTKFDQGGDNPNPINGRSKTDTSYLHFNKIETLGTSEEIPVLVLPSNTPVEFDLA
SADVSHAFWVPEFLFKRDAYNHPEQNKQQRRFQIEKIEKEGAFVGRCAEMCGTYHAMMNFEIRVVSPEKFAQYLKFRNDN
PQATNSDALKSIGEAPYATSTHPFNSERATRDGANFDDTAAA

Sequences:

>Translated_362_residues
MEQQEKRGTVRKALLGSVIGFGGLALAGCDVEAPGGPLGTALGFGWPKGITPEATSMYNFWVWVWVTAWIIGFIMWGLFI
YGMFSWSAKRAKKAGKDEFPRQTQYNIPLELVLTIVPIIIVMALFFFTVQTQDKVTAMDKDPKVTVDVTGYQWNWKFGYA
KVAGELSPTGSDYVGTDEKRQEAAEKTKFDQGGDNPNPINGRSKTDTSYLHFNKIETLGTSEEIPVLVLPSNTPVEFDLA
SADVSHAFWVPEFLFKRDAYNHPEQNKQQRRFQIEKIEKEGAFVGRCAEMCGTYHAMMNFEIRVVSPEKFAQYLKFRNDN
PQATNSDALKSIGEAPYATSTHPFNSERATRDGANFDDTAAA
>Mature_362_residues
MEQQEKRGTVRKALLGSVIGFGGLALAGCDVEAPGGPLGTALGFGWPKGITPEATSMYNFWVWVWVTAWIIGFIMWGLFI
YGMFSWSAKRAKKAGKDEFPRQTQYNIPLELVLTIVPIIIVMALFFFTVQTQDKVTAMDKDPKVTVDVTGYQWNWKFGYA
KVAGELSPTGSDYVGTDEKRQEAAEKTKFDQGGDNPNPINGRSKTDTSYLHFNKIETLGTSEEIPVLVLPSNTPVEFDLA
SADVSHAFWVPEFLFKRDAYNHPEQNKQQRRFQIEKIEKEGAFVGRCAEMCGTYHAMMNFEIRVVSPEKFAQYLKFRNDN
PQATNSDALKSIGEAPYATSTHPFNSERATRDGANFDDTAAA

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family

Homologues:

Organism=Saccharomyces cerevisiae, GI6226540, Length=251, Percent_Identity=27.0916334661355, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COX2_CORDI (Q6NG98)

Other databases:

- EMBL:   BX248358
- RefSeq:   NP_939971.1
- ProteinModelPortal:   Q6NG98
- SMR:   Q6NG98
- GeneID:   2648675
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP1629
- NMPDR:   fig|257309.1.peg.1562
- HOGENOM:   HBG428789
- OMA:   YQWNWKF
- PhylomeDB:   Q6NG98
- ProtClustDB:   CLSK2518737
- BioCyc:   CDIP257309:DIP1629-MONOMER
- BRENDA:   1.9.3.1
- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- Gene3D:   G3DSA:1.10.287.90
- Gene3D:   G3DSA:2.60.40.420
- PANTHER:   PTHR22888
- PRINTS:   PR01166

Pfam domain/function: PF00116 COX2; SSF49503 Cupredoxin; SSF81464 Cyt_c_oxidase_II-like_TM

EC number: =1.9.3.1

Molecular weight: Translated: 40467; Mature: 40467

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00078 COX2; PS50857 COX2_CUA; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd5eb6a8)-; HASH(0x4527fef8)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQEKRGTVRKALLGSVIGFGGLALAGCDVEAPGGPLGTALGFGWPKGITPEATSMYNF
CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHH
WVWVWVTAWIIGFIMWGLFIYGMFSWSAKRAKKAGKDEFPRQTQYNIPLELVLTIVPIII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
VMALFFFTVQTQDKVTAMDKDPKVTVDVTGYQWNWKFGYAKVAGELSPTGSDYVGTDEKR
HHHHHHHHHCCCCCEEECCCCCEEEEEEECEEEEEEECHHHHCCCCCCCCCCCCCCCHHH
QEAAEKTKFDQGGDNPNPINGRSKTDTSYLHFNKIETLGTSEEIPVLVLPSNTPVEFDLA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECHHHHCCCCCCCCEEEECCCCCCEEEEC
SADVSHAFWVPEFLFKRDAYNHPEQNKQQRRFQIEKIEKEGAFVGRCAEMCGTYHAMMNF
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEE
EIRVVSPEKFAQYLKFRNDNPQATNSDALKSIGEAPYATSTHPFNSERATRDGANFDDTA
EEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA
CH
>Mature Secondary Structure
MEQQEKRGTVRKALLGSVIGFGGLALAGCDVEAPGGPLGTALGFGWPKGITPEATSMYNF
CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHH
WVWVWVTAWIIGFIMWGLFIYGMFSWSAKRAKKAGKDEFPRQTQYNIPLELVLTIVPIII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
VMALFFFTVQTQDKVTAMDKDPKVTVDVTGYQWNWKFGYAKVAGELSPTGSDYVGTDEKR
HHHHHHHHHCCCCCEEECCCCCEEEEEEECEEEEEEECHHHHCCCCCCCCCCCCCCCHHH
QEAAEKTKFDQGGDNPNPINGRSKTDTSYLHFNKIETLGTSEEIPVLVLPSNTPVEFDLA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECHHHHCCCCCCCCEEEECCCCCCEEEEC
SADVSHAFWVPEFLFKRDAYNHPEQNKQQRRFQIEKIEKEGAFVGRCAEMCGTYHAMMNF
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEE
EIRVVSPEKFAQYLKFRNDNPQATNSDALKSIGEAPYATSTHPFNSERATRDGANFDDTA
EEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA
CH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14602910