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The map label for this gene is ctaF

Identifier: 38234203

GI number: 38234203

Start: 1661984

End: 1662415

Strand: Reverse

Name: ctaF

Synonym: DIP1628

Alternate gene names: 38234203

Gene position: 1662415-1661984 (Counterclockwise)

Preceding gene: 38234204

Following gene: 38234202

Centisome position: 66.8

GC content: 49.07

Gene sequence:

>432_bases
ATGAAGGCTACATCAAAGATCATGTACTCGATGGCAACCTTCCTTGCCATCATGGCGATCATTTACCTCTTCGCCACCAT
GCACGTTGAAGACTCAGGCTATATGGTTGGCTACGAGTGGGCAGGCGGAGTCTGCATGATTTTGGGTACTTTGCTTACAG
TCATGCTGGGCGGATACCTTCACTTCACTGAGAACCGAATTGACGTTCTTCCTGAAGACTGGGAAGAGGCTGAAGTTGCT
GACGCTGCTGGCACATTGGGATTCTTCAGCCCAAGCTCCATCTGGCCATTGGCTATGAGTGGTGCAATTGCAGTGCTTGG
TTTCGGCATCGTTTACATGCACTACTGGTTGATTGCGATCGGTGCTGTTTTGTTGATCTACACGACCACCATGTTGAACC
TGCAGTACGGAATTCCTAAGGAAAAGCACTAA

Upstream 100 bases:

>100_bases
CAACCAGCACCCACCCATTCAACTCGGAGCGCGCTACGCGTGACGGTGCGAACTTCGACGATACCGCTGCGGCGTAATTA
ATAAGGAGAAGTAAGAGAAC

Downstream 100 bases:

>100_bases
GAGTTTTTCTTAACGCTAGTTCTGGCTAGTGTCATCCTCGGAAGAGGGGGCACTAGCCTTTTTCTATTTTCGTATAGTGA
CGAAATAGCATGAAGTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome aa3 subunit 4; Cytochrome c oxidase polypeptide IV

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKATSKIMYSMATFLAIMAIIYLFATMHVEDSGYMVGYEWAGGVCMILGTLLTVMLGGYLHFTENRIDVLPEDWEEAEVA
DAAGTLGFFSPSSIWPLAMSGAIAVLGFGIVYMHYWLIAIGAVLLIYTTTMLNLQYGIPKEKH

Sequences:

>Translated_143_residues
MKATSKIMYSMATFLAIMAIIYLFATMHVEDSGYMVGYEWAGGVCMILGTLLTVMLGGYLHFTENRIDVLPEDWEEAEVA
DAAGTLGFFSPSSIWPLAMSGAIAVLGFGIVYMHYWLIAIGAVLLIYTTTMLNLQYGIPKEKH
>Mature_143_residues
MKATSKIMYSMATFLAIMAIIYLFATMHVEDSGYMVGYEWAGGVCMILGTLLTVMLGGYLHFTENRIDVLPEDWEEAEVA
DAAGTLGFFSPSSIWPLAMSGAIAVLGFGIVYMHYWLIAIGAVLLIYTTTMLNLQYGIPKEKH

Specific function: Part of cytochrome c oxidase, its function is unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit CtaF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COX4_CORDI (Q6NG99)

Other databases:

- EMBL:   BX248358
- RefSeq:   NP_939970.1
- GeneID:   2648674
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP1628
- NMPDR:   fig|257309.1.peg.1561
- HOGENOM:   HBG566773
- OMA:   WEEAEVA
- ProtClustDB:   CLSK2518736
- BioCyc:   CDIP257309:DIP1628-MONOMER
- BRENDA:   1.9.3.1
- InterPro:   IPR021050

Pfam domain/function: PF12270 Cyt_c_ox_IV

EC number: =1.9.3.1

Molecular weight: Translated: 15776; Mature: 15776

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x45266020)-; HASH(0xd5e35a8)-; HASH(0xd5b96ec)-; HASH(0x4529a8f8)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATSKIMYSMATFLAIMAIIYLFATMHVEDSGYMVGYEWAGGVCMILGTLLTVMLGGYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHHHHHHHHHHCCHH
HFTENRIDVLPEDWEEAEVADAAGTLGFFSPSSIWPLAMSGAIAVLGFGIVYMHYWLIAI
EECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GAVLLIYTTTMLNLQYGIPKEKH
HHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure
MKATSKIMYSMATFLAIMAIIYLFATMHVEDSGYMVGYEWAGGVCMILGTLLTVMLGGYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHHHHHHHHHHCCHH
HFTENRIDVLPEDWEEAEVADAAGTLGFFSPSSIWPLAMSGAIAVLGFGIVYMHYWLIAI
EECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GAVLLIYTTTMLNLQYGIPKEKH
HHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14602910