| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is ppnK
Identifier: 38233771
GI number: 38233771
Start: 1178790
End: 1179743
Strand: Direct
Name: ppnK
Synonym: DIP1181
Alternate gene names: 38233771
Gene position: 1178790-1179743 (Clockwise)
Preceding gene: 38233770
Following gene: 38233772
Centisome position: 47.37
GC content: 48.74
Gene sequence:
>954_bases ATGACTATCGATTGCCATGAAGATCGCAGAGTTTTACTAGTTCCGCATACCGGAAGACCGCAAAATGTTGCTTCAGCTGC GCTAGCTGCCGAGCTTCTCGACGATTCAGGCGTCGGAGTTCGTGTTCTCGTTCCGGCCGAAGACACAACAGTTGCAACGC ATCCAGTTTTGGGACAATTTGAACGAGTTTCTCATTCTCCTCAAGCGACTCAAAGTGTTGATCTAGTACTGGTATTAGGC GGCGACGGTACATTTCTGCGTGCAGCTGATCTCGCCCATGGTGCTGATCTACCAGTGTTAGGTATCAACCTAGGACATGT CGGTTTTTTGGCTGAATGGGAGAAAGATTCCTTAGACGAAGCTGTCCGTAGAGTTACAAAAGGAAGTTTCAGAATTGAAG AACGTATGACTCTCGATGTCAGCGTTTACGATTCAAATGGTACTGCAATTGGTCGAGGGTGGGCTTTGAATGAAGTTAGT ATCGAAAATAGCAACCGAAGTGGTGTTTTGGATGCAACATTAGAAATTGATAGTCGGCCTGTAAGTTCATTTGGGTGTGA CGGCATCATAGTTTCAACACCTACGGGCTCGACCGCTTATGCTTTTTCCGCAGGTGGTCCCGTATTGTGGCCTGAACTAG ACGCAATTTTGGTCGTACCGAACAACGCACATGCACTATTCACCAAGCCACTAGTAGTAAGCCCCCGGTCATCTGTGGCA GTGGAATCGCATCCTAGCGCATTTCCTGCTACTGCTGTCATGGATGGATTCCGTTCGATTTCCGTCCCACCAGGTGCACG AGTAGAAGTCAAGCGCGGTTCTCGGTCGATTAAGTGGGTACGGTTGGATGACATCCCGTTCACGGACAGACTTGTCACGA AATTGCGACTGCCCGTAGAAGGGTGGAGGGGACCTAAGAACATGATTCCACAGATTAATCCCCATTCAGCGTAA
Upstream 100 bases:
>100_bases AATATTTCCTCTGGCTAAAAAAGGATTCAGGTAGGTCTGCTAAGGGGTTACATGAGATTCATGAAAAAGTCGCGGAAGCA GTCCAGAAAGGTCCGCAGTA
Downstream 100 bases:
>100_bases CTTTCGCCAGTATTTAGTTGGCGATTGGTGAAAAATGCTGTGGCAGAAAATTTGATATTCGAACACAATAGAACACCTGT TCCTTAATCGGATGATTTTG
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTIDCHEDRRVLLVPHTGRPQNVASAALAAELLDDSGVGVRVLVPAEDTTVATHPVLGQFERVSHSPQATQSVDLVLVLG GDGTFLRAADLAHGADLPVLGINLGHVGFLAEWEKDSLDEAVRRVTKGSFRIEERMTLDVSVYDSNGTAIGRGWALNEVS IENSNRSGVLDATLEIDSRPVSSFGCDGIIVSTPTGSTAYAFSAGGPVLWPELDAILVVPNNAHALFTKPLVVSPRSSVA VESHPSAFPATAVMDGFRSISVPPGARVEVKRGSRSIKWVRLDDIPFTDRLVTKLRLPVEGWRGPKNMIPQINPHSA
Sequences:
>Translated_317_residues MTIDCHEDRRVLLVPHTGRPQNVASAALAAELLDDSGVGVRVLVPAEDTTVATHPVLGQFERVSHSPQATQSVDLVLVLG GDGTFLRAADLAHGADLPVLGINLGHVGFLAEWEKDSLDEAVRRVTKGSFRIEERMTLDVSVYDSNGTAIGRGWALNEVS IENSNRSGVLDATLEIDSRPVSSFGCDGIIVSTPTGSTAYAFSAGGPVLWPELDAILVVPNNAHALFTKPLVVSPRSSVA VESHPSAFPATAVMDGFRSISVPPGARVEVKRGSRSIKWVRLDDIPFTDRLVTKLRLPVEGWRGPKNMIPQINPHSA >Mature_316_residues TIDCHEDRRVLLVPHTGRPQNVASAALAAELLDDSGVGVRVLVPAEDTTVATHPVLGQFERVSHSPQATQSVDLVLVLGG DGTFLRAADLAHGADLPVLGINLGHVGFLAEWEKDSLDEAVRRVTKGSFRIEERMTLDVSVYDSNGTAIGRGWALNEVSI ENSNRSGVLDATLEIDSRPVSSFGCDGIIVSTPTGSTAYAFSAGGPVLWPELDAILVVPNNAHALFTKPLVVSPRSSVAV ESHPSAFPATAVMDGFRSISVPPGARVEVKRGSRSIKWVRLDDIPFTDRLVTKLRLPVEGWRGPKNMIPQINPHSA
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Homo sapiens, GI55743112, Length=189, Percent_Identity=31.7460317460317, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1788968, Length=232, Percent_Identity=32.7586206896552, Blast_Score=120, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6322509, Length=207, Percent_Identity=30.9178743961353, Blast_Score=89, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6320794, Length=174, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6325068, Length=172, Percent_Identity=29.6511627906977, Blast_Score=82, Evalue=8e-17, Organism=Drosophila melanogaster, GI28573832, Length=181, Percent_Identity=34.2541436464088, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI161077047, Length=181, Percent_Identity=34.2541436464088, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI28573830, Length=181, Percent_Identity=34.2541436464088, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573828, Length=181, Percent_Identity=34.2541436464088, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573826, Length=181, Percent_Identity=34.2541436464088, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK_CORDI (Q6NHF7)
Other databases:
- EMBL: BX248357 - RefSeq: NP_939538.1 - ProteinModelPortal: Q6NHF7 - SMR: Q6NHF7 - GeneID: 2649736 - GenomeReviews: BX248353_GR - KEGG: cdi:DIP1181 - NMPDR: fig|257309.1.peg.1129 - HOGENOM: HBG713904 - OMA: FLERIRN - PhylomeDB: Q6NHF7 - ProtClustDB: PRK03372 - BioCyc: CDIP257309:DIP1181-MONOMER - BRENDA: 2.7.1.23 - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 33897; Mature: 33766
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDCHEDRRVLLVPHTGRPQNVASAALAAELLDDSGVGVRVLVPAEDTTVATHPVLGQF CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCHHHH ERVSHSPQATQSVDLVLVLGGDGTFLRAADLAHGADLPVLGINLGHVGFLAEWEKDSLDE HHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCHHH AVRRVTKGSFRIEERMTLDVSVYDSNGTAIGRGWALNEVSIENSNRSGVLDATLEIDSRP HHHHHHCCCEEEEEEEEEEEEEECCCCCEEECCEEEEEEEEECCCCCCEEEEEEEECCCC VSSFGCDGIIVSTPTGSTAYAFSAGGPVLWPELDAILVVPNNAHALFTKPLVVSPRSSVA CCCCCCCEEEEECCCCCEEEEEECCCCEECCCCCEEEEECCCCCEEEECCEEECCCCCEE VESHPSAFPATAVMDGFRSISVPPGARVEVKRGSRSIKWVRLDDIPFTDRLVTKLRLPVE ECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHEECCHH GWRGPKNMIPQINPHSA CCCCHHHCCCCCCCCCC >Mature Secondary Structure TIDCHEDRRVLLVPHTGRPQNVASAALAAELLDDSGVGVRVLVPAEDTTVATHPVLGQF CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCHHHH ERVSHSPQATQSVDLVLVLGGDGTFLRAADLAHGADLPVLGINLGHVGFLAEWEKDSLDE HHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCHHH AVRRVTKGSFRIEERMTLDVSVYDSNGTAIGRGWALNEVSIENSNRSGVLDATLEIDSRP HHHHHHCCCEEEEEEEEEEEEEECCCCCEEECCEEEEEEEEECCCCCCEEEEEEEECCCC VSSFGCDGIIVSTPTGSTAYAFSAGGPVLWPELDAILVVPNNAHALFTKPLVVSPRSSVA CCCCCCCEEEEECCCCCEEEEEECCCCEECCCCCEEEEECCCCCEEEECCEEECCCCCEE VESHPSAFPATAVMDGFRSISVPPGARVEVKRGSRSIKWVRLDDIPFTDRLVTKLRLPVE ECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHEECCHH GWRGPKNMIPQINPHSA CCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14602910