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The map label for this gene is yadR [C]

Identifier: 38234206

GI number: 38234206

Start: 1665967

End: 1666311

Strand: Reverse

Name: yadR [C]

Synonym: DIP1631

Alternate gene names: 38234206

Gene position: 1666311-1665967 (Counterclockwise)

Preceding gene: 38234211

Following gene: 38234204

Centisome position: 66.96

GC content: 51.59

Gene sequence:

>345_bases
ATGACTGCACCTGCTTCCAATACAGGCGTTATTTTGAGCGATGCTGCTGCTGCAAAAGCTAAAGCTTTGCTGGAGCAGGA
GGGTCGCACCGACCTTTCGCTGCGCATCGCGGTTCAGCCAGGTGGCTGCTCTGGTTTGCGTTACCAGCTTTATTTTGACG
ATCGTGACCTCGACGGAGATAAGGTCGATGAGGTCGGTGGCGTTCGTCTAGTCGTTGACAAAATGTCTGTGCCTTATCTT
GCTGGCGCGACGATCGACTTTGCTGACACGATTGAATCCCAGGGCTTTACCATTGATAACCCGAATGCCACAGGCTCTTG
CGCTTGTGGTGATTCATTTAACTAA

Upstream 100 bases:

>100_bases
CATTATGCGATCACGCACTAAGGTGCGATACCCTAGGTTCTACCCACGGTGTTTCACAATATTGTGCTACACCGGAGCTA
TAAAAATTTGAAGGAGAAAC

Downstream 100 bases:

>100_bases
ACGTAAATAAAAATTCCCGCTAGTTCTCCGTTGTTTTTCTAGGAGAACTAGCGGGATCTTTTTATATGGAGTTGCTGAGC
AAGCAATCGCCTATAGGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MTAPASNTGVILSDAAAAKAKALLEQEGRTDLSLRIAVQPGGCSGLRYQLYFDDRDLDGDKVDEVGGVRLVVDKMSVPYL
AGATIDFADTIESQGFTIDNPNATGSCACGDSFN

Sequences:

>Translated_114_residues
MTAPASNTGVILSDAAAAKAKALLEQEGRTDLSLRIAVQPGGCSGLRYQLYFDDRDLDGDKVDEVGGVRLVVDKMSVPYL
AGATIDFADTIESQGFTIDNPNATGSCACGDSFN
>Mature_113_residues
TAPASNTGVILSDAAAAKAKALLEQEGRTDLSLRIAVQPGGCSGLRYQLYFDDRDLDGDKVDEVGGVRLVVDKMSVPYLA
GATIDFADTIESQGFTIDNPNATGSCACGDSFN

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI160420328, Length=82, Percent_Identity=40.2439024390244, Blast_Score=68, Evalue=1e-12,
Organism=Homo sapiens, GI52426768, Length=109, Percent_Identity=31.1926605504587, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786351, Length=103, Percent_Identity=44.6601941747573, Blast_Score=97, Evalue=2e-22,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=40, Blast_Score=79, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=35.1851851851852, Blast_Score=65, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6323001, Length=104, Percent_Identity=33.6538461538462, Blast_Score=65, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24642263, Length=111, Percent_Identity=35.1351351351351, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 11906; Mature: 11775

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPASNTGVILSDAAAAKAKALLEQEGRTDLSLRIAVQPGGCSGLRYQLYFDDRDLDGD
CCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCC
KVDEVGGVRLVVDKMSVPYLAGATIDFADTIESQGFTIDNPNATGSCACGDSFN
CCCCCCCEEEEEECCCCCEECCCEECHHHHHCCCCCEEECCCCCCEEECCCCCC
>Mature Secondary Structure 
TAPASNTGVILSDAAAAKAKALLEQEGRTDLSLRIAVQPGGCSGLRYQLYFDDRDLDGD
CCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCC
KVDEVGGVRLVVDKMSVPYLAGATIDFADTIESQGFTIDNPNATGSCACGDSFN
CCCCCCCEEEEEECCCCCEECCCEECHHHHHCCCCCEEECCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 11681203 [H]